RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 HERVK_113P63121 156 aa13.93□□□□□ -0.18
NKX6-1-201ENST00000295886 YAE1D1Q9NRH1 226 aa13.93□□□□□ -0.18
NKX6-1-201ENST00000295886 COX6CP09669 75 aa13.92□□□□□ -0.18
NKX6-1-201ENST00000295886 LRRC75A-AS1Q8N1F1 130 aa13.92□□□□□ -0.18
NKX6-1-201ENST00000295886 LINC00308Q8TCZ7 52 aa13.92□□□□□ -0.18
NKX6-1-201ENST00000295886 IGLV5-39A0A0G2JS06 123 aa13.91□□□□□ -0.18
NKX6-1-201ENST00000295886 GIG44P09565 113 aaPredicted RBP13.91□□□□□ -0.18
NKX6-1-201ENST00000295886 SOSTDC1Q6X4U4 206 aa13.91□□□□□ -0.18
NKX6-1-201ENST00000295886 IGKV3OR2-268A0A0C4DH90 116 aa13.9□□□□□ -0.18
NKX6-1-201ENST00000295886 CIRBPQ14011 172 aaKnown RBP13.9□□□□□ -0.18
NKX6-1-201ENST00000295886 TRAV25A0A0B4J276 109 aa13.9□□□□□ -0.18
NKX6-1-201ENST00000295886 TIMM17BO60830 172 aa13.9□□□□□ -0.18
NKX6-1-201ENST00000295886 PRIMA1Q86XR5 153 aa13.9□□□□□ -0.18
NKX6-1-201ENST00000295886 MEIG1Q5JSS6 88 aa13.89□□□□□ -0.19
NKX6-1-201ENST00000295886 CDC42SE2Q9NRR3 84 aa13.89□□□□□ -0.19
NKX6-1-201ENST00000295886 TRGV2A0A075B6R0 118 aa13.89□□□□□ -0.19
NKX6-1-201ENST00000295886 H3BT86 120 aa13.89□□□□□ -0.19
NKX6-1-201ENST00000295886 FN1P02751 2386 aaKnown RBP13.88□□□□□ -0.19
NKX6-1-201ENST00000295886 DAZ2Q13117 558 aaKnown RBP13.88□□□□□ -0.19
NKX6-1-201ENST00000295886 DAZ4Q86SG3 579 aaKnown RBP13.88□□□□□ -0.19
NKX6-1-201ENST00000295886 DAZ3Q9NR90 486 aaKnown RBP13.88□□□□□ -0.19
NKX6-1-201ENST00000295886 LST1O00453 97 aa13.87□□□□□ -0.19
NKX6-1-201ENST00000295886 ITPR2Q14571 2701 aa13.87□□□□□ -0.19
NKX6-1-201ENST00000295886 TRBV10-1A0A0K0K1A3 114 aa13.87□□□□□ -0.19
NKX6-1-201ENST00000295886 NBEAL2Q6ZNJ1 2754 aa13.87□□□□□ -0.19
NKX6-1-201ENST00000295886 TMEM86BQ8N661 226 aa13.86□□□□□ -0.19
NKX6-1-201ENST00000295886 PLAC8L1A1L4L8 177 aa13.86□□□□□ -0.19
NKX6-1-201ENST00000295886 F5H768 121 aa13.86□□□□□ -0.19
NKX6-1-201ENST00000295886 UBE2L6O14933 153 aa13.86□□□□□ -0.19
NKX6-1-201ENST00000295886 SMIM20Q8N5G0 67 aa13.85□□□□□ -0.19
NKX6-1-201ENST00000295886 LINC01006Q8NI28 216 aa13.85□□□□□ -0.19
NKX6-1-201ENST00000295886 TMEM243Q9BU79 118 aa13.84□□□□□ -0.19
NKX6-1-201ENST00000295886 CSDC2Q9Y534 153 aaKnown RBP13.83□□□□□ -0.19
NKX6-1-201ENST00000295886 GCN1Q92616 2671 aaKnown RBP13.83□□□□□ -0.2
NKX6-1-201ENST00000295886 MRPL23Q16540 153 aaKnown RBP13.82□□□□□ -0.2
NKX6-1-201ENST00000295886 TOMM7Q9P0U1 55 aa13.82□□□□□ -0.2
NKX6-1-201ENST00000295886 CHCHD5Q9BSY4 110 aa13.82□□□□□ -0.2
NKX6-1-201ENST00000295886 PDZD2O15018 2839 aa13.82□□□□□ -0.2
NKX6-1-201ENST00000295886 TRGV4A0A0C4DH28 118 aa13.81□□□□□ -0.2
NKX6-1-201ENST00000295886 FAM240AA0A1B0GVK7 77 aa13.81□□□□□ -0.2
NKX6-1-201ENST00000295886 FAM19A3Q7Z5A8 133 aa13.8□□□□□ -0.2
NKX6-1-201ENST00000295886 IGLV4-60A0A075B6I1 120 aa13.79□□□□□ -0.2
NKX6-1-201ENST00000295886 DEFB121Q5J5C9 76 aa13.79□□□□□ -0.2
NKX6-1-201ENST00000295886 C19orf73Q9NVV2 129 aa13.79□□□□□ -0.2
NKX6-1-201ENST00000295886 C16orf74Q96GX8 76 aa13.79□□□□□ -0.2
NKX6-1-201ENST00000295886 HERV-K104P63124 156 aa13.78□□□□□ -0.2
NKX6-1-201ENST00000295886 ANK3Q12955 4377 aaKnown RBP13.77□□□□□ -0.2
NKX6-1-201ENST00000295886 C3orf56Q8N813 242 aa13.77□□□□□ -0.21
NKX6-1-201ENST00000295886 FAM110AQ9BQ89 295 aa13.77□□□□□ -0.21
NKX6-1-201ENST00000295886 CSNK1G2-AS1Q8NCQ2 148 aa13.77□□□□□ -0.21
NKX6-1-201ENST00000295886 COX7A2LO14548 114 aa13.76□□□□□ -0.21
NKX6-1-201ENST00000295886 IGLV1-51P01701 117 aa13.76□□□□□ -0.21
NKX6-1-201ENST00000295886 KRTAP1-1Q07627 177 aa13.76□□□□□ -0.21
NKX6-1-201ENST00000295886 TRBV7-7A0A0K0K1E9 115 aa13.75□□□□□ -0.21
NKX6-1-201ENST00000295886 DEFB130BP0DP73 79 aa13.75□□□□□ -0.21
NKX6-1-201ENST00000295886 DEFB130AP0DP74 79 aa13.75□□□□□ -0.21
NKX6-1-201ENST00000295886 VWFP04275 2813 aa13.75□□□□□ -0.21
NKX6-1-201ENST00000295886 SHISA2Q6UWI4 295 aa13.75□□□□□ -0.21
NKX6-1-201ENST00000295886 MIR7-3HGQ8N6C7 128 aa13.75□□□□□ -0.21
NKX6-1-201ENST00000295886 FAM218AQ96MZ4 157 aa13.75□□□□□ -0.21
NKX6-1-201ENST00000295886 TRBV6-4A0A1B0GX49 114 aa13.74□□□□□ -0.21
NKX6-1-201ENST00000295886 FHL2Q14192 279 aa13.73□□□□□ -0.21
NKX6-1-201ENST00000295886 COX7B2Q8TF08 81 aa13.73□□□□□ -0.21
NKX6-1-201ENST00000295886 C11orf68Q9H3H3 251 aaKnown RBP13.73□□□□□ -0.21
NKX6-1-201ENST00000295886 C5orf38Q86SI9 138 aa13.72□□□□□ -0.21
NKX6-1-201ENST00000295886 FAM236AA0A1B0GUQ0 79 aa13.72□□□□□ -0.21
NKX6-1-201ENST00000295886 FAM236BA0A1B0GV22 79 aa13.72□□□□□ -0.21
NKX6-1-201ENST00000295886 TRBV6-8A0A0A6YYG3 113 aa13.71□□□□□ -0.21
NKX6-1-201ENST00000295886 OVOL2Q9BRP0 275 aa13.7□□□□□ -0.22
NKX6-1-201ENST00000295886 RNASE1P07998 156 aaKnown RBP13.7□□□□□ -0.22
NKX6-1-201ENST00000295886 LINC00158P58513 81 aa13.7□□□□□ -0.22
NKX6-1-201ENST00000295886 LINC00337Q8N6G1 96 aa13.7□□□□□ -0.22
NKX6-1-201ENST00000295886 Q9HAA7 133 aa13.7□□□□□ -0.22
NKX6-1-201ENST00000295886 PFN2P35080 140 aa13.69□□□□□ -0.22
NKX6-1-201ENST00000295886 COPS9Q8WXC6 57 aa13.69□□□□□ -0.22
NKX6-1-201ENST00000295886 A0A096LPF7 62 aa13.68□□□□□ -0.22
NKX6-1-201ENST00000295886 IGKV2-28A0A075B6P5 120 aa13.68□□□□□ -0.22
NKX6-1-201ENST00000295886 IGKV2D-28P01615 120 aa13.68□□□□□ -0.22
NKX6-1-201ENST00000295886 ACYP1P07311 99 aa13.68□□□□□ -0.22
NKX6-1-201ENST00000295886 CLPSL2Q6UWE3 100 aa13.68□□□□□ -0.22
NKX6-1-201ENST00000295886 SND1-IT1Q9HBX3 110 aa13.68□□□□□ -0.22
NKX6-1-201ENST00000295886 IGHV3OR16-9A0A0B4J2B5 98 aa13.67□□□□□ -0.22
NKX6-1-201ENST00000295886 SMCR5Q8TEV8 140 aa13.67□□□□□ -0.22
NKX6-1-201ENST00000295886 CMC4P56277 68 aaPredicted RBP13.67□□□□□ -0.22
NKX6-1-201ENST00000295886 SMR3AQ99954 134 aa13.67□□□□□ -0.22
NKX6-1-201ENST00000295886 BAALC-AS2P0C853 105 aa13.66□□□□□ -0.22
NKX6-1-201ENST00000295886 C16orf95Q9H693 158 aa13.66□□□□□ -0.22
NKX6-1-201ENST00000295886 HELZ2Q9BYK8 2649 aaKnown RBP13.66□□□□□ -0.22
NKX6-1-201ENST00000295886 CRPP02741 224 aa13.66□□□□□ -0.22
NKX6-1-201ENST00000295886 FASNP49327 2511 aaKnown RBP13.66□□□□□ -0.22
NKX6-1-201ENST00000295886 IMUPQ9GZP8 106 aa13.65□□□□□ -0.22
NKX6-1-201ENST00000295886 UNC79Q9P2D8 2635 aa13.65□□□□□ -0.23
NKX6-1-201ENST00000295886 C22orf24Q9Y442 160 aa13.64□□□□□ -0.23
NKX6-1-201ENST00000295886 HIVEP2P31629 2446 aa13.64□□□□□ -0.23
NKX6-1-201ENST00000295886 XCL1P47992 114 aa13.64□□□□□ -0.23
NKX6-1-201ENST00000295886 TMEM126AQ9H061 195 aa13.64□□□□□ -0.23
NKX6-1-201ENST00000295886 CCL18P55774 89 aa13.63□□□□□ -0.23
NKX6-1-201ENST00000295886 GYPEP15421 78 aa13.63□□□□□ -0.23
NKX6-1-201ENST00000295886 KRTAP10-3P60369 221 aa13.62□□□□□ -0.23
NKX6-1-201ENST00000295886 LINC00643Q86TS7 51 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms