RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 PPP1R17O96001 155 aa5.44□□□□□ -1.54
TRIM55-202ENST00000315962 DEFB135Q30KP9 77 aa5.44□□□□□ -1.54
TRIM55-202ENST00000315962 BEAN1Q3B7T3 259 aa5.44□□□□□ -1.54
TRIM55-202ENST00000315962 PAPPA-AS1Q5QFB9 102 aa5.44□□□□□ -1.54
TRIM55-202ENST00000315962 A0A096LPF7 62 aa5.43□□□□□ -1.54
TRIM55-202ENST00000315962 NHLRC4P0CG21 123 aaPredicted RBP5.43□□□□□ -1.54
TRIM55-202ENST00000315962 NDUFA12Q9UI09 145 aa5.43□□□□□ -1.54
TRIM55-202ENST00000315962 TENM3Q9P273 2699 aa5.43□□□□□ -1.54
TRIM55-202ENST00000315962 GAGE12JA6NER3 117 aa5.43□□□□□ -1.54
TRIM55-202ENST00000315962 GAGE4Q13068 117 aa5.43□□□□□ -1.54
TRIM55-202ENST00000315962 C2orf82Q6UX34 121 aa5.43□□□□□ -1.54
TRIM55-202ENST00000315962 C15orf53Q8NAA6 179 aa5.43□□□□□ -1.54
TRIM55-202ENST00000315962 FAM104AQ969W3 186 aa5.43□□□□□ -1.54
TRIM55-202ENST00000315962 A8MTW9 85 aa5.42□□□□□ -1.54
TRIM55-202ENST00000315962 I3L3M4 83 aa5.42□□□□□ -1.54
TRIM55-202ENST00000315962 GAGE2BQ13066 116 aa5.42□□□□□ -1.54
TRIM55-202ENST00000315962 GAGE2EQ4V326 116 aa5.42□□□□□ -1.54
TRIM55-202ENST00000315962 GAGE2DQ9UEU5 116 aa5.42□□□□□ -1.54
TRIM55-202ENST00000315962 PRB2P02812 416 aaPredicted RBP5.42□□□□□ -1.54
TRIM55-202ENST00000315962 TRAV8-4A0A0B4J246 113 aa5.41□□□□□ -1.54
TRIM55-202ENST00000315962 RPL13AP40429 203 aaKnown RBP5.41□□□□□ -1.54
TRIM55-202ENST00000315962 ATXN8Q156A1 80 aa5.41□□□□□ -1.54
TRIM55-202ENST00000315962 KRTAP24-1Q3LI83 254 aa5.41□□□□□ -1.54
TRIM55-202ENST00000315962 SBSPONQ8IVN8 264 aa5.41□□□□□ -1.54
TRIM55-202ENST00000315962 CSNK1G2-AS1Q8NCQ2 148 aa5.41□□□□□ -1.54
TRIM55-202ENST00000315962 LITAFQ99732 161 aa5.41□□□□□ -1.54
TRIM55-202ENST00000315962 LINC00467Q9BRT7 94 aa5.41□□□□□ -1.54
TRIM55-202ENST00000315962 CSDC2Q9Y534 153 aaKnown RBP5.41□□□□□ -1.54
TRIM55-202ENST00000315962 ICOSQ9Y6W8 199 aa5.41□□□□□ -1.54
TRIM55-202ENST00000315962 IGKV3OR2-268A0A0C4DH90 116 aa5.41□□□□□ -1.54
TRIM55-202ENST00000315962 PLAC8L1A1L4L8 177 aa5.41□□□□□ -1.54
TRIM55-202ENST00000315962 RS1O15537 224 aa5.41□□□□□ -1.54
TRIM55-202ENST00000315962 UBE2WQ96B02 151 aa5.41□□□□□ -1.54
TRIM55-202ENST00000315962 CDKN2A-AS1Q9UH64 79 aa5.41□□□□□ -1.54
TRIM55-202ENST00000315962 H7C423 109 aa5.41□□□□□ -1.54
TRIM55-202ENST00000315962 LINC00694P0DN24 101 aa5.4□□□□□ -1.54
TRIM55-202ENST00000315962 NDUFV3P56181 108 aaKnown RBP5.4□□□□□ -1.54
TRIM55-202ENST00000315962 PPDPFQ9H3Y8 114 aa5.4□□□□□ -1.54
TRIM55-202ENST00000315962 TRBV6-5A0A0K0K1A5 114 aa5.4□□□□□ -1.55
TRIM55-202ENST00000315962 COX6A2Q02221 97 aa5.4□□□□□ -1.55
TRIM55-202ENST00000315962 CHCHD5Q9BSY4 110 aa5.4□□□□□ -1.55
TRIM55-202ENST00000315962 TRAV13-1A0A0B4J241 112 aa5.39□□□□□ -1.55
TRIM55-202ENST00000315962 A0A0B4J2C4 111 aa5.39□□□□□ -1.55
TRIM55-202ENST00000315962 TRGV4A0A0C4DH28 118 aa5.39□□□□□ -1.55
TRIM55-202ENST00000315962 HTN3P15516 51 aa5.39□□□□□ -1.55
TRIM55-202ENST00000315962 RHOHQ15669 191 aa5.39□□□□□ -1.55
TRIM55-202ENST00000315962 TRBV10-2A0A0K0K1G8 114 aa5.38□□□□□ -1.55
TRIM55-202ENST00000315962 PRIMA1Q86XR5 153 aa5.38□□□□□ -1.55
TRIM55-202ENST00000315962 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.38□□□□□ -1.55
TRIM55-202ENST00000315962 IGHV1-58A0A0C4DH39 117 aa5.38□□□□□ -1.55
TRIM55-202ENST00000315962 TMEM262E9PQX1 116 aa5.38□□□□□ -1.55
TRIM55-202ENST00000315962 C9orf66Q5T8R8 295 aa5.38□□□□□ -1.55
TRIM55-202ENST00000315962 DGAT2L7PQ6IED9 249 aa5.37□□□□□ -1.55
TRIM55-202ENST00000315962 NTM-AS1Q6ZSK4 140 aa5.37□□□□□ -1.55
TRIM55-202ENST00000315962 VSIG2Q96IQ7 327 aa5.37□□□□□ -1.55
TRIM55-202ENST00000315962 CHCHD7Q9BUK0 85 aa5.37□□□□□ -1.55
TRIM55-202ENST00000315962 Q9H8V8 135 aa5.37□□□□□ -1.55
TRIM55-202ENST00000315962 IFITM1P13164 125 aa5.37□□□□□ -1.55
TRIM55-202ENST00000315962 PIK3CD-AS1Q5SR53 167 aa5.37□□□□□ -1.55
TRIM55-202ENST00000315962 RETNQ9HD89 108 aa5.37□□□□□ -1.55
TRIM55-202ENST00000315962 UBE2D4Q9Y2X8 147 aa5.37□□□□□ -1.55
TRIM55-202ENST00000315962 IGHV4-30-4P0DP06 118 aa5.37□□□□□ -1.55
TRIM55-202ENST00000315962 MRPS36P82909 103 aaKnown RBP5.37□□□□□ -1.55
TRIM55-202ENST00000315962 MIAQ16674 131 aa5.37□□□□□ -1.55
TRIM55-202ENST00000315962 FAM222AQ5U5X8 452 aa5.37□□□□□ -1.55
TRIM55-202ENST00000315962 C16orf74Q96GX8 76 aa5.37□□□□□ -1.55
TRIM55-202ENST00000315962 K7EQD1 137 aa5.36□□□□□ -1.55
TRIM55-202ENST00000315962 TMEM101Q96IK0 257 aa5.36□□□□□ -1.55
TRIM55-202ENST00000315962 Q9HAA7 133 aa5.36□□□□□ -1.55
TRIM55-202ENST00000315962 TRBV30A0A0K0K1B3 111 aa5.36□□□□□ -1.55
TRIM55-202ENST00000315962 F8WDY8 70 aa5.36□□□□□ -1.55
TRIM55-202ENST00000315962 RPL36AP83881 106 aaKnown RBP5.36□□□□□ -1.55
TRIM55-202ENST00000315962 MEIG1Q5JSS6 88 aa5.36□□□□□ -1.55
TRIM55-202ENST00000315962 SOSTDC1Q6X4U4 206 aa5.36□□□□□ -1.55
TRIM55-202ENST00000315962 RPL36ALQ969Q0 106 aaKnown RBP5.36□□□□□ -1.55
TRIM55-202ENST00000315962 X6R8D5 127 aa5.36□□□□□ -1.55
TRIM55-202ENST00000315962 COX6CP09669 75 aa5.35□□□□□ -1.55
TRIM55-202ENST00000315962 KRTAP10-11P60412 298 aa5.35□□□□□ -1.55
TRIM55-202ENST00000315962 IL17DQ8TAD2 202 aa5.35□□□□□ -1.55
TRIM55-202ENST00000315962 DAZ2Q13117 558 aaKnown RBP5.35□□□□□ -1.55
TRIM55-202ENST00000315962 CLPSL2Q6UWE3 100 aa5.35□□□□□ -1.55
TRIM55-202ENST00000315962 C11orf68Q9H3H3 251 aaKnown RBP5.35□□□□□ -1.55
TRIM55-202ENST00000315962 TOMM7Q9P0U1 55 aa5.35□□□□□ -1.55
TRIM55-202ENST00000315962 CELA1Q9UNI1 258 aa5.35□□□□□ -1.55
TRIM55-202ENST00000315962 SMIM9A6NGZ8 99 aa5.34□□□□□ -1.55
TRIM55-202ENST00000315962 CMC4P56277 68 aaPredicted RBP5.34□□□□□ -1.55
TRIM55-202ENST00000315962 FHL2Q14192 279 aa5.34□□□□□ -1.55
TRIM55-202ENST00000315962 Q8N3U1 123 aa5.34□□□□□ -1.55
TRIM55-202ENST00000315962 SMCR5Q8TEV8 140 aa5.34□□□□□ -1.55
TRIM55-202ENST00000315962 SPANXA1Q9NS26 97 aa5.34□□□□□ -1.55
TRIM55-202ENST00000315962 IGHV4-28A0A0C4DH34 117 aa5.34□□□□□ -1.56
TRIM55-202ENST00000315962 FAM236AA0A1B0GUQ0 79 aa5.34□□□□□ -1.56
TRIM55-202ENST00000315962 FAM236BA0A1B0GV22 79 aa5.34□□□□□ -1.56
TRIM55-202ENST00000315962 LST1O00453 97 aa5.34□□□□□ -1.56
TRIM55-202ENST00000315962 FAM218AQ96MZ4 157 aa5.34□□□□□ -1.56
TRIM55-202ENST00000315962 GYPEP15421 78 aa5.33□□□□□ -1.56
TRIM55-202ENST00000315962 LINC00308Q8TCZ7 52 aa5.33□□□□□ -1.56
TRIM55-202ENST00000315962 TINCRA0A1B0GVN0 87 aa5.33□□□□□ -1.56
TRIM55-202ENST00000315962 MRAPQ8TCY5 172 aa5.33□□□□□ -1.56
TRIM55-202ENST00000315962 LINC00242Q5T6M2 205 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms