RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 ZNF843Q8N446 348 aa13.31□□□□□ -0.28
CDK5R1-201ENST00000313401 SPATA25Q9BR10 227 aa13.31□□□□□ -0.28
CDK5R1-201ENST00000313401 CHCHD7Q9BUK0 85 aa13.31□□□□□ -0.28
CDK5R1-201ENST00000313401 BBC3Q96PG8 261 aaPredicted RBP13.31□□□□□ -0.28
CDK5R1-201ENST00000313401 TRAV13-2A0A0B4J235 113 aa13.31□□□□□ -0.28
CDK5R1-201ENST00000313401 DEFB135Q30KP9 77 aa13.3□□□□□ -0.28
CDK5R1-201ENST00000313401 TRBV10-1A0A0K0K1A3 114 aa13.29□□□□□ -0.28
CDK5R1-201ENST00000313401 BRI3O95415 125 aa13.29□□□□□ -0.28
CDK5R1-201ENST00000313401 LINC00242Q5T6M2 205 aa13.28□□□□□ -0.28
CDK5R1-201ENST00000313401 HERV-K104P63124 156 aa13.28□□□□□ -0.28
CDK5R1-201ENST00000313401 C1orf158Q8N1D5 194 aa13.28□□□□□ -0.28
CDK5R1-201ENST00000313401 TRAV25A0A0B4J276 109 aa13.27□□□□□ -0.28
CDK5R1-201ENST00000313401 USP24Q9UPU5 2620 aa13.27□□□□□ -0.28
CDK5R1-201ENST00000313401 TRBV30A0A0K0K1B3 111 aa13.27□□□□□ -0.28
CDK5R1-201ENST00000313401 LAMTOR3Q9UHA4 124 aa13.27□□□□□ -0.28
CDK5R1-201ENST00000313401 SVEP1Q4LDE5 3571 aa13.27□□□□□ -0.29
CDK5R1-201ENST00000313401 LECT2O14960 151 aa13.27□□□□□ -0.29
CDK5R1-201ENST00000313401 LINC00482Q8N8I6 264 aa13.27□□□□□ -0.29
CDK5R1-201ENST00000313401 PRO0461Q9UI25 63 aa13.27□□□□□ -0.29
CDK5R1-201ENST00000313401 H3BT86 120 aa13.26□□□□□ -0.29
CDK5R1-201ENST00000313401 LINC01006Q8NI28 216 aa13.26□□□□□ -0.29
CDK5R1-201ENST00000313401 NDUFA1O15239 70 aa13.26□□□□□ -0.29
CDK5R1-201ENST00000313401 NBEAL2Q6ZNJ1 2754 aa13.25□□□□□ -0.29
CDK5R1-201ENST00000313401 ATRQ13535 2644 aa13.25□□□□□ -0.29
CDK5R1-201ENST00000313401 INAFM2P0DMQ5 153 aa13.25□□□□□ -0.29
CDK5R1-201ENST00000313401 AMELXQ99217 191 aa13.25□□□□□ -0.29
CDK5R1-201ENST00000313401 KLK9Q2XQG4 91 aa13.24□□□□□ -0.29
CDK5R1-201ENST00000313401 GCN1Q92616 2671 aaKnown RBP13.24□□□□□ -0.29
CDK5R1-201ENST00000313401 H7C423 109 aa13.24□□□□□ -0.29
CDK5R1-201ENST00000313401 TIRAPP58753 221 aa13.24□□□□□ -0.29
CDK5R1-201ENST00000313401 UTP20O75691 2785 aaKnown RBP13.23□□□□□ -0.29
CDK5R1-201ENST00000313401 IGKV3D-7A0A0C4DH55 119 aa13.23□□□□□ -0.29
CDK5R1-201ENST00000313401 SLPIP03973 132 aa13.23□□□□□ -0.29
CDK5R1-201ENST00000313401 FAM236AA0A1B0GUQ0 79 aa13.22□□□□□ -0.29
CDK5R1-201ENST00000313401 FAM236BA0A1B0GV22 79 aa13.22□□□□□ -0.29
CDK5R1-201ENST00000313401 SMR3AQ99954 134 aa13.22□□□□□ -0.29
CDK5R1-201ENST00000313401 COX7A2LO14548 114 aa13.21□□□□□ -0.29
CDK5R1-201ENST00000313401 J3QKU1 62 aa13.2□□□□□ -0.3
CDK5R1-201ENST00000313401 SPANXDQ9BXN6 97 aa13.2□□□□□ -0.3
CDK5R1-201ENST00000313401 SPANXCQ9NY87 97 aa13.2□□□□□ -0.3
CDK5R1-201ENST00000313401 CDIP1Q9H305 208 aa13.2□□□□□ -0.3
CDK5R1-201ENST00000313401 C14orf132Q9NPU4 83 aa13.2□□□□□ -0.3
CDK5R1-201ENST00000313401 HELZ2Q9BYK8 2649 aaKnown RBP13.2□□□□□ -0.3
CDK5R1-201ENST00000313401 SMIM1B2RUZ4 78 aa13.19□□□□□ -0.3
CDK5R1-201ENST00000313401 LINC00526Q96FQ7 95 aa13.19□□□□□ -0.3
CDK5R1-201ENST00000313401 CDC42SE2Q9NRR3 84 aa13.19□□□□□ -0.3
CDK5R1-201ENST00000313401 LST1O00453 97 aa13.19□□□□□ -0.3
CDK5R1-201ENST00000313401 FAM222AQ5U5X8 452 aa13.18□□□□□ -0.3
CDK5R1-201ENST00000313401 LINC00269Q8N2A0 174 aa13.18□□□□□ -0.3
CDK5R1-201ENST00000313401 CLUHP3Q96NS8 147 aa13.18□□□□□ -0.3
CDK5R1-201ENST00000313401 TRBV6-8A0A0A6YYG3 113 aa13.18□□□□□ -0.3
CDK5R1-201ENST00000313401 CELSR1Q9NYQ6 3014 aa13.18□□□□□ -0.3
CDK5R1-201ENST00000313401 C11orf72Q8NBR9 251 aa13.17□□□□□ -0.3
CDK5R1-201ENST00000313401 NDUFV3P56181 108 aaKnown RBP13.17□□□□□ -0.3
CDK5R1-201ENST00000313401 IGLV4-60A0A075B6I1 120 aa13.17□□□□□ -0.3
CDK5R1-201ENST00000313401 NCR3O14931 201 aa13.16□□□□□ -0.3
CDK5R1-201ENST00000313401 OVOL2Q9BRP0 275 aa13.16□□□□□ -0.3
CDK5R1-201ENST00000313401 KLK12Q9UKR0 248 aa13.15□□□□□ -0.3
CDK5R1-201ENST00000313401 PRO0255Q9UI72 69 aa13.14□□□□□ -0.31
CDK5R1-201ENST00000313401 EIF4EBP3O60516 100 aaPredicted RBP13.14□□□□□ -0.31
CDK5R1-201ENST00000313401 LRRC75A-AS1Q8N1F1 130 aa13.14□□□□□ -0.31
CDK5R1-201ENST00000313401 F8P00451 2351 aa13.13□□□□□ -0.31
CDK5R1-201ENST00000313401 NF1P21359 2839 aa13.13□□□□□ -0.31
CDK5R1-201ENST00000313401 NTM-AS1Q6ZSK4 140 aa13.13□□□□□ -0.31
CDK5R1-201ENST00000313401 TRBV6-4A0A1B0GX49 114 aa13.12□□□□□ -0.31
CDK5R1-201ENST00000313401 HAMPP81172 84 aa13.12□□□□□ -0.31
CDK5R1-201ENST00000313401 ORMDL1Q9P0S3 153 aa13.12□□□□□ -0.31
CDK5R1-201ENST00000313401 MRPL23Q16540 153 aaKnown RBP13.11□□□□□ -0.31
CDK5R1-201ENST00000313401 BEAN1Q3B7T3 259 aa13.11□□□□□ -0.31
CDK5R1-201ENST00000313401 ZNF561-AS1K7EIQ3 104 aa13.11□□□□□ -0.31
CDK5R1-201ENST00000313401 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.11□□□□□ -0.31
CDK5R1-201ENST00000313401 Q8N2B8 174 aa13.11□□□□□ -0.31
CDK5R1-201ENST00000313401 APOC4P55056 127 aa13.1□□□□□ -0.31
CDK5R1-201ENST00000313401 FBN2P35556 2912 aa13.1□□□□□ -0.31
CDK5R1-201ENST00000313401 TIMM17BO60830 172 aa13.1□□□□□ -0.31
CDK5R1-201ENST00000313401 H0YGX0 51 aa13.09□□□□□ -0.31
CDK5R1-201ENST00000313401 PRR3P79522 188 aaKnown RBP13.09□□□□□ -0.31
CDK5R1-201ENST00000313401 TRACP01848 142 aa13.08□□□□□ -0.32
CDK5R1-201ENST00000313401 CCL18P55774 89 aa13.08□□□□□ -0.32
CDK5R1-201ENST00000313401 SPENQ96T58 3664 aaKnown RBP13.08□□□□□ -0.32
CDK5R1-201ENST00000313401 CCDC179H3BU77 68 aa13.08□□□□□ -0.32
CDK5R1-201ENST00000313401 SMIM11BQ8TCY0 68 aa13.08□□□□□ -0.32
CDK5R1-201ENST00000313401 SDIM1Q6ZPB5 146 aa13.07□□□□□ -0.32
CDK5R1-201ENST00000313401 FHL3Q13643 280 aa13.07□□□□□ -0.32
CDK5R1-201ENST00000313401 LINC00959A0A1B0GUT2 108 aa13.06□□□□□ -0.32
CDK5R1-201ENST00000313401 ACYP1P07311 99 aa13.06□□□□□ -0.32
CDK5R1-201ENST00000313401 SPAG11BQ08648 103 aa13.06□□□□□ -0.32
CDK5R1-201ENST00000313401 CHCHD10Q8WYQ3 142 aaPredicted RBP13.06□□□□□ -0.32
CDK5R1-201ENST00000313401 INAFM1C9JVW0 142 aa13.05□□□□□ -0.32
CDK5R1-201ENST00000313401 TMEM126AQ9H061 195 aa13.05□□□□□ -0.32
CDK5R1-201ENST00000313401 REG3AQ06141 175 aa13.05□□□□□ -0.32
CDK5R1-201ENST00000313401 CUBNO60494 3623 aa13.04□□□□□ -0.32
CDK5R1-201ENST00000313401 RPL18AQ02543 176 aaKnown RBP13.04□□□□□ -0.32
CDK5R1-201ENST00000313401 C9orf116Q5BN46 136 aaPredicted RBP13.04□□□□□ -0.32
CDK5R1-201ENST00000313401 C9orf66Q5T8R8 295 aa13.04□□□□□ -0.32
CDK5R1-201ENST00000313401 SOSTDC1Q6X4U4 206 aa13.04□□□□□ -0.32
CDK5R1-201ENST00000313401 C1orf43Q9BWL3 253 aa13.04□□□□□ -0.32
CDK5R1-201ENST00000313401 SPART-AS1P0CW21 52 aa13.03□□□□□ -0.32
CDK5R1-201ENST00000313401 XAGE1AQ9HD64 81 aa13.03□□□□□ -0.32
CDK5R1-201ENST00000313401 UBR5O95071 2799 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms