RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 A0A0J9YXY3 114 aa6.33□□□□□ -1.4
TREM1-202ENST00000334475 WFDC9Q8NEX5 89 aa6.33□□□□□ -1.4
TREM1-202ENST00000334475 SPANXDQ9BXN6 97 aa6.33□□□□□ -1.4
TREM1-202ENST00000334475 CDC42SE2Q9NRR3 84 aa6.33□□□□□ -1.4
TREM1-202ENST00000334475 SPANXCQ9NY87 97 aa6.33□□□□□ -1.4
TREM1-202ENST00000334475 NDUFA12Q9UI09 145 aa6.33□□□□□ -1.4
TREM1-202ENST00000334475 X6R8D5 127 aa6.33□□□□□ -1.4
TREM1-202ENST00000334475 A0A0B4J2C4 111 aa6.32□□□□□ -1.4
TREM1-202ENST00000334475 IGLV5-39A0A0G2JS06 123 aa6.32□□□□□ -1.4
TREM1-202ENST00000334475 NDUFA1O15239 70 aa6.32□□□□□ -1.4
TREM1-202ENST00000334475 RNASE13Q5GAN3 156 aaKnown RBP6.32□□□□□ -1.4
TREM1-202ENST00000334475 C10orf126Q8N4M7 172 aa6.32□□□□□ -1.4
TREM1-202ENST00000334475 RNF183Q96D59 192 aa6.32□□□□□ -1.4
TREM1-202ENST00000334475 NAA38Q9BRA0 125 aaKnown RBP6.32□□□□□ -1.4
TREM1-202ENST00000334475 KRTAP9-2Q9BYQ4 174 aa6.32□□□□□ -1.4
TREM1-202ENST00000334475 IGHV3-64A0A075B6Q5 118 aa6.31□□□□□ -1.4
TREM1-202ENST00000334475 TRBV6-8A0A0A6YYG3 113 aa6.31□□□□□ -1.4
TREM1-202ENST00000334475 TRAV8-3A0A0A6YYJ7 113 aa6.31□□□□□ -1.4
TREM1-202ENST00000334475 K7ERU9 68 aa6.31□□□□□ -1.4
TREM1-202ENST00000334475 IFITM1P13164 125 aa6.31□□□□□ -1.4
TREM1-202ENST00000334475 LINC00242Q5T6M2 205 aa6.31□□□□□ -1.4
TREM1-202ENST00000334475 CDKN2A-AS1Q9UH64 79 aa6.31□□□□□ -1.4
TREM1-202ENST00000334475 DYNC2H1Q8NCM8 4307 aaKnown RBP6.31□□□□□ -1.4
TREM1-202ENST00000334475 F8W1H4 67 aa6.3□□□□□ -1.4
TREM1-202ENST00000334475 SPINK8P0C7L1 97 aa6.3□□□□□ -1.4
TREM1-202ENST00000334475 MIFP14174 115 aa6.3□□□□□ -1.4
TREM1-202ENST00000334475 COPS9Q8WXC6 57 aa6.3□□□□□ -1.4
TREM1-202ENST00000334475 PPDPFQ9H3Y8 114 aa6.3□□□□□ -1.4
TREM1-202ENST00000334475 PRO1854Q9UHT4 67 aa6.3□□□□□ -1.4
TREM1-202ENST00000334475 PRO0255Q9UI72 69 aa6.3□□□□□ -1.4
TREM1-202ENST00000334475 TRBV20-1A0A075B6N2 111 aa6.29□□□□□ -1.4
TREM1-202ENST00000334475 A4D1N5 150 aa6.29□□□□□ -1.4
TREM1-202ENST00000334475 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.29□□□□□ -1.4
TREM1-202ENST00000334475 APOMO95445 188 aa6.29□□□□□ -1.4
TREM1-202ENST00000334475 TSPAN13O95857 204 aa6.29□□□□□ -1.4
TREM1-202ENST00000334475 CFC1BP0CG36 223 aa6.29□□□□□ -1.4
TREM1-202ENST00000334475 CFC1P0CG37 223 aa6.29□□□□□ -1.4
TREM1-202ENST00000334475 HERV-K104P63124 156 aa6.29□□□□□ -1.4
TREM1-202ENST00000334475 CIRBPQ14011 172 aaKnown RBP6.29□□□□□ -1.4
TREM1-202ENST00000334475 MIAQ16674 131 aa6.29□□□□□ -1.4
TREM1-202ENST00000334475 C21orf62-AS1Q17RA5 79 aa6.29□□□□□ -1.4
TREM1-202ENST00000334475 OCIAD2Q56VL3 154 aa6.29□□□□□ -1.4
TREM1-202ENST00000334475 LITAFQ99732 161 aa6.29□□□□□ -1.4
TREM1-202ENST00000334475 LOC100131303A0A0U1RQF7 123 aa6.28□□□□□ -1.4
TREM1-202ENST00000334475 TEX48A0A1B0GUV7 120 aa6.28□□□□□ -1.4
TREM1-202ENST00000334475 SMIM1B2RUZ4 78 aa6.28□□□□□ -1.4
TREM1-202ENST00000334475 PRB2P02812 416 aaPredicted RBP6.28□□□□□ -1.4
TREM1-202ENST00000334475 MUSTN1Q8IVN3 82 aa6.28□□□□□ -1.4
TREM1-202ENST00000334475 ATP6V0E2Q8NHE4 81 aa6.28□□□□□ -1.4
TREM1-202ENST00000334475 CBY1Q9Y3M2 126 aa6.28□□□□□ -1.4
TREM1-202ENST00000334475 SACSQ9NZJ4 4579 aa6.28□□□□□ -1.4
TREM1-202ENST00000334475 KRTAP9-6A0A140TA67 174 aa6.27□□□□□ -1.41
TREM1-202ENST00000334475 A0A1B0GUV1 79 aa6.27□□□□□ -1.41
TREM1-202ENST00000334475 F5H768 121 aa6.27□□□□□ -1.41
TREM1-202ENST00000334475 PAX4O43316 350 aa6.27□□□□□ -1.41
TREM1-202ENST00000334475 DEFB130BP0DP73 79 aa6.27□□□□□ -1.41
TREM1-202ENST00000334475 DEFB130AP0DP74 79 aa6.27□□□□□ -1.41
TREM1-202ENST00000334475 COX6A2Q02221 97 aa6.27□□□□□ -1.41
TREM1-202ENST00000334475 FAM222AQ5U5X8 452 aa6.27□□□□□ -1.41
TREM1-202ENST00000334475 SFTA2Q6UW10 78 aa6.27□□□□□ -1.41
TREM1-202ENST00000334475 CHCHD5Q9BSY4 110 aa6.27□□□□□ -1.41
TREM1-202ENST00000334475 EPPK1P58107 5090 aaKnown RBP6.27□□□□□ -1.41
TREM1-202ENST00000334475 TRAV26-1A0A087WT03 109 aa6.26□□□□□ -1.41
TREM1-202ENST00000334475 TRAV13-1A0A0B4J241 112 aa6.26□□□□□ -1.41
TREM1-202ENST00000334475 IGHV3-33P01772 117 aa6.26□□□□□ -1.41
TREM1-202ENST00000334475 GYPEP15421 78 aa6.26□□□□□ -1.41
TREM1-202ENST00000334475 GAGE6Q13070 117 aa6.26□□□□□ -1.41
TREM1-202ENST00000334475 LINC01561Q8N1V8 128 aa6.26□□□□□ -1.41
TREM1-202ENST00000334475 ERG28Q9UKR5 140 aa6.26□□□□□ -1.41
TREM1-202ENST00000334475 RYR2Q92736 4967 aa6.25□□□□□ -1.41
TREM1-202ENST00000334475 IGHV4-28A0A0C4DH34 117 aa6.25□□□□□ -1.41
TREM1-202ENST00000334475 A8MZ25 164 aa6.25□□□□□ -1.41
TREM1-202ENST00000334475 ATP5G1P05496 136 aa6.25□□□□□ -1.41
TREM1-202ENST00000334475 DAD1P61803 113 aa6.25□□□□□ -1.41
TREM1-202ENST00000334475 RBX1P62877 108 aa6.25□□□□□ -1.41
TREM1-202ENST00000334475 DEFB135Q30KP9 77 aa6.25□□□□□ -1.41
TREM1-202ENST00000334475 SH2D6Q7Z4S9 175 aa6.25□□□□□ -1.41
TREM1-202ENST00000334475 Q9H8V8 135 aa6.25□□□□□ -1.41
TREM1-202ENST00000334475 COL7A1Q02388 2944 aa6.25□□□□□ -1.41
TREM1-202ENST00000334475 LOC107984156A0A0G2JMH3 177 aa6.24□□□□□ -1.41
TREM1-202ENST00000334475 TRBV30A0A0K0K1B3 111 aa6.24□□□□□ -1.41
TREM1-202ENST00000334475 H3BMG7 143 aa6.24□□□□□ -1.41
TREM1-202ENST00000334475 J3QR89 54 aa6.24□□□□□ -1.41
TREM1-202ENST00000334475 SPART-AS1P0CW21 52 aa6.24□□□□□ -1.41
TREM1-202ENST00000334475 ARL17AQ8IVW1 177 aa6.24□□□□□ -1.41
TREM1-202ENST00000334475 Q8NAQ8 132 aa6.24□□□□□ -1.41
TREM1-202ENST00000334475 ZNF625Q96I27 306 aaPredicted RBP6.24□□□□□ -1.41
TREM1-202ENST00000334475 PRO0461Q9UI25 63 aa6.24□□□□□ -1.41
TREM1-202ENST00000334475 A0A087WZ39 114 aa6.23□□□□□ -1.41
TREM1-202ENST00000334475 G3V4G9 280 aa6.23□□□□□ -1.41
TREM1-202ENST00000334475 M0QXV9 152 aa6.23□□□□□ -1.41
TREM1-202ENST00000334475 PRSS2P07478 247 aa6.23□□□□□ -1.41
TREM1-202ENST00000334475 IGHV4-30-4P0DP06 118 aa6.23□□□□□ -1.41
TREM1-202ENST00000334475 ADAMTSL4-AS1Q5T5F5 129 aa6.23□□□□□ -1.41
TREM1-202ENST00000334475 COX7B2Q8TF08 81 aa6.23□□□□□ -1.41
TREM1-202ENST00000334475 KRTAP4-12Q9BQ66 201 aa6.23□□□□□ -1.41
TREM1-202ENST00000334475 BIRC6Q9NR09 4857 aa6.23□□□□□ -1.41
TREM1-202ENST00000334475 IGLV4-60A0A075B6I1 120 aa6.22□□□□□ -1.41
TREM1-202ENST00000334475 IGHV3OR16-9A0A0B4J2B5 98 aa6.22□□□□□ -1.41
TREM1-202ENST00000334475 SCGB1C2P0DMR2 95 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms