RNA–Protein interactions for RNA: ENST00000337908.4

MS4A4A-201, Transcript of membrane spanning 4-domains A4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MS4A4A, Length 1,604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-201ENST00000337908 LYPD5Q6UWN5 251 aa7.52□□□□□ -1.21
MS4A4A-201ENST00000337908 COL6A5A8TX70 2615 aa7.52□□□□□ -1.21
MS4A4A-201ENST00000337908 LINC00959A0A1B0GUT2 108 aa7.51□□□□□ -1.21
MS4A4A-201ENST00000337908 TSPEAR-AS2P59090 65 aa7.51□□□□□ -1.21
MS4A4A-201ENST00000337908 COX6A2Q02221 97 aa7.51□□□□□ -1.21
MS4A4A-201ENST00000337908 C15orf53Q8NAA6 179 aa7.51□□□□□ -1.21
MS4A4A-201ENST00000337908 B9D2Q9BPU9 175 aa7.51□□□□□ -1.21
MS4A4A-201ENST00000337908 CEND1Q8N111 149 aa7.5□□□□□ -1.21
MS4A4A-201ENST00000337908 NDUFA12Q9UI09 145 aa7.5□□□□□ -1.21
MS4A4A-201ENST00000337908 TMEM238C9JI98 176 aa7.49□□□□□ -1.21
MS4A4A-201ENST00000337908 CLPSL2Q6UWE3 100 aa7.49□□□□□ -1.21
MS4A4A-201ENST00000337908 LINC00269Q8N2A0 174 aa7.49□□□□□ -1.21
MS4A4A-201ENST00000337908 TMEM238LA0A1B0GVL6 79 aa7.49□□□□□ -1.21
MS4A4A-201ENST00000337908 A6NJY4 79 aa7.49□□□□□ -1.21
MS4A4A-201ENST00000337908 CRPP02741 224 aa7.49□□□□□ -1.21
MS4A4A-201ENST00000337908 ZFAND6Q6FIF0 208 aa7.49□□□□□ -1.21
MS4A4A-201ENST00000337908 SMIM1B2RUZ4 78 aa7.48□□□□□ -1.21
MS4A4A-201ENST00000337908 XCL1P47992 114 aa7.48□□□□□ -1.21
MS4A4A-201ENST00000337908 REG3AQ06141 175 aa7.48□□□□□ -1.21
MS4A4A-201ENST00000337908 CIRBPQ14011 172 aaKnown RBP7.48□□□□□ -1.21
MS4A4A-201ENST00000337908 SPANXB1Q9NS25 103 aaPredicted RBP7.48□□□□□ -1.21
MS4A4A-201ENST00000337908 TRRAPQ9Y4A5 3859 aa7.47□□□□□ -1.21
MS4A4A-201ENST00000337908 IGLV5-39A0A0G2JS06 123 aa7.47□□□□□ -1.21
MS4A4A-201ENST00000337908 A0A1B0GV90 55 aa7.47□□□□□ -1.21
MS4A4A-201ENST00000337908 NDUFA1O15239 70 aa7.47□□□□□ -1.21
MS4A4A-201ENST00000337908 NBEAL2Q6ZNJ1 2754 aa7.47□□□□□ -1.21
MS4A4A-201ENST00000337908 A0A0J9YXY3 114 aa7.46□□□□□ -1.21
MS4A4A-201ENST00000337908 IGHV3-30P01768 117 aa7.46□□□□□ -1.21
MS4A4A-201ENST00000337908 IGHV3-33P01772 117 aa7.46□□□□□ -1.21
MS4A4A-201ENST00000337908 NHLRC4P0CG21 123 aaPredicted RBP7.46□□□□□ -1.21
MS4A4A-201ENST00000337908 IGHV3-30-5P0DP03 117 aa7.46□□□□□ -1.21
MS4A4A-201ENST00000337908 TM2D2Q9BX73 214 aa7.46□□□□□ -1.21
MS4A4A-201ENST00000337908 TOMM7Q9P0U1 55 aa7.46□□□□□ -1.21
MS4A4A-201ENST00000337908 A0A087WZ39 114 aa7.45□□□□□ -1.22
MS4A4A-201ENST00000337908 IGHV3OR16-9A0A0B4J2B5 98 aa7.45□□□□□ -1.22
MS4A4A-201ENST00000337908 PRSS2P07478 247 aa7.45□□□□□ -1.22
MS4A4A-201ENST00000337908 SMIM13P0DJ93 91 aa7.45□□□□□ -1.22
MS4A4A-201ENST00000337908 HERV-K104P63124 156 aa7.45□□□□□ -1.22
MS4A4A-201ENST00000337908 C5orf38Q86SI9 138 aa7.45□□□□□ -1.22
MS4A4A-201ENST00000337908 COX7B2Q8TF08 81 aa7.45□□□□□ -1.22
MS4A4A-201ENST00000337908 KLK12Q9UKR0 248 aa7.45□□□□□ -1.22
MS4A4A-201ENST00000337908 COX7A2LO14548 114 aa7.45□□□□□ -1.22
MS4A4A-201ENST00000337908 MALP21145 153 aa7.45□□□□□ -1.22
MS4A4A-201ENST00000337908 ESRGQ1W209 222 aa7.45□□□□□ -1.22
MS4A4A-201ENST00000337908 SFTA2Q6UW10 78 aa7.45□□□□□ -1.22
MS4A4A-201ENST00000337908 CD164L2Q6UWJ8 174 aa7.45□□□□□ -1.22
MS4A4A-201ENST00000337908 LINC01561Q8N1V8 128 aa7.45□□□□□ -1.22
MS4A4A-201ENST00000337908 CHCHD10Q8WYQ3 142 aaPredicted RBP7.45□□□□□ -1.22
MS4A4A-201ENST00000337908 Q9H8V8 135 aa7.45□□□□□ -1.22
MS4A4A-201ENST00000337908 NHP2Q9NX24 153 aaKnown RBP7.45□□□□□ -1.22
MS4A4A-201ENST00000337908 IGLL5B9A064 214 aa7.44□□□□□ -1.22
MS4A4A-201ENST00000337908 FXYD2P54710 66 aa7.44□□□□□ -1.22
MS4A4A-201ENST00000337908 CCL18P55774 89 aa7.44□□□□□ -1.22
MS4A4A-201ENST00000337908 KRTAP21-3Q3LHN1 58 aa7.44□□□□□ -1.22
MS4A4A-201ENST00000337908 MEIG1Q5JSS6 88 aa7.44□□□□□ -1.22
MS4A4A-201ENST00000337908 WFDC10BQ8IUB3 73 aa7.44□□□□□ -1.22
MS4A4A-201ENST00000337908 C10orf126Q8N4M7 172 aa7.44□□□□□ -1.22
MS4A4A-201ENST00000337908 PKD1L1Q8TDX9 2849 aa7.43□□□□□ -1.22
MS4A4A-201ENST00000337908 IGLV10-54A0A075B6I4 117 aa7.43□□□□□ -1.22
MS4A4A-201ENST00000337908 TRAV8-4A0A0B4J246 113 aa7.43□□□□□ -1.22
MS4A4A-201ENST00000337908 TIMM17BO60830 172 aa7.43□□□□□ -1.22
MS4A4A-201ENST00000337908 RPL24P83731 157 aaKnown RBP7.43□□□□□ -1.22
MS4A4A-201ENST00000337908 Q6ZVH6 145 aa7.43□□□□□ -1.22
MS4A4A-201ENST00000337908 Q8N3U1 123 aa7.43□□□□□ -1.22
MS4A4A-201ENST00000337908 COPS9Q8WXC6 57 aa7.43□□□□□ -1.22
MS4A4A-201ENST00000337908 APOMO95445 188 aa7.42□□□□□ -1.22
MS4A4A-201ENST00000337908 CFAP161Q6P656 301 aa7.42□□□□□ -1.22
MS4A4A-201ENST00000337908 UBE2WQ96B02 151 aa7.42□□□□□ -1.22
MS4A4A-201ENST00000337908 COX11Q9Y6N1 276 aa7.42□□□□□ -1.22
MS4A4A-201ENST00000337908 MIAQ16674 131 aa7.41□□□□□ -1.22
MS4A4A-201ENST00000337908 C6orf226Q5I0X4 101 aa7.41□□□□□ -1.22
MS4A4A-201ENST00000337908 RAB37Q96AX2 223 aa7.41□□□□□ -1.22
MS4A4A-201ENST00000337908 SPANXDQ9BXN6 97 aa7.41□□□□□ -1.22
MS4A4A-201ENST00000337908 PRR34Q9NV39 138 aa7.41□□□□□ -1.22
MS4A4A-201ENST00000337908 SPANXCQ9NY87 97 aa7.41□□□□□ -1.22
MS4A4A-201ENST00000337908 GAGE12HA6NDE8 117 aa7.41□□□□□ -1.22
MS4A4A-201ENST00000337908 TAX1BP3O14907 124 aa7.41□□□□□ -1.22
MS4A4A-201ENST00000337908 LINC01556Q5JQF7 62 aa7.41□□□□□ -1.22
MS4A4A-201ENST00000337908 ZNF625Q96I27 306 aaPredicted RBP7.41□□□□□ -1.22
MS4A4A-201ENST00000337908 CMYA5Q8N3K9 4069 aa7.4□□□□□ -1.22
MS4A4A-201ENST00000337908 IFITM1P13164 125 aa7.4□□□□□ -1.22
MS4A4A-201ENST00000337908 Q8IZM0 81 aa7.4□□□□□ -1.22
MS4A4A-201ENST00000337908 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.39□□□□□ -1.23
MS4A4A-201ENST00000337908 C9orf118A6NHY6 69 aa7.39□□□□□ -1.23
MS4A4A-201ENST00000337908 K7EP13 123 aa7.39□□□□□ -1.23
MS4A4A-201ENST00000337908 CXCL5P42830 114 aa7.39□□□□□ -1.23
MS4A4A-201ENST00000337908 CKS1BP61024 79 aa7.39□□□□□ -1.23
MS4A4A-201ENST00000337908 VAMP3Q15836 100 aa7.39□□□□□ -1.23
MS4A4A-201ENST00000337908 ENHOQ6UWT2 76 aa7.39□□□□□ -1.23
MS4A4A-201ENST00000337908 MUSTN1Q8IVN3 82 aa7.39□□□□□ -1.23
MS4A4A-201ENST00000337908 ANK2Q01484 3957 aa7.39□□□□□ -1.23
MS4A4A-201ENST00000337908 FOXI1Q12951 378 aa7.38□□□□□ -1.23
MS4A4A-201ENST00000337908 K7ERJ3 54 aa7.38□□□□□ -1.23
MS4A4A-201ENST00000337908 DNAH10OSP0CZ25 163 aa7.38□□□□□ -1.23
MS4A4A-201ENST00000337908 LITAFQ99732 161 aa7.38□□□□□ -1.23
MS4A4A-201ENST00000337908 C1orf43Q9BWL3 253 aa7.38□□□□□ -1.23
MS4A4A-201ENST00000337908 KLK5Q9Y337 293 aaPredicted RBP7.38□□□□□ -1.23
MS4A4A-201ENST00000337908 LINC00588Q9Y4M8 146 aa7.38□□□□□ -1.23
MS4A4A-201ENST00000337908 DNAH3Q8TD57 4116 aa7.37□□□□□ -1.23
MS4A4A-201ENST00000337908 A0A0U1RRA0 63 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms