RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ACYP1P07311 99 aa9.92□□□□□ -0.82
HPS3-201ENST00000296051 M0R2N4 97 aa9.92□□□□□ -0.82
HPS3-201ENST00000296051 SDIM1Q6ZPB5 146 aa9.92□□□□□ -0.82
HPS3-201ENST00000296051 UBE2D1P51668 147 aa9.91□□□□□ -0.82
HPS3-201ENST00000296051 TRBV27A0A0K0K1C4 114 aa9.91□□□□□ -0.82
HPS3-201ENST00000296051 LY6G6CO95867 125 aa9.91□□□□□ -0.82
HPS3-201ENST00000296051 ETDCA0A1B0GVM5 59 aa9.9□□□□□ -0.82
HPS3-201ENST00000296051 PSMB8P28062 276 aa9.9□□□□□ -0.82
HPS3-201ENST00000296051 BOD1L1Q8NFC6 3051 aa9.9□□□□□ -0.82
HPS3-201ENST00000296051 SLPIP03973 132 aa9.9□□□□□ -0.82
HPS3-201ENST00000296051 Q8N6K4 173 aa9.9□□□□□ -0.83
HPS3-201ENST00000296051 ORMDL1Q9P0S3 153 aa9.9□□□□□ -0.83
HPS3-201ENST00000296051 IGIPA6NJ69 53 aa9.89□□□□□ -0.83
HPS3-201ENST00000296051 hADV29S1A0JD25 119 aa9.89□□□□□ -0.83
HPS3-201ENST00000296051 RAI1Q7Z5J4 1906 aaPredicted RBP9.89□□□□□ -0.83
HPS3-201ENST00000296051 COX7B2Q8TF08 81 aa9.89□□□□□ -0.83
HPS3-201ENST00000296051 TSHBP01222 138 aa9.88□□□□□ -0.83
HPS3-201ENST00000296051 DSCR8Q96T75 97 aa9.88□□□□□ -0.83
HPS3-201ENST00000296051 SPAG11BQ08648 103 aa9.88□□□□□ -0.83
HPS3-201ENST00000296051 LINC00643Q86TS7 51 aa9.88□□□□□ -0.83
HPS3-201ENST00000296051 CRYGDP07320 174 aa9.88□□□□□ -0.83
HPS3-201ENST00000296051 TRBV30A0A0K0K1B3 111 aa9.88□□□□□ -0.83
HPS3-201ENST00000296051 RBMY1FQ15415 496 aaKnown RBP9.88□□□□□ -0.83
HPS3-201ENST00000296051 POM121L12Q8N7R1 296 aa9.88□□□□□ -0.83
HPS3-201ENST00000296051 LINC00308Q8TCZ7 52 aa9.88□□□□□ -0.83
HPS3-201ENST00000296051 LRCOL1A6NCL2 159 aa9.87□□□□□ -0.83
HPS3-201ENST00000296051 NDUFA1O15239 70 aa9.87□□□□□ -0.83
HPS3-201ENST00000296051 IGLV4-69A0A075B6H9 119 aa9.87□□□□□ -0.83
HPS3-201ENST00000296051 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.87□□□□□ -0.83
HPS3-201ENST00000296051 HIGD2BQ4VC39 106 aa9.87□□□□□ -0.83
HPS3-201ENST00000296051 MUC4Q99102 2169 aa9.87□□□□□ -0.83
HPS3-201ENST00000296051 SMIM9A6NGZ8 99 aa9.87□□□□□ -0.83
HPS3-201ENST00000296051 TEP1Q99973 2627 aaKnown RBP9.87□□□□□ -0.83
HPS3-201ENST00000296051 PKIGQ9Y2B9 76 aa9.86□□□□□ -0.83
HPS3-201ENST00000296051 ATOX1O00244 68 aa9.86□□□□□ -0.83
HPS3-201ENST00000296051 H7C423 109 aa9.86□□□□□ -0.83
HPS3-201ENST00000296051 MIFP14174 115 aa9.86□□□□□ -0.83
HPS3-201ENST00000296051 CDIP1Q9H305 208 aa9.86□□□□□ -0.83
HPS3-201ENST00000296051 TRAV23DV6A0A075B6W5 121 aa9.86□□□□□ -0.83
HPS3-201ENST00000296051 UBE2D3P61077 147 aa9.86□□□□□ -0.83
HPS3-201ENST00000296051 UBE2D2P62837 147 aa9.86□□□□□ -0.83
HPS3-201ENST00000296051 LYRM9A8MSI8 78 aa9.85□□□□□ -0.83
HPS3-201ENST00000296051 CFAP46Q8IYW2 2715 aa9.85□□□□□ -0.83
HPS3-201ENST00000296051 IGHV4-28A0A0C4DH34 117 aa9.85□□□□□ -0.83
HPS3-201ENST00000296051 UBE2AP49459 152 aa9.85□□□□□ -0.83
HPS3-201ENST00000296051 RBM3P98179 157 aaKnown RBP9.85□□□□□ -0.83
HPS3-201ENST00000296051 NDUFA7O95182 113 aa9.85□□□□□ -0.83
HPS3-201ENST00000296051 SMCPP49901 116 aaPredicted RBP9.84□□□□□ -0.83
HPS3-201ENST00000296051 H0YGX0 51 aa9.84□□□□□ -0.83
HPS3-201ENST00000296051 LINC00269Q8N2A0 174 aa9.84□□□□□ -0.83
HPS3-201ENST00000296051 IGHV4-30-4P0DP06 118 aa9.84□□□□□ -0.83
HPS3-201ENST00000296051 TRBV10-1A0A0K0K1A3 114 aa9.83□□□□□ -0.84
HPS3-201ENST00000296051 TRAV10A0A0B4J240 114 aa9.83□□□□□ -0.84
HPS3-201ENST00000296051 KLLNB2CW77 178 aa9.83□□□□□ -0.84
HPS3-201ENST00000296051 J3KT08 172 aa9.83□□□□□ -0.84
HPS3-201ENST00000296051 NCR3O14931 201 aa9.83□□□□□ -0.84
HPS3-201ENST00000296051 C4orf48Q5BLP8 95 aa9.83□□□□□ -0.84
HPS3-201ENST00000296051 ADAMTSL4-AS1Q5T5F5 129 aa9.83□□□□□ -0.84
HPS3-201ENST00000296051 TRBV6-5A0A0K0K1A5 114 aa9.82□□□□□ -0.84
HPS3-201ENST00000296051 LST1O00453 97 aa9.82□□□□□ -0.84
HPS3-201ENST00000296051 DCHS1Q96JQ0 3298 aa9.82□□□□□ -0.84
HPS3-201ENST00000296051 COX8CQ7Z4L0 72 aa9.8□□□□□ -0.84
HPS3-201ENST00000296051 C20orf197Q8N268 126 aa9.8□□□□□ -0.84
HPS3-201ENST00000296051 ATMQ13315 3056 aa9.8□□□□□ -0.84
HPS3-201ENST00000296051 DCANP1Q8TF63 244 aa9.79□□□□□ -0.84
HPS3-201ENST00000296051 UQCRQO14949 82 aa9.79□□□□□ -0.84
HPS3-201ENST00000296051 NANOS2P60321 138 aaKnown RBP9.79□□□□□ -0.84
HPS3-201ENST00000296051 REG3AQ06141 175 aa9.79□□□□□ -0.84
HPS3-201ENST00000296051 NDUFS5O43920 106 aa9.79□□□□□ -0.84
HPS3-201ENST00000296051 KPRPQ5T749 579 aaPredicted RBP9.79□□□□□ -0.84
HPS3-201ENST00000296051 CFAP47Q6ZTR5 3102 aa9.78□□□□□ -0.84
HPS3-201ENST00000296051 PRO0461Q9UI25 63 aa9.78□□□□□ -0.84
HPS3-201ENST00000296051 A0A0J9YWU9 116 aa9.78□□□□□ -0.84
HPS3-201ENST00000296051 IGLV1-40P01703 118 aa9.78□□□□□ -0.84
HPS3-201ENST00000296051 RETNQ9HD89 108 aa9.78□□□□□ -0.84
HPS3-201ENST00000296051 SPANXCQ9NY87 97 aa9.78□□□□□ -0.84
HPS3-201ENST00000296051 C14orf177Q52M58 125 aa9.77□□□□□ -0.84
HPS3-201ENST00000296051 SPANXDQ9BXN6 97 aa9.77□□□□□ -0.85
HPS3-201ENST00000296051 BRI3O95415 125 aa9.77□□□□□ -0.85
HPS3-201ENST00000296051 C9orf85Q96MD7 179 aa9.77□□□□□ -0.85
HPS3-201ENST00000296051 C3orf22Q8N5N4 141 aa9.77□□□□□ -0.85
HPS3-201ENST00000296051 UBE2D4Q9Y2X8 147 aa9.76□□□□□ -0.85
HPS3-201ENST00000296051 HIGD2AQ9BW72 106 aa9.76□□□□□ -0.85
HPS3-201ENST00000296051 PYGO1Q9Y3Y4 419 aa9.75□□□□□ -0.85
HPS3-201ENST00000296051 A0A087WZ39 114 aa9.75□□□□□ -0.85
HPS3-201ENST00000296051 A0A096LNI7 61 aa9.75□□□□□ -0.85
HPS3-201ENST00000296051 LOC100131303A0A0U1RQF7 123 aa9.75□□□□□ -0.85
HPS3-201ENST00000296051 MRPS36P82909 103 aaKnown RBP9.75□□□□□ -0.85
HPS3-201ENST00000296051 SCXQ7RTU7 201 aa9.75□□□□□ -0.85
HPS3-201ENST00000296051 WFDC9Q8NEX5 89 aa9.75□□□□□ -0.85
HPS3-201ENST00000296051 ZFHX4Q86UP3 3567 aa9.74□□□□□ -0.85
HPS3-201ENST00000296051 KIR2DL5BQ8NHK3 375 aa9.74□□□□□ -0.85
HPS3-201ENST00000296051 A0A087WVE0 104 aa9.74□□□□□ -0.85
HPS3-201ENST00000296051 LINC00694P0DN24 101 aa9.74□□□□□ -0.85
HPS3-201ENST00000296051 ODF3Q96PU9 254 aa9.74□□□□□ -0.85
HPS3-201ENST00000296051 ENHOQ6UWT2 76 aa9.73□□□□□ -0.85
HPS3-201ENST00000296051 CHCHD10Q8WYQ3 142 aaPredicted RBP9.73□□□□□ -0.85
HPS3-201ENST00000296051 ZNF292O60281 2723 aa9.73□□□□□ -0.85
HPS3-201ENST00000296051 PCSK5Q92824 1860 aa9.72□□□□□ -0.85
HPS3-201ENST00000296051 LINC00526Q96FQ7 95 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms