RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 CLEC2BQ92478 149 aa16.58■□□□□ 0.24
NDEL1-201ENST00000334527 F5H768 121 aa16.57■□□□□ 0.24
NDEL1-201ENST00000334527 PLA2G2AP14555 144 aa16.57■□□□□ 0.24
NDEL1-201ENST00000334527 PRIMA1Q86XR5 153 aa16.57■□□□□ 0.24
NDEL1-201ENST00000334527 LINC01600Q96MT4 127 aa16.57■□□□□ 0.24
NDEL1-201ENST00000334527 TRGV4A0A0C4DH28 118 aa16.56■□□□□ 0.24
NDEL1-201ENST00000334527 TRBV6-4A0A1B0GX49 114 aa16.56■□□□□ 0.24
NDEL1-201ENST00000334527 TMEM262E9PQX1 116 aa16.55■□□□□ 0.24
NDEL1-201ENST00000334527 OVOL2Q9BRP0 275 aa16.55■□□□□ 0.24
NDEL1-201ENST00000334527 MEIG1Q5JSS6 88 aa16.55■□□□□ 0.24
NDEL1-201ENST00000334527 ACANP16112 2415 aa16.54■□□□□ 0.24
NDEL1-201ENST00000334527 H7C423 109 aa16.54■□□□□ 0.24
NDEL1-201ENST00000334527 TEX49A0A1B0GTD5 131 aa16.53■□□□□ 0.24
NDEL1-201ENST00000334527 C2orf82Q6UX34 121 aa16.53■□□□□ 0.24
NDEL1-201ENST00000334527 CIDEAO60543 219 aa16.53■□□□□ 0.24
NDEL1-201ENST00000334527 LST1O00453 97 aa16.52■□□□□ 0.24
NDEL1-201ENST00000334527 SOSTDC1Q6X4U4 206 aa16.52■□□□□ 0.24
NDEL1-201ENST00000334527 COPS9Q8WXC6 57 aa16.51■□□□□ 0.23
NDEL1-201ENST00000334527 C2CD3Q4AC94 2353 aa16.51■□□□□ 0.23
NDEL1-201ENST00000334527 ANK3Q12955 4377 aaKnown RBP16.5■□□□□ 0.23
NDEL1-201ENST00000334527 HERV-K104P63124 156 aa16.5■□□□□ 0.23
NDEL1-201ENST00000334527 UBE2WQ96B02 151 aa16.5■□□□□ 0.23
NDEL1-201ENST00000334527 MTORP42345 2549 aa16.5■□□□□ 0.23
NDEL1-201ENST00000334527 GAGE6Q13070 117 aa16.5■□□□□ 0.23
NDEL1-201ENST00000334527 H3BT86 120 aa16.49■□□□□ 0.23
NDEL1-201ENST00000334527 A0A1B0GV72 72 aa16.49■□□□□ 0.23
NDEL1-201ENST00000334527 HILS1P60008 231 aa16.49■□□□□ 0.23
NDEL1-201ENST00000334527 FHL2Q14192 279 aa16.49■□□□□ 0.23
NDEL1-201ENST00000334527 IGKV3OR2-268A0A0C4DH90 116 aa16.47■□□□□ 0.23
NDEL1-201ENST00000334527 CKS1BP61024 79 aa16.46■□□□□ 0.23
NDEL1-201ENST00000334527 TRBV6-8A0A0A6YYG3 113 aa16.45■□□□□ 0.22
NDEL1-201ENST00000334527 IGLV4-60A0A075B6I1 120 aa16.45■□□□□ 0.22
NDEL1-201ENST00000334527 CHCHD5Q9BSY4 110 aa16.44■□□□□ 0.22
NDEL1-201ENST00000334527 ITPR2Q14571 2701 aa16.44■□□□□ 0.22
NDEL1-201ENST00000334527 COX7B2Q8TF08 81 aa16.43■□□□□ 0.22
NDEL1-201ENST00000334527 TRAV8-4A0A0B4J246 113 aa16.43■□□□□ 0.22
NDEL1-201ENST00000334527 COX7A2LO14548 114 aa16.42■□□□□ 0.22
NDEL1-201ENST00000334527 DEFB130BP0DP73 79 aa16.42■□□□□ 0.22
NDEL1-201ENST00000334527 DEFB130AP0DP74 79 aa16.42■□□□□ 0.22
NDEL1-201ENST00000334527 SHISA2Q6UWI4 295 aa16.42■□□□□ 0.22
NDEL1-201ENST00000334527 TOMM7Q9P0U1 55 aa16.42■□□□□ 0.22
NDEL1-201ENST00000334527 PF4P02776 101 aa16.39■□□□□ 0.21
NDEL1-201ENST00000334527 KRTAP10-3P60369 221 aa16.39■□□□□ 0.21
NDEL1-201ENST00000334527 CRLF1O75462 422 aa16.38■□□□□ 0.21
NDEL1-201ENST00000334527 SMR3AQ99954 134 aa16.38■□□□□ 0.21
NDEL1-201ENST00000334527 PPDPFQ9H3Y8 114 aa16.38■□□□□ 0.21
NDEL1-201ENST00000334527 IGHV3OR16-9A0A0B4J2B5 98 aa16.37■□□□□ 0.21
NDEL1-201ENST00000334527 CITED1Q99966 193 aa16.37■□□□□ 0.21
NDEL1-201ENST00000334527 MIR7-3HGQ8N6C7 128 aa16.36■□□□□ 0.21
NDEL1-201ENST00000334527 KIR2DL5BQ8NHK3 375 aa16.36■□□□□ 0.21
NDEL1-201ENST00000334527 SNCGO76070 127 aa16.35■□□□□ 0.21
NDEL1-201ENST00000334527 LINC00482Q8N8I6 264 aa16.35■□□□□ 0.21
NDEL1-201ENST00000334527 J3QKU1 62 aa16.34■□□□□ 0.21
NDEL1-201ENST00000334527 GYPEP15421 78 aa16.33■□□□□ 0.2
NDEL1-201ENST00000334527 A0A087WZ39 114 aa16.33■□□□□ 0.2
NDEL1-201ENST00000334527 DEFB121Q5J5C9 76 aa16.33■□□□□ 0.2
NDEL1-201ENST00000334527 C5orf38Q86SI9 138 aa16.33■□□□□ 0.2
NDEL1-201ENST00000334527 LINC00612Q8N6U2 182 aa16.33■□□□□ 0.2
NDEL1-201ENST00000334527 LINC00158P58513 81 aa16.32■□□□□ 0.2
NDEL1-201ENST00000334527 TRAV13-2A0A0B4J235 113 aa16.31■□□□□ 0.2
NDEL1-201ENST00000334527 LINC00959A0A1B0GUT2 108 aa16.31■□□□□ 0.2
NDEL1-201ENST00000334527 SND1-IT1Q9HBX3 110 aa16.31■□□□□ 0.2
NDEL1-201ENST00000334527 CRPP02741 224 aa16.3■□□□□ 0.2
NDEL1-201ENST00000334527 X6R8D5 127 aa16.3■□□□□ 0.2
NDEL1-201ENST00000334527 UNC79Q9P2D8 2635 aa16.3■□□□□ 0.2
NDEL1-201ENST00000334527 TRACP01848 142 aa16.29■□□□□ 0.2
NDEL1-201ENST00000334527 FAM222AQ5U5X8 452 aa16.29■□□□□ 0.2
NDEL1-201ENST00000334527 C15orf53Q8NAA6 179 aa16.29■□□□□ 0.2
NDEL1-201ENST00000334527 IGKV2-28A0A075B6P5 120 aa16.28■□□□□ 0.2
NDEL1-201ENST00000334527 IGKV2D-28P01615 120 aa16.28■□□□□ 0.2
NDEL1-201ENST00000334527 LINC00337Q8N6G1 96 aa16.28■□□□□ 0.2
NDEL1-201ENST00000334527 GAGE2BQ13066 116 aa16.28■□□□□ 0.2
NDEL1-201ENST00000334527 GAGE2EQ4V326 116 aa16.28■□□□□ 0.2
NDEL1-201ENST00000334527 FAM218AQ96MZ4 157 aa16.28■□□□□ 0.2
NDEL1-201ENST00000334527 GAGE2DQ9UEU5 116 aa16.28■□□□□ 0.2
NDEL1-201ENST00000334527 HIVEP2P31629 2446 aa16.27■□□□□ 0.19
NDEL1-201ENST00000334527 FAM240AA0A1B0GVK7 77 aa16.27■□□□□ 0.19
NDEL1-201ENST00000334527 IBA57-AS1B1ANH7 110 aa16.27■□□□□ 0.19
NDEL1-201ENST00000334527 PFN2P35080 140 aa16.26■□□□□ 0.19
NDEL1-201ENST00000334527 RPL28P46779 137 aaKnown RBP16.26■□□□□ 0.19
NDEL1-201ENST00000334527 CCL18P55774 89 aa16.25■□□□□ 0.19
NDEL1-201ENST00000334527 PRO0255Q9UI72 69 aa16.25■□□□□ 0.19
NDEL1-201ENST00000334527 GCN1Q92616 2671 aaKnown RBP16.25■□□□□ 0.19
NDEL1-201ENST00000334527 HELZ2Q9BYK8 2649 aaKnown RBP16.25■□□□□ 0.19
NDEL1-201ENST00000334527 FN1P02751 2386 aaKnown RBP16.25■□□□□ 0.19
NDEL1-201ENST00000334527 A0A096LPF7 62 aa16.24■□□□□ 0.19
NDEL1-201ENST00000334527 XCL1P47992 114 aa16.24■□□□□ 0.19
NDEL1-201ENST00000334527 SMIM9A6NGZ8 99 aa16.24■□□□□ 0.19
NDEL1-201ENST00000334527 ANAPC13Q9BS18 74 aa16.24■□□□□ 0.19
NDEL1-201ENST00000334527 C11orf68Q9H3H3 251 aaKnown RBP16.24■□□□□ 0.19
NDEL1-201ENST00000334527 BAALC-AS2P0C853 105 aa16.23■□□□□ 0.19
NDEL1-201ENST00000334527 TTC32Q5I0X7 151 aa16.23■□□□□ 0.19
NDEL1-201ENST00000334527 SPATA3Q8NHX4 192 aa16.23■□□□□ 0.19
NDEL1-201ENST00000334527 A0A1B0GUV1 79 aa16.22■□□□□ 0.19
NDEL1-201ENST00000334527 SS18Q15532 418 aa16.22■□□□□ 0.19
NDEL1-201ENST00000334527 C6orf226Q5I0X4 101 aa16.22■□□□□ 0.19
NDEL1-201ENST00000334527 CLPSL2Q6UWE3 100 aa16.22■□□□□ 0.19
NDEL1-201ENST00000334527 FASNP49327 2511 aaKnown RBP16.21■□□□□ 0.19
NDEL1-201ENST00000334527 NBEAL2Q6ZNJ1 2754 aa16.21■□□□□ 0.19
NDEL1-201ENST00000334527 LY6G6DO95868 133 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms