RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 SMIM1B2RUZ4 78 aa10.34□□□□□ -0.75
TPM3-205ENST00000328159 RBX1P62877 108 aa10.34□□□□□ -0.75
TPM3-205ENST00000328159 IGHV3-30P01768 117 aa10.33□□□□□ -0.76
TPM3-205ENST00000328159 IGHV3-30-5P0DP03 117 aa10.33□□□□□ -0.76
TPM3-205ENST00000328159 SH2D6Q7Z4S9 175 aa10.33□□□□□ -0.76
TPM3-205ENST00000328159 A0A1B0GWB2 263 aa10.32□□□□□ -0.76
TPM3-205ENST00000328159 TMEM238C9JI98 176 aa10.32□□□□□ -0.76
TPM3-205ENST00000328159 H3BUT2 72 aa10.32□□□□□ -0.76
TPM3-205ENST00000328159 TMEM238LA0A1B0GVL6 79 aa10.31□□□□□ -0.76
TPM3-205ENST00000328159 A6NJY4 79 aa10.31□□□□□ -0.76
TPM3-205ENST00000328159 PRB2P02812 416 aaPredicted RBP10.31□□□□□ -0.76
TPM3-205ENST00000328159 NAA38Q9BRA0 125 aaKnown RBP10.31□□□□□ -0.76
TPM3-205ENST00000328159 NDUFA1O15239 70 aa10.31□□□□□ -0.76
TPM3-205ENST00000328159 UBE2V1Q13404 147 aa10.31□□□□□ -0.76
TPM3-205ENST00000328159 LINC00959A0A1B0GUT2 108 aa10.3□□□□□ -0.76
TPM3-205ENST00000328159 LITAFQ99732 161 aa10.3□□□□□ -0.76
TPM3-205ENST00000328159 NOTCH1P46531 2555 aa10.3□□□□□ -0.76
TPM3-205ENST00000328159 A0A0J9YWU9 116 aa10.29□□□□□ -0.76
TPM3-205ENST00000328159 K7EIL1 84 aa10.29□□□□□ -0.76
TPM3-205ENST00000328159 LELP1Q5T871 98 aa10.29□□□□□ -0.76
TPM3-205ENST00000328159 Q6ZTC4 211 aa10.29□□□□□ -0.76
TPM3-205ENST00000328159 IGHV3OR16-9A0A0B4J2B5 98 aa10.28□□□□□ -0.76
TPM3-205ENST00000328159 A0A1W2PPM0 123 aa10.28□□□□□ -0.76
TPM3-205ENST00000328159 H3BNG1 76 aa10.28□□□□□ -0.76
TPM3-205ENST00000328159 CCL25O15444 150 aa10.28□□□□□ -0.76
TPM3-205ENST00000328159 SS18Q15532 418 aa10.28□□□□□ -0.76
TPM3-205ENST00000328159 MDFIQ99750 246 aa10.28□□□□□ -0.76
TPM3-205ENST00000328159 ANK2Q01484 3957 aa10.28□□□□□ -0.76
TPM3-205ENST00000328159 IGLL5B9A064 214 aa10.27□□□□□ -0.77
TPM3-205ENST00000328159 TIMM17BO60830 172 aa10.27□□□□□ -0.77
TPM3-205ENST00000328159 MUSTN1Q8IVN3 82 aa10.27□□□□□ -0.77
TPM3-205ENST00000328159 Q9H8V8 135 aa10.27□□□□□ -0.77
TPM3-205ENST00000328159 ADAMTSL4-AS1Q5T5F5 129 aa10.26□□□□□ -0.77
TPM3-205ENST00000328159 KPRPQ5T749 579 aaPredicted RBP10.26□□□□□ -0.77
TPM3-205ENST00000328159 SPATA25Q9BR10 227 aa10.26□□□□□ -0.77
TPM3-205ENST00000328159 SPANXDQ9BXN6 97 aa10.26□□□□□ -0.77
TPM3-205ENST00000328159 SPANXCQ9NY87 97 aa10.26□□□□□ -0.77
TPM3-205ENST00000328159 A0A087WZ39 114 aa10.26□□□□□ -0.77
TPM3-205ENST00000328159 CLPSL2Q6UWE3 100 aa10.26□□□□□ -0.77
TPM3-205ENST00000328159 C11orf45Q8TAV5 145 aa10.26□□□□□ -0.77
TPM3-205ENST00000328159 TENM3Q9P273 2699 aa10.25□□□□□ -0.77
TPM3-205ENST00000328159 APOMO95445 188 aa10.25□□□□□ -0.77
TPM3-205ENST00000328159 FABP2P12104 132 aa10.25□□□□□ -0.77
TPM3-205ENST00000328159 NANOS2P60321 138 aaKnown RBP10.25□□□□□ -0.77
TPM3-205ENST00000328159 RPL24P83731 157 aaKnown RBP10.25□□□□□ -0.77
TPM3-205ENST00000328159 MIAQ16674 131 aa10.25□□□□□ -0.77
TPM3-205ENST00000328159 DEFB121Q5J5C9 76 aa10.25□□□□□ -0.77
TPM3-205ENST00000328159 LYPD5Q6UWN5 251 aa10.25□□□□□ -0.77
TPM3-205ENST00000328159 LINC00269Q8N2A0 174 aa10.25□□□□□ -0.77
TPM3-205ENST00000328159 Q8N3U1 123 aa10.25□□□□□ -0.77
TPM3-205ENST00000328159 COX7B2Q8TF08 81 aa10.25□□□□□ -0.77
TPM3-205ENST00000328159 ZNF625Q96I27 306 aaPredicted RBP10.25□□□□□ -0.77
TPM3-205ENST00000328159 A4D1N5 150 aa10.24□□□□□ -0.77
TPM3-205ENST00000328159 C5orf38Q86SI9 138 aa10.24□□□□□ -0.77
TPM3-205ENST00000328159 TM2D3Q9BRN9 247 aa10.24□□□□□ -0.77
TPM3-205ENST00000328159 GAGE10A6NGK3 116 aa10.24□□□□□ -0.77
TPM3-205ENST00000328159 ANGP03950 147 aaKnown RBP10.24□□□□□ -0.77
TPM3-205ENST00000328159 PRSS2P07478 247 aa10.24□□□□□ -0.77
TPM3-205ENST00000328159 CFC1BP0CG36 223 aa10.24□□□□□ -0.77
TPM3-205ENST00000328159 CFC1P0CG37 223 aa10.24□□□□□ -0.77
TPM3-205ENST00000328159 XCL1P47992 114 aa10.24□□□□□ -0.77
TPM3-205ENST00000328159 K7EP34 96 aa10.23□□□□□ -0.77
TPM3-205ENST00000328159 HERV-K104P63124 156 aa10.23□□□□□ -0.77
TPM3-205ENST00000328159 CIRBPQ14011 172 aaKnown RBP10.23□□□□□ -0.77
TPM3-205ENST00000328159 GTF2H5Q6ZYL4 71 aa10.23□□□□□ -0.77
TPM3-205ENST00000328159 NBEAL1Q6ZS30 2694 aa10.22□□□□□ -0.77
TPM3-205ENST00000328159 DEFB131BA0A096LNP1 70 aa10.22□□□□□ -0.77
TPM3-205ENST00000328159 REG3AQ06141 175 aa10.22□□□□□ -0.77
TPM3-205ENST00000328159 MRAPQ8TCY5 172 aa10.22□□□□□ -0.77
TPM3-205ENST00000328159 PGPEP1Q9NXJ5 209 aa10.22□□□□□ -0.77
TPM3-205ENST00000328159 TOMM7Q9P0U1 55 aa10.22□□□□□ -0.77
TPM3-205ENST00000328159 SPCS1Q9Y6A9 102 aa10.22□□□□□ -0.77
TPM3-205ENST00000328159 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.21□□□□□ -0.78
TPM3-205ENST00000328159 TSPAN13O95857 204 aa10.2□□□□□ -0.78
TPM3-205ENST00000328159 IFITM1P13164 125 aa10.2□□□□□ -0.78
TPM3-205ENST00000328159 MEIG1Q5JSS6 88 aa10.2□□□□□ -0.78
TPM3-205ENST00000328159 LINC01561Q8N1V8 128 aa10.2□□□□□ -0.78
TPM3-205ENST00000328159 CHCHD10Q8WYQ3 142 aaPredicted RBP10.2□□□□□ -0.78
TPM3-205ENST00000328159 PRO1854Q9UHT4 67 aa10.2□□□□□ -0.78
TPM3-205ENST00000328159 MGAM2Q2M2H8 2515 aa10.2□□□□□ -0.78
TPM3-205ENST00000328159 A0A0B4J2C4 111 aa10.19□□□□□ -0.78
TPM3-205ENST00000328159 EIF4EBP3O60516 100 aaPredicted RBP10.19□□□□□ -0.78
TPM3-205ENST00000328159 NPC2P61916 151 aa10.19□□□□□ -0.78
TPM3-205ENST00000328159 CD164L2Q6UWJ8 174 aa10.19□□□□□ -0.78
TPM3-205ENST00000328159 DAND5Q8N907 189 aa10.19□□□□□ -0.78
TPM3-205ENST00000328159 A0A0U1RRA0 63 aa10.18□□□□□ -0.78
TPM3-205ENST00000328159 IGLV10-54A0A075B6I4 117 aa10.17□□□□□ -0.78
TPM3-205ENST00000328159 KLK12Q9UKR0 248 aa10.17□□□□□ -0.78
TPM3-205ENST00000328159 COX7A2LO14548 114 aa10.16□□□□□ -0.78
TPM3-205ENST00000328159 IGHV3-33P01772 117 aa10.16□□□□□ -0.78
TPM3-205ENST00000328159 LINC00308Q8TCZ7 52 aa10.16□□□□□ -0.78
TPM3-205ENST00000328159 PRR34Q9NV39 138 aa10.16□□□□□ -0.78
TPM3-205ENST00000328159 TRAV10A0A0B4J240 114 aa10.16□□□□□ -0.78
TPM3-205ENST00000328159 ESRGQ1W209 222 aa10.16□□□□□ -0.78
TPM3-205ENST00000328159 WFDC10BQ8IUB3 73 aa10.16□□□□□ -0.78
TPM3-205ENST00000328159 C6orf226Q5I0X4 101 aa10.15□□□□□ -0.78
TPM3-205ENST00000328159 SFTA2Q6UW10 78 aa10.15□□□□□ -0.78
TPM3-205ENST00000328159 Q8IZM0 81 aa10.15□□□□□ -0.78
TPM3-205ENST00000328159 COPS9Q8WXC6 57 aa10.15□□□□□ -0.78
TPM3-205ENST00000328159 FOXI1Q12951 378 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms