RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 BVES-AS1Q5T3Y7 98 aa15.64■□□□□ 0.09
PTX3-201ENST00000295927 HSD52Q0P140 79 aa15.64■□□□□ 0.09
PTX3-201ENST00000295927 CLPSL2Q6UWE3 100 aa15.64■□□□□ 0.09
PTX3-201ENST00000295927 COL7A1Q02388 2944 aa15.64■□□□□ 0.09
PTX3-201ENST00000295927 LINC00269Q8N2A0 174 aa15.63■□□□□ 0.09
PTX3-201ENST00000295927 ANGP03950 147 aaKnown RBP15.62■□□□□ 0.09
PTX3-201ENST00000295927 ESRGQ1W209 222 aa15.62■□□□□ 0.09
PTX3-201ENST00000295927 SCGB1D4Q6XE38 83 aa15.62■□□□□ 0.09
PTX3-201ENST00000295927 SMIM1B2RUZ4 78 aa15.61■□□□□ 0.09
PTX3-201ENST00000295927 IGLV5-39A0A0G2JS06 123 aa15.6■□□□□ 0.09
PTX3-201ENST00000295927 SS18Q15532 418 aa15.6■□□□□ 0.09
PTX3-201ENST00000295927 IGHV3OR16-9A0A0B4J2B5 98 aa15.59■□□□□ 0.09
PTX3-201ENST00000295927 REG3AQ06141 175 aa15.58■□□□□ 0.09
PTX3-201ENST00000295927 WFDC10BQ8IUB3 73 aa15.58■□□□□ 0.09
PTX3-201ENST00000295927 C15orf53Q8NAA6 179 aa15.58■□□□□ 0.09
PTX3-201ENST00000295927 CCL25O15444 150 aa15.58■□□□□ 0.08
PTX3-201ENST00000295927 COL5A1-AS1Q5SY13 56 aa15.57■□□□□ 0.08
PTX3-201ENST00000295927 XCL1P47992 114 aa15.56■□□□□ 0.08
PTX3-201ENST00000295927 ZFAND6Q6FIF0 208 aa15.56■□□□□ 0.08
PTX3-201ENST00000295927 NDUFA12Q9UI09 145 aa15.56■□□□□ 0.08
PTX3-201ENST00000295927 IGHV3-30P01768 117 aa15.56■□□□□ 0.08
PTX3-201ENST00000295927 IGHV3-33P01772 117 aa15.56■□□□□ 0.08
PTX3-201ENST00000295927 NHLRC4P0CG21 123 aaPredicted RBP15.56■□□□□ 0.08
PTX3-201ENST00000295927 IGHV3-30-5P0DP03 117 aa15.56■□□□□ 0.08
PTX3-201ENST00000295927 C10orf126Q8N4M7 172 aa15.56■□□□□ 0.08
PTX3-201ENST00000295927 TAL2Q16559 108 aa15.55■□□□□ 0.08
PTX3-201ENST00000295927 ORAOV1Q8WV07 137 aa15.55■□□□□ 0.08
PTX3-201ENST00000295927 HIST1H4GQ99525 98 aa15.55■□□□□ 0.08
PTX3-201ENST00000295927 KLK12Q9UKR0 248 aa15.55■□□□□ 0.08
PTX3-201ENST00000295927 C5orf38Q86SI9 138 aa15.55■□□□□ 0.08
PTX3-201ENST00000295927 A0A087WZ39 114 aa15.54■□□□□ 0.08
PTX3-201ENST00000295927 GCSHP23434 173 aa15.54■□□□□ 0.08
PTX3-201ENST00000295927 STAB2Q8WWQ8 2551 aa15.54■□□□□ 0.08
PTX3-201ENST00000295927 IGLL5B9A064 214 aa15.53■□□□□ 0.08
PTX3-201ENST00000295927 CEND1Q8N111 149 aa15.53■□□□□ 0.08
PTX3-201ENST00000295927 A0A0J9YXY3 114 aa15.53■□□□□ 0.08
PTX3-201ENST00000295927 PRR34Q9NV39 138 aa15.53■□□□□ 0.08
PTX3-201ENST00000295927 IGLV10-54A0A075B6I4 117 aa15.52■□□□□ 0.07
PTX3-201ENST00000295927 CHCHD10Q8WYQ3 142 aaPredicted RBP15.52■□□□□ 0.07
PTX3-201ENST00000295927 TM2D2Q9BX73 214 aa15.51■□□□□ 0.07
PTX3-201ENST00000295927 NDUFA1O15239 70 aa15.51■□□□□ 0.07
PTX3-201ENST00000295927 FXYD2P54710 66 aa15.51■□□□□ 0.07
PTX3-201ENST00000295927 SRSF9Q13242 221 aaKnown RBP eCLIP15.5■□□□□ 0.07
PTX3-201ENST00000295927 CD164L2Q6UWJ8 174 aa15.5■□□□□ 0.07
PTX3-201ENST00000295927 ENHOQ6UWT2 76 aa15.5■□□□□ 0.07
PTX3-201ENST00000295927 SPANXB1Q9NS25 103 aaPredicted RBP15.5■□□□□ 0.07
PTX3-201ENST00000295927 K7EP13 123 aa15.49■□□□□ 0.07
PTX3-201ENST00000295927 A0A1B0GV90 55 aa15.48■□□□□ 0.07
PTX3-201ENST00000295927 COX7B2Q8TF08 81 aa15.48■□□□□ 0.07
PTX3-201ENST00000295927 Q9H8V8 135 aa15.48■□□□□ 0.07
PTX3-201ENST00000295927 MEGF8Q7Z7M0 2845 aa15.47■□□□□ 0.07
PTX3-201ENST00000295927 PTTG1IPP53801 180 aa15.47■□□□□ 0.07
PTX3-201ENST00000295927 TOMM7Q9P0U1 55 aa15.47■□□□□ 0.07
PTX3-201ENST00000295927 LINC00588Q9Y4M8 146 aa15.47■□□□□ 0.07
PTX3-201ENST00000295927 A6NDN8 102 aa15.46■□□□□ 0.07
PTX3-201ENST00000295927 LINC01556Q5JQF7 62 aa15.46■□□□□ 0.07
PTX3-201ENST00000295927 LINC01561Q8N1V8 128 aa15.46■□□□□ 0.07
PTX3-201ENST00000295927 UBE2WQ96B02 151 aa15.46■□□□□ 0.07
PTX3-201ENST00000295927 PRKDCP78527 4128 aaKnown RBP15.46■□□□□ 0.07
PTX3-201ENST00000295927 CRPP02741 224 aa15.45■□□□□ 0.06
PTX3-201ENST00000295927 ZNF625Q96I27 306 aaPredicted RBP15.45■□□□□ 0.06
PTX3-201ENST00000295927 TMEM238C9JI98 176 aa15.45■□□□□ 0.06
PTX3-201ENST00000295927 COX7A2LO14548 114 aa15.45■□□□□ 0.06
PTX3-201ENST00000295927 FOXI1Q12951 378 aa15.45■□□□□ 0.06
PTX3-201ENST00000295927 LITAFQ99732 161 aa15.45■□□□□ 0.06
PTX3-201ENST00000295927 CCL18P55774 89 aa15.43■□□□□ 0.06
PTX3-201ENST00000295927 GAGE12HA6NDE8 117 aa15.43■□□□□ 0.06
PTX3-201ENST00000295927 TRAV8-4A0A0B4J246 113 aa15.41■□□□□ 0.06
PTX3-201ENST00000295927 TAX1BP3O14907 124 aa15.41■□□□□ 0.06
PTX3-201ENST00000295927 DNAH10OSP0CZ25 163 aa15.41■□□□□ 0.06
PTX3-201ENST00000295927 ADAMTSL4-AS1Q5T5F5 129 aa15.41■□□□□ 0.06
PTX3-201ENST00000295927 Q6ZVH6 145 aa15.41■□□□□ 0.06
PTX3-201ENST00000295927 TIMM17BO60830 172 aa15.4■□□□□ 0.06
PTX3-201ENST00000295927 HERV-K104P63124 156 aa15.4■□□□□ 0.06
PTX3-201ENST00000295927 MIAQ16674 131 aa15.4■□□□□ 0.06
PTX3-201ENST00000295927 NHP2Q9NX24 153 aaKnown RBP15.4■□□□□ 0.06
PTX3-201ENST00000295927 MALP21145 153 aa15.39■□□□□ 0.05
PTX3-201ENST00000295927 SPANXDQ9BXN6 97 aa15.38■□□□□ 0.05
PTX3-201ENST00000295927 SPANXCQ9NY87 97 aa15.38■□□□□ 0.05
PTX3-201ENST00000295927 SMIM13P0DJ93 91 aa15.37■□□□□ 0.05
PTX3-201ENST00000295927 C6orf226Q5I0X4 101 aa15.37■□□□□ 0.05
PTX3-201ENST00000295927 Q8IZM0 81 aa15.37■□□□□ 0.05
PTX3-201ENST00000295927 K7ERJ3 54 aa15.37■□□□□ 0.05
PTX3-201ENST00000295927 CIRBPQ14011 172 aaKnown RBP15.37■□□□□ 0.05
PTX3-201ENST00000295927 MUSTN1Q8IVN3 82 aa15.37■□□□□ 0.05
PTX3-201ENST00000295927 APLNQ9ULZ1 77 aa15.37■□□□□ 0.05
PTX3-201ENST00000295927 PRSS2P07478 247 aa15.36■□□□□ 0.05
PTX3-201ENST00000295927 TMEM238LA0A1B0GVL6 79 aa15.35■□□□□ 0.05
PTX3-201ENST00000295927 A6NJY4 79 aa15.35■□□□□ 0.05
PTX3-201ENST00000295927 MEIG1Q5JSS6 88 aa15.35■□□□□ 0.05
PTX3-201ENST00000295927 UPK3BQ9BT76 320 aa15.35■□□□□ 0.05
PTX3-201ENST00000295927 COX11Q9Y6N1 276 aa15.35■□□□□ 0.05
PTX3-201ENST00000295927 DYNC2H1Q8NCM8 4307 aaKnown RBP15.35■□□□□ 0.05
PTX3-201ENST00000295927 RAB37Q96AX2 223 aa15.35■□□□□ 0.05
PTX3-201ENST00000295927 KIAA0087Q14695 138 aa15.34■□□□□ 0.05
PTX3-201ENST00000295927 KRTAP26-1Q6PEX3 210 aa15.34■□□□□ 0.05
PTX3-201ENST00000295927 A0A0U1RRA0 63 aa15.33■□□□□ 0.05
PTX3-201ENST00000295927 A0A1B0GWB2 263 aa15.33■□□□□ 0.05
PTX3-201ENST00000295927 DAND5Q8N907 189 aa15.33■□□□□ 0.05
PTX3-201ENST00000295927 APOMO95445 188 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 1198.9 ms