RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 TRAV13-1A0A0B4J241 112 aa13.62□□□□□ -0.23
TRA2A-201ENST00000297071 H0YGX0 51 aa13.62□□□□□ -0.23
TRA2A-201ENST00000297071 UQCRQO14949 82 aa13.62□□□□□ -0.23
TRA2A-201ENST00000297071 CRPP02741 224 aa13.62□□□□□ -0.23
TRA2A-201ENST00000297071 MALP21145 153 aa13.62□□□□□ -0.23
TRA2A-201ENST00000297071 C2CD3Q4AC94 2353 aa13.62□□□□□ -0.23
TRA2A-201ENST00000297071 CREBBPQ92793 2442 aa13.62□□□□□ -0.23
TRA2A-201ENST00000297071 TRGV1A0A0A0MS02 117 aa13.62□□□□□ -0.23
TRA2A-201ENST00000297071 C3orf22Q8N5N4 141 aa13.62□□□□□ -0.23
TRA2A-201ENST00000297071 ODF3L2Q3SX64 289 aa13.61□□□□□ -0.23
TRA2A-201ENST00000297071 STHQ8IWL8 128 aa13.61□□□□□ -0.23
TRA2A-201ENST00000297071 FAM218AQ96MZ4 157 aa13.61□□□□□ -0.23
TRA2A-201ENST00000297071 CMC4P56277 68 aaPredicted RBP13.6□□□□□ -0.23
TRA2A-201ENST00000297071 COX7B2Q8TF08 81 aa13.6□□□□□ -0.23
TRA2A-201ENST00000297071 SVEP1Q4LDE5 3571 aa13.6□□□□□ -0.23
TRA2A-201ENST00000297071 CSPG4Q6UVK1 2322 aa13.6□□□□□ -0.23
TRA2A-201ENST00000297071 Q96MF0 132 aa13.6□□□□□ -0.23
TRA2A-201ENST00000297071 OBSCN-AS1Q96MR7 158 aa13.6□□□□□ -0.23
TRA2A-201ENST00000297071 UBE2L6O14933 153 aa13.59□□□□□ -0.23
TRA2A-201ENST00000297071 HIST1H4AP62805 103 aaKnown RBP13.59□□□□□ -0.23
TRA2A-201ENST00000297071 LINC00526Q96FQ7 95 aa13.59□□□□□ -0.23
TRA2A-201ENST00000297071 XCL2Q9UBD3 114 aa13.59□□□□□ -0.23
TRA2A-201ENST00000297071 FBN2P35556 2912 aa13.59□□□□□ -0.23
TRA2A-201ENST00000297071 CR1P17927 2039 aa13.59□□□□□ -0.23
TRA2A-201ENST00000297071 A0A0U1RRA0 63 aa13.58□□□□□ -0.24
TRA2A-201ENST00000297071 NDUFA7O95182 113 aa13.57□□□□□ -0.24
TRA2A-201ENST00000297071 IGHV4-31P0DP07 118 aa13.57□□□□□ -0.24
TRA2A-201ENST00000297071 SMIM20Q8N5G0 67 aa13.57□□□□□ -0.24
TRA2A-201ENST00000297071 TRBV6-4A0A1B0GX49 114 aa13.57□□□□□ -0.24
TRA2A-201ENST00000297071 TMEM86BQ8N661 226 aa13.57□□□□□ -0.24
TRA2A-201ENST00000297071 NOTCH2Q04721 2471 aa13.56□□□□□ -0.24
TRA2A-201ENST00000297071 IBA57-AS1B1ANH7 110 aa13.56□□□□□ -0.24
TRA2A-201ENST00000297071 SND1-IT1Q9HBX3 110 aa13.56□□□□□ -0.24
TRA2A-201ENST00000297071 CELSR1Q9NYQ6 3014 aa13.55□□□□□ -0.24
TRA2A-201ENST00000297071 IGKV2-28A0A075B6P5 120 aa13.55□□□□□ -0.24
TRA2A-201ENST00000297071 IGKV2D-28P01615 120 aa13.55□□□□□ -0.24
TRA2A-201ENST00000297071 Q6ZTI0 123 aa13.55□□□□□ -0.24
TRA2A-201ENST00000297071 LINC00337Q8N6G1 96 aa13.55□□□□□ -0.24
TRA2A-201ENST00000297071 MIR7-3HGQ8N6C7 128 aa13.55□□□□□ -0.24
TRA2A-201ENST00000297071 ATOX1O00244 68 aa13.53□□□□□ -0.24
TRA2A-201ENST00000297071 DNAL4O96015 105 aa13.53□□□□□ -0.24
TRA2A-201ENST00000297071 C16orf74Q96GX8 76 aa13.53□□□□□ -0.24
TRA2A-201ENST00000297071 COX7CP15954 63 aa13.53□□□□□ -0.24
TRA2A-201ENST00000297071 C9orf153Q5TBE3 101 aa13.53□□□□□ -0.24
TRA2A-201ENST00000297071 Q6JHZ5 121 aa13.52□□□□□ -0.25
TRA2A-201ENST00000297071 SMIM11BQ8TCY0 68 aa13.52□□□□□ -0.25
TRA2A-201ENST00000297071 GAGE2AQ6NT46 116 aa13.51□□□□□ -0.25
TRA2A-201ENST00000297071 A0A087WZ39 114 aa13.5□□□□□ -0.25
TRA2A-201ENST00000297071 IGHV3OR16-9A0A0B4J2B5 98 aa13.5□□□□□ -0.25
TRA2A-201ENST00000297071 KLK5Q9Y337 293 aaPredicted RBP13.5□□□□□ -0.25
TRA2A-201ENST00000297071 ITPR3Q14573 2671 aa13.5□□□□□ -0.25
TRA2A-201ENST00000297071 LY6G6DO95868 133 aa13.5□□□□□ -0.25
TRA2A-201ENST00000297071 A0A1B0GX51 115 aa13.49□□□□□ -0.25
TRA2A-201ENST00000297071 CRYGAP11844 174 aa13.49□□□□□ -0.25
TRA2A-201ENST00000297071 CCL18P55774 89 aa13.49□□□□□ -0.25
TRA2A-201ENST00000297071 COL12A1Q99715 3063 aa13.48□□□□□ -0.25
TRA2A-201ENST00000297071 PLAC8L1A1L4L8 177 aa13.48□□□□□ -0.25
TRA2A-201ENST00000297071 LINC01561Q8N1V8 128 aa13.48□□□□□ -0.25
TRA2A-201ENST00000297071 C2orf48Q96LS8 159 aa13.48□□□□□ -0.25
TRA2A-201ENST00000297071 LRRC75A-AS1Q8N1F1 130 aa13.48□□□□□ -0.25
TRA2A-201ENST00000297071 Q9HAA7 133 aa13.48□□□□□ -0.25
TRA2A-201ENST00000297071 LINC00158P58513 81 aa13.47□□□□□ -0.25
TRA2A-201ENST00000297071 KHDC1LQ5JSQ8 128 aa13.47□□□□□ -0.25
TRA2A-201ENST00000297071 NRGNQ92686 78 aa13.47□□□□□ -0.25
TRA2A-201ENST00000297071 NOP10Q9NPE3 64 aaKnown RBP13.46□□□□□ -0.25
TRA2A-201ENST00000297071 A0A087WYN8 130 aa13.46□□□□□ -0.26
TRA2A-201ENST00000297071 C11orf44Q8N8P7 122 aa13.46□□□□□ -0.26
TRA2A-201ENST00000297071 LINC00167Q96N53 147 aa13.46□□□□□ -0.26
TRA2A-201ENST00000297071 TRBV6-8A0A0A6YYG3 113 aa13.45□□□□□ -0.26
TRA2A-201ENST00000297071 GIG44P09565 113 aaPredicted RBP13.44□□□□□ -0.26
TRA2A-201ENST00000297071 FBN3Q75N90 2809 aa13.44□□□□□ -0.26
TRA2A-201ENST00000297071 RPL18AQ02543 176 aaKnown RBP13.43□□□□□ -0.26
TRA2A-201ENST00000297071 A0A1W2PRX2 142 aa13.43□□□□□ -0.26
TRA2A-201ENST00000297071 MAPK1IP1LQ8NDC0 245 aa13.43□□□□□ -0.26
TRA2A-201ENST00000297071 TRGV2A0A075B6R0 118 aa13.41□□□□□ -0.26
TRA2A-201ENST00000297071 CCL24O00175 119 aa13.41□□□□□ -0.26
TRA2A-201ENST00000297071 TOMM7Q9P0U1 55 aa13.41□□□□□ -0.26
TRA2A-201ENST00000297071 RPS28P62857 69 aaKnown RBP13.41□□□□□ -0.26
TRA2A-201ENST00000297071 IGLV4-60A0A075B6I1 120 aa13.4□□□□□ -0.26
TRA2A-201ENST00000297071 TRGV4A0A0C4DH28 118 aa13.4□□□□□ -0.26
TRA2A-201ENST00000297071 FHL2Q14192 279 aa13.4□□□□□ -0.26
TRA2A-201ENST00000297071 S100A7L2Q5SY68 101 aa13.4□□□□□ -0.26
TRA2A-201ENST00000297071 ORMDL1Q9P0S3 153 aa13.4□□□□□ -0.26
TRA2A-201ENST00000297071 USP9YO00507 2555 aaPredicted RBP13.4□□□□□ -0.26
TRA2A-201ENST00000297071 FLNCQ14315 2725 aa13.4□□□□□ -0.27
TRA2A-201ENST00000297071 LRRK2Q5S007 2527 aa13.39□□□□□ -0.27
TRA2A-201ENST00000297071 VPS13CQ709C8 3753 aa13.39□□□□□ -0.27
TRA2A-201ENST00000297071 LECT2O14960 151 aa13.39□□□□□ -0.27
TRA2A-201ENST00000297071 Q8IZM0 81 aa13.39□□□□□ -0.27
TRA2A-201ENST00000297071 CSNK1G2-AS1Q8NCQ2 148 aa13.39□□□□□ -0.27
TRA2A-201ENST00000297071 C14orf132Q9NPU4 83 aa13.39□□□□□ -0.27
TRA2A-201ENST00000297071 LOC100131303A0A0U1RQF7 123 aa13.38□□□□□ -0.27
TRA2A-201ENST00000297071 LINC00959A0A1B0GUT2 108 aa13.38□□□□□ -0.27
TRA2A-201ENST00000297071 JMJD7-PLA2G4BH0Y9G9 81 aa13.38□□□□□ -0.27
TRA2A-201ENST00000297071 A0A1B0GUV1 79 aa13.37□□□□□ -0.27
TRA2A-201ENST00000297071 NDUFC2O95298 119 aa13.37□□□□□ -0.27
TRA2A-201ENST00000297071 ATP5EP2Q5VTU8 51 aa13.37□□□□□ -0.27
TRA2A-201ENST00000297071 LINC00846Q9NV44 126 aa13.37□□□□□ -0.27
TRA2A-201ENST00000297071 SPG11Q96JI7 2443 aa13.37□□□□□ -0.27
TRA2A-201ENST00000297071 PAX4O43316 350 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms