RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 MAPKAPK5-AS1Q8N8E1 139 aa6.71□□□□□ -1.34
TMEM39A-201ENST00000319172 KIR2DL5BQ8NHK3 375 aa6.71□□□□□ -1.34
TMEM39A-201ENST00000319172 RNF183Q96D59 192 aa6.71□□□□□ -1.34
TMEM39A-201ENST00000319172 TRBV6-8A0A0A6YYG3 113 aa6.7□□□□□ -1.34
TMEM39A-201ENST00000319172 ZNF22P17026 224 aaPredicted RBP6.7□□□□□ -1.34
TMEM39A-201ENST00000319172 TTC32Q5I0X7 151 aa6.7□□□□□ -1.34
TMEM39A-201ENST00000319172 FAM19A4Q96LR4 140 aa6.7□□□□□ -1.34
TMEM39A-201ENST00000319172 MUSTN1Q8IVN3 82 aa6.7□□□□□ -1.34
TMEM39A-201ENST00000319172 LINC00269Q8N2A0 174 aa6.7□□□□□ -1.34
TMEM39A-201ENST00000319172 A8MZ25 164 aa6.7□□□□□ -1.34
TMEM39A-201ENST00000319172 KRTAP1-1Q07627 177 aa6.7□□□□□ -1.34
TMEM39A-201ENST00000319172 TM2D2Q9BX73 214 aa6.7□□□□□ -1.34
TMEM39A-201ENST00000319172 IGHV1-58A0A0C4DH39 117 aa6.69□□□□□ -1.34
TMEM39A-201ENST00000319172 GTSF1LQ9H1H1 148 aa6.69□□□□□ -1.34
TMEM39A-201ENST00000319172 GAGE2BQ13066 116 aa6.69□□□□□ -1.34
TMEM39A-201ENST00000319172 CDK2AP2O75956 126 aa6.69□□□□□ -1.34
TMEM39A-201ENST00000319172 C2orf82Q6UX34 121 aa6.69□□□□□ -1.34
TMEM39A-201ENST00000319172 CRYBG3Q68DQ2 2970 aa6.69□□□□□ -1.34
TMEM39A-201ENST00000319172 A0A1W2PPM0 123 aa6.69□□□□□ -1.34
TMEM39A-201ENST00000319172 C9JAW5 83 aa6.69□□□□□ -1.34
TMEM39A-201ENST00000319172 COX7B2Q8TF08 81 aa6.69□□□□□ -1.34
TMEM39A-201ENST00000319172 ANAPC13Q9BS18 74 aa6.69□□□□□ -1.34
TMEM39A-201ENST00000319172 KIF25-AS1Q9Y6Z4 181 aa6.69□□□□□ -1.34
TMEM39A-201ENST00000319172 BAHCC1Q9P281 2608 aa6.68□□□□□ -1.34
TMEM39A-201ENST00000319172 IGLV2-18A0A075B6J9 118 aa6.68□□□□□ -1.34
TMEM39A-201ENST00000319172 BEAN1Q3B7T3 259 aa6.68□□□□□ -1.34
TMEM39A-201ENST00000319172 C10orf126Q8N4M7 172 aa6.68□□□□□ -1.34
TMEM39A-201ENST00000319172 SMIM20Q8N5G0 67 aa6.68□□□□□ -1.34
TMEM39A-201ENST00000319172 H3BMG7 143 aa6.68□□□□□ -1.34
TMEM39A-201ENST00000319172 HIGD1BQ9P298 99 aa6.68□□□□□ -1.34
TMEM39A-201ENST00000319172 IGIPA6NJ69 53 aa6.68□□□□□ -1.34
TMEM39A-201ENST00000319172 KRTAP24-1Q3LI83 254 aa6.68□□□□□ -1.34
TMEM39A-201ENST00000319172 TINCRA0A1B0GVN0 87 aa6.67□□□□□ -1.34
TMEM39A-201ENST00000319172 UBE2D3P61077 147 aa6.67□□□□□ -1.34
TMEM39A-201ENST00000319172 UBE2D2P62837 147 aa6.67□□□□□ -1.34
TMEM39A-201ENST00000319172 SPAG11BQ08648 103 aa6.67□□□□□ -1.34
TMEM39A-201ENST00000319172 PIK3CD-AS1Q5SR53 167 aa6.67□□□□□ -1.34
TMEM39A-201ENST00000319172 UBE2D4Q9Y2X8 147 aa6.67□□□□□ -1.34
TMEM39A-201ENST00000319172 C11orf72Q8NBR9 251 aa6.67□□□□□ -1.34
TMEM39A-201ENST00000319172 Q9UF83 564 aa6.67□□□□□ -1.34
TMEM39A-201ENST00000319172 J3KT08 172 aa6.66□□□□□ -1.34
TMEM39A-201ENST00000319172 NOTCH1P46531 2555 aa6.66□□□□□ -1.34
TMEM39A-201ENST00000319172 IGKV2-24A0A0C4DH68 120 aa6.66□□□□□ -1.34
TMEM39A-201ENST00000319172 TAX1BP3O14907 124 aa6.66□□□□□ -1.34
TMEM39A-201ENST00000319172 LINC00315P59091 139 aa6.66□□□□□ -1.34
TMEM39A-201ENST00000319172 HRNRQ86YZ3 2850 aaPredicted RBP6.66□□□□□ -1.34
TMEM39A-201ENST00000319172 REG3AQ06141 175 aa6.66□□□□□ -1.34
TMEM39A-201ENST00000319172 ETDBQ3ZM63 59 aa6.66□□□□□ -1.34
TMEM39A-201ENST00000319172 PYGO1Q9Y3Y4 419 aa6.66□□□□□ -1.34
TMEM39A-201ENST00000319172 CR1P17927 2039 aa6.66□□□□□ -1.34
TMEM39A-201ENST00000319172 CFC1BP0CG36 223 aa6.66□□□□□ -1.34
TMEM39A-201ENST00000319172 CFC1P0CG37 223 aa6.66□□□□□ -1.34
TMEM39A-201ENST00000319172 TMEM223A0PJW6 202 aa6.65□□□□□ -1.34
TMEM39A-201ENST00000319172 NDUFA1O15239 70 aa6.65□□□□□ -1.34
TMEM39A-201ENST00000319172 NFE4Q86UQ8 179 aa6.65□□□□□ -1.34
TMEM39A-201ENST00000319172 K7EP34 96 aa6.65□□□□□ -1.34
TMEM39A-201ENST00000319172 LINC00694P0DN24 101 aa6.65□□□□□ -1.34
TMEM39A-201ENST00000319172 HIGD2BQ4VC39 106 aa6.65□□□□□ -1.34
TMEM39A-201ENST00000319172 SS18L2Q9UHA2 77 aa6.65□□□□□ -1.34
TMEM39A-201ENST00000319172 CSDC2Q9Y534 153 aaKnown RBP6.65□□□□□ -1.34
TMEM39A-201ENST00000319172 A0A0J9YWU9 116 aa6.65□□□□□ -1.35
TMEM39A-201ENST00000319172 TIRAPP58753 221 aa6.65□□□□□ -1.35
TMEM39A-201ENST00000319172 NANOS2P60321 138 aaKnown RBP6.65□□□□□ -1.35
TMEM39A-201ENST00000319172 APCP25054 2843 aa6.65□□□□□ -1.35
TMEM39A-201ENST00000319172 A0A0J9YXY3 114 aa6.64□□□□□ -1.35
TMEM39A-201ENST00000319172 GAGE12HA6NDE8 117 aa6.64□□□□□ -1.35
TMEM39A-201ENST00000319172 M0QXV9 152 aa6.64□□□□□ -1.35
TMEM39A-201ENST00000319172 KPRPQ5T749 579 aaPredicted RBP6.64□□□□□ -1.35
TMEM39A-201ENST00000319172 FHL2Q14192 279 aa6.64□□□□□ -1.35
TMEM39A-201ENST00000319172 MIR7-3HGQ8N6C7 128 aa6.64□□□□□ -1.35
TMEM39A-201ENST00000319172 DEFB105AQ8NG35 78 aa6.64□□□□□ -1.35
TMEM39A-201ENST00000319172 SND1-IT1Q9HBX3 110 aa6.64□□□□□ -1.35
TMEM39A-201ENST00000319172 ETDCA0A1B0GVM5 59 aa6.64□□□□□ -1.35
TMEM39A-201ENST00000319172 M0R2N4 97 aa6.64□□□□□ -1.35
TMEM39A-201ENST00000319172 C2orf91Q6ZV80 131 aa6.64□□□□□ -1.35
TMEM39A-201ENST00000319172 POM121L12Q8N7R1 296 aa6.64□□□□□ -1.35
TMEM39A-201ENST00000319172 CHCHD10Q8WYQ3 142 aaPredicted RBP6.64□□□□□ -1.35
TMEM39A-201ENST00000319172 CHCHD7Q9BUK0 85 aa6.63□□□□□ -1.35
TMEM39A-201ENST00000319172 OVOL2Q9BRP0 275 aa6.63□□□□□ -1.35
TMEM39A-201ENST00000319172 TRAV13-2A0A0B4J235 113 aa6.63□□□□□ -1.35
TMEM39A-201ENST00000319172 TRAV10A0A0B4J240 114 aa6.63□□□□□ -1.35
TMEM39A-201ENST00000319172 ZFHX4Q86UP3 3567 aa6.63□□□□□ -1.35
TMEM39A-201ENST00000319172 DCHS2Q6V1P9 2916 aa6.62□□□□□ -1.35
TMEM39A-201ENST00000319172 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.62□□□□□ -1.35
TMEM39A-201ENST00000319172 IFITM1P13164 125 aa6.62□□□□□ -1.35
TMEM39A-201ENST00000319172 KRTAP10-3P60369 221 aa6.62□□□□□ -1.35
TMEM39A-201ENST00000319172 HIST1H4AP62805 103 aaKnown RBP6.62□□□□□ -1.35
TMEM39A-201ENST00000319172 LINC00526Q96FQ7 95 aa6.62□□□□□ -1.35
TMEM39A-201ENST00000319172 TRBV20-1A0A075B6N2 111 aa6.62□□□□□ -1.35
TMEM39A-201ENST00000319172 LY6G6CO95867 125 aa6.62□□□□□ -1.35
TMEM39A-201ENST00000319172 Q6ZTC4 211 aa6.62□□□□□ -1.35
TMEM39A-201ENST00000319172 CDC42SE2Q9NRR3 84 aa6.62□□□□□ -1.35
TMEM39A-201ENST00000319172 TRAV8-4A0A0B4J246 113 aa6.61□□□□□ -1.35
TMEM39A-201ENST00000319172 GAGE2AQ6NT46 116 aa6.61□□□□□ -1.35
TMEM39A-201ENST00000319172 C15orf53Q8NAA6 179 aa6.61□□□□□ -1.35
TMEM39A-201ENST00000319172 CELSR2Q9HCU4 2923 aa6.61□□□□□ -1.35
TMEM39A-201ENST00000319172 IGLV4-60A0A075B6I1 120 aa6.61□□□□□ -1.35
TMEM39A-201ENST00000319172 IGLV4-69A0A075B6H9 119 aa6.61□□□□□ -1.35
TMEM39A-201ENST00000319172 H7C423 109 aa6.61□□□□□ -1.35
TMEM39A-201ENST00000319172 LECT2O14960 151 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms