RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 IGLV1-51P01701 117 aa17.12■□□□□ 0.33
FOXA3-201ENST00000302177 XGP55808 180 aa17.12■□□□□ 0.33
FOXA3-201ENST00000302177 NPC2P61916 151 aa17.12■□□□□ 0.33
FOXA3-201ENST00000302177 HERV-K104P63124 156 aa17.12■□□□□ 0.33
FOXA3-201ENST00000302177 NTN5Q8WTR8 489 aaPredicted RBP17.11■□□□□ 0.33
FOXA3-201ENST00000302177 TMEM243Q9BU79 118 aa17.11■□□□□ 0.33
FOXA3-201ENST00000302177 TRAV13-1A0A0B4J241 112 aa17.1■□□□□ 0.33
FOXA3-201ENST00000302177 F5H768 121 aa17.1■□□□□ 0.33
FOXA3-201ENST00000302177 LST1O00453 97 aa17.1■□□□□ 0.33
FOXA3-201ENST00000302177 MT-ATP8P03928 68 aa17.1■□□□□ 0.33
FOXA3-201ENST00000302177 ZNF625Q96I27 306 aaPredicted RBP17.1■□□□□ 0.33
FOXA3-201ENST00000302177 C19orf73Q9NVV2 129 aa17.1■□□□□ 0.33
FOXA3-201ENST00000302177 UBE2L6O14933 153 aa17.09■□□□□ 0.33
FOXA3-201ENST00000302177 CSNK1G2-AS1Q8NCQ2 148 aa17.08■□□□□ 0.33
FOXA3-201ENST00000302177 NDUFA7O95182 113 aa17.08■□□□□ 0.32
FOXA3-201ENST00000302177 C2orf82Q6UX34 121 aa17.08■□□□□ 0.32
FOXA3-201ENST00000302177 DAND5Q8N907 189 aa17.08■□□□□ 0.32
FOXA3-201ENST00000302177 TRGV2A0A075B6R0 118 aa17.07■□□□□ 0.32
FOXA3-201ENST00000302177 KRTAP1-1Q07627 177 aa17.07■□□□□ 0.32
FOXA3-201ENST00000302177 LY6G6DO95868 133 aa17.06■□□□□ 0.32
FOXA3-201ENST00000302177 GAGE7O76087 117 aa17.05■□□□□ 0.32
FOXA3-201ENST00000302177 GAGE12FP0CL80 117 aa17.05■□□□□ 0.32
FOXA3-201ENST00000302177 GAGE12GP0CL81 117 aa17.05■□□□□ 0.32
FOXA3-201ENST00000302177 GAGE12IP0CL82 117 aa17.05■□□□□ 0.32
FOXA3-201ENST00000302177 PRIMA1Q86XR5 153 aa17.05■□□□□ 0.32
FOXA3-201ENST00000302177 UBE2WQ96B02 151 aa17.05■□□□□ 0.32
FOXA3-201ENST00000302177 CKS1BP61024 79 aa17.04■□□□□ 0.32
FOXA3-201ENST00000302177 CLEC2BQ92478 149 aa17.02■□□□□ 0.32
FOXA3-201ENST00000302177 SONP18583 2426 aaKnown RBP17.02■□□□□ 0.31
FOXA3-201ENST00000302177 TEX49A0A1B0GTD5 131 aa17.02■□□□□ 0.31
FOXA3-201ENST00000302177 RPL35AP18077 110 aaKnown RBP17.02■□□□□ 0.31
FOXA3-201ENST00000302177 MEIG1Q5JSS6 88 aa17.02■□□□□ 0.31
FOXA3-201ENST00000302177 SHISA2Q6UWI4 295 aa17.01■□□□□ 0.31
FOXA3-201ENST00000302177 TRGV4A0A0C4DH28 118 aa17■□□□□ 0.31
FOXA3-201ENST00000302177 DEFB121Q5J5C9 76 aa17■□□□□ 0.31
FOXA3-201ENST00000302177 SOSTDC1Q6X4U4 206 aa17■□□□□ 0.31
FOXA3-201ENST00000302177 SETD2Q9BYW2 2564 aaPredicted RBP16.99■□□□□ 0.31
FOXA3-201ENST00000302177 WFDC10AQ9H1F0 79 aa16.99■□□□□ 0.31
FOXA3-201ENST00000302177 TRAV8-4A0A0B4J246 113 aa16.98■□□□□ 0.31
FOXA3-201ENST00000302177 COX7A2LO14548 114 aa16.98■□□□□ 0.31
FOXA3-201ENST00000302177 NIPBLQ6KC79 2804 aaeCLIP16.98■□□□□ 0.31
FOXA3-201ENST00000302177 FHL2Q14192 279 aa16.98■□□□□ 0.31
FOXA3-201ENST00000302177 HIVEP2P31629 2446 aa16.97■□□□□ 0.31
FOXA3-201ENST00000302177 TRBV6-8A0A0A6YYG3 113 aa16.97■□□□□ 0.31
FOXA3-201ENST00000302177 LOC100131303A0A0U1RQF7 123 aa16.97■□□□□ 0.31
FOXA3-201ENST00000302177 CITED1Q99966 193 aa16.97■□□□□ 0.31
FOXA3-201ENST00000302177 PF4P02776 101 aa16.96■□□□□ 0.31
FOXA3-201ENST00000302177 HILS1P60008 231 aa16.96■□□□□ 0.31
FOXA3-201ENST00000302177 NSD1Q96L73 2696 aaPredicted RBP16.95■□□□□ 0.3
FOXA3-201ENST00000302177 A0A0U1RRA0 63 aa16.95■□□□□ 0.3
FOXA3-201ENST00000302177 COX7B2Q8TF08 81 aa16.95■□□□□ 0.3
FOXA3-201ENST00000302177 FN1P02751 2386 aaKnown RBP16.94■□□□□ 0.3
FOXA3-201ENST00000302177 FAM240AA0A1B0GVK7 77 aa16.93■□□□□ 0.3
FOXA3-201ENST00000302177 MRPL23Q16540 153 aaKnown RBP16.93■□□□□ 0.3
FOXA3-201ENST00000302177 KIR2DL5BQ8NHK3 375 aa16.93■□□□□ 0.3
FOXA3-201ENST00000302177 INAFM1C9JVW0 142 aa16.92■□□□□ 0.3
FOXA3-201ENST00000302177 GAGE6Q13070 117 aa16.92■□□□□ 0.3
FOXA3-201ENST00000302177 FAM222AQ5U5X8 452 aa16.92■□□□□ 0.3
FOXA3-201ENST00000302177 SNCGO76070 127 aa16.91■□□□□ 0.3
FOXA3-201ENST00000302177 TRACP01848 142 aa16.91■□□□□ 0.3
FOXA3-201ENST00000302177 NF1P21359 2839 aa16.9■□□□□ 0.3
FOXA3-201ENST00000302177 TRAV13-2A0A0B4J235 113 aa16.9■□□□□ 0.3
FOXA3-201ENST00000302177 IGHV3OR16-9A0A0B4J2B5 98 aa16.9■□□□□ 0.3
FOXA3-201ENST00000302177 Q6Q795 121 aa16.9■□□□□ 0.3
FOXA3-201ENST00000302177 LINC00612Q8N6U2 182 aa16.9■□□□□ 0.3
FOXA3-201ENST00000302177 ANK3Q12955 4377 aaKnown RBP16.89■□□□□ 0.29
FOXA3-201ENST00000302177 IGLV4-60A0A075B6I1 120 aa16.88■□□□□ 0.29
FOXA3-201ENST00000302177 CHCHD5Q9BSY4 110 aa16.88■□□□□ 0.29
FOXA3-201ENST00000302177 WNK1Q9H4A3 2382 aa16.87■□□□□ 0.29
FOXA3-201ENST00000302177 CUBNO60494 3623 aa16.87■□□□□ 0.29
FOXA3-201ENST00000302177 A0A087WZ39 114 aa16.87■□□□□ 0.29
FOXA3-201ENST00000302177 GAGE2BQ13066 116 aa16.87■□□□□ 0.29
FOXA3-201ENST00000302177 GAGE2EQ4V326 116 aa16.87■□□□□ 0.29
FOXA3-201ENST00000302177 GAGE2DQ9UEU5 116 aa16.87■□□□□ 0.29
FOXA3-201ENST00000302177 RPL28P46779 137 aaKnown RBP16.86■□□□□ 0.29
FOXA3-201ENST00000302177 IBA57-AS1B1ANH7 110 aa16.84■□□□□ 0.29
FOXA3-201ENST00000302177 MIR7-3HGQ8N6C7 128 aa16.84■□□□□ 0.29
FOXA3-201ENST00000302177 SMIM9A6NGZ8 99 aa16.83■□□□□ 0.28
FOXA3-201ENST00000302177 ACYP1P07311 99 aa16.83■□□□□ 0.28
FOXA3-201ENST00000302177 C15orf53Q8NAA6 179 aa16.82■□□□□ 0.28
FOXA3-201ENST00000302177 JMJD1CQ15652 2540 aa16.82■□□□□ 0.28
FOXA3-201ENST00000302177 TOMM7Q9P0U1 55 aa16.82■□□□□ 0.28
FOXA3-201ENST00000302177 A0A1B0GUV1 79 aa16.81■□□□□ 0.28
FOXA3-201ENST00000302177 CRLF1O75462 422 aa16.81■□□□□ 0.28
FOXA3-201ENST00000302177 CRPP02741 224 aa16.81■□□□□ 0.28
FOXA3-201ENST00000302177 SND1-IT1Q9HBX3 110 aa16.81■□□□□ 0.28
FOXA3-201ENST00000302177 LINC00959A0A1B0GUT2 108 aa16.8■□□□□ 0.28
FOXA3-201ENST00000302177 LINC00482Q8N8I6 264 aa16.8■□□□□ 0.28
FOXA3-201ENST00000302177 IGKV3OR2-268A0A0C4DH90 116 aa16.79■□□□□ 0.28
FOXA3-201ENST00000302177 DEFB130BP0DP73 79 aa16.79■□□□□ 0.28
FOXA3-201ENST00000302177 DEFB130AP0DP74 79 aa16.79■□□□□ 0.28
FOXA3-201ENST00000302177 LINC00158P58513 81 aa16.78■□□□□ 0.28
FOXA3-201ENST00000302177 ANAPC13Q9BS18 74 aa16.78■□□□□ 0.28
FOXA3-201ENST00000302177 LINC01561Q8N1V8 128 aa16.78■□□□□ 0.28
FOXA3-201ENST00000302177 C2CD3Q4AC94 2353 aa16.78■□□□□ 0.28
FOXA3-201ENST00000302177 IGKV2-28A0A075B6P5 120 aa16.77■□□□□ 0.28
FOXA3-201ENST00000302177 IGKV2D-28P01615 120 aa16.77■□□□□ 0.28
FOXA3-201ENST00000302177 BAALC-AS2P0C853 105 aa16.77■□□□□ 0.27
FOXA3-201ENST00000302177 LINC00337Q8N6G1 96 aa16.77■□□□□ 0.27
FOXA3-201ENST00000302177 TRAV26-1A0A087WT03 109 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms