RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 GYPEP15421 78 aa11.48□□□□□ -0.57
SMAD6-201ENST00000288840 UBE2D3P61077 147 aa11.48□□□□□ -0.57
SMAD6-201ENST00000288840 UBE2D2P62837 147 aa11.48□□□□□ -0.57
SMAD6-201ENST00000288840 MIR7-3HGQ8N6C7 128 aa11.48□□□□□ -0.57
SMAD6-201ENST00000288840 A0A0B4J2C4 111 aa11.47□□□□□ -0.57
SMAD6-201ENST00000288840 ITPR2Q14571 2701 aa11.47□□□□□ -0.57
SMAD6-201ENST00000288840 LINC01006Q8NI28 216 aa11.47□□□□□ -0.57
SMAD6-201ENST00000288840 PYGO1Q9Y3Y4 419 aa11.47□□□□□ -0.57
SMAD6-201ENST00000288840 PRO0461Q9UI25 63 aa11.46□□□□□ -0.57
SMAD6-201ENST00000288840 LINC00482Q8N8I6 264 aa11.46□□□□□ -0.57
SMAD6-201ENST00000288840 DAZ2Q13117 558 aaKnown RBP11.46□□□□□ -0.58
SMAD6-201ENST00000288840 DAZ4Q86SG3 579 aaKnown RBP11.46□□□□□ -0.58
SMAD6-201ENST00000288840 DAZ3Q9NR90 486 aaKnown RBP11.46□□□□□ -0.58
SMAD6-201ENST00000288840 TRBV10-2A0A0K0K1G8 114 aa11.45□□□□□ -0.58
SMAD6-201ENST00000288840 F5H768 121 aa11.45□□□□□ -0.58
SMAD6-201ENST00000288840 LINC00242Q5T6M2 205 aa11.45□□□□□ -0.58
SMAD6-201ENST00000288840 RNF152Q8N8N0 203 aa11.44□□□□□ -0.58
SMAD6-201ENST00000288840 LINC00308Q8TCZ7 52 aa11.44□□□□□ -0.58
SMAD6-201ENST00000288840 SND1-IT1Q9HBX3 110 aa11.44□□□□□ -0.58
SMAD6-201ENST00000288840 SETXQ7Z333 2677 aaKnown RBP11.44□□□□□ -0.58
SMAD6-201ENST00000288840 ATP5G1P05496 136 aa11.44□□□□□ -0.58
SMAD6-201ENST00000288840 UBR5O95071 2799 aaPredicted RBP11.44□□□□□ -0.58
SMAD6-201ENST00000288840 ANGP03950 147 aaKnown RBP11.44□□□□□ -0.58
SMAD6-201ENST00000288840 BAALC-AS2P0C853 105 aa11.44□□□□□ -0.58
SMAD6-201ENST00000288840 DEFB135Q30KP9 77 aa11.44□□□□□ -0.58
SMAD6-201ENST00000288840 AMELXQ99217 191 aa11.43□□□□□ -0.58
SMAD6-201ENST00000288840 EIF4EBP3O60516 100 aaPredicted RBP11.43□□□□□ -0.58
SMAD6-201ENST00000288840 C16orf74Q96GX8 76 aa11.42□□□□□ -0.58
SMAD6-201ENST00000288840 SPATA25Q9BR10 227 aa11.42□□□□□ -0.58
SMAD6-201ENST00000288840 TRAV4A0A0B4J268 109 aa11.41□□□□□ -0.58
SMAD6-201ENST00000288840 IFITM1P13164 125 aa11.41□□□□□ -0.58
SMAD6-201ENST00000288840 C11orf72Q8NBR9 251 aa11.41□□□□□ -0.58
SMAD6-201ENST00000288840 COX7B2Q8TF08 81 aa11.41□□□□□ -0.58
SMAD6-201ENST00000288840 SS18Q15532 418 aa11.41□□□□□ -0.58
SMAD6-201ENST00000288840 ATP6V0E2Q8NHE4 81 aa11.41□□□□□ -0.58
SMAD6-201ENST00000288840 TMEM86BQ8N661 226 aa11.4□□□□□ -0.58
SMAD6-201ENST00000288840 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.4□□□□□ -0.59
SMAD6-201ENST00000288840 CMC4P56277 68 aaPredicted RBP11.39□□□□□ -0.59
SMAD6-201ENST00000288840 PKIGQ9Y2B9 76 aa11.39□□□□□ -0.59
SMAD6-201ENST00000288840 TRAV25A0A0B4J276 109 aa11.38□□□□□ -0.59
SMAD6-201ENST00000288840 TRBV10-1A0A0K0K1A3 114 aa11.38□□□□□ -0.59
SMAD6-201ENST00000288840 H7C423 109 aa11.38□□□□□ -0.59
SMAD6-201ENST00000288840 DAD1P61803 113 aa11.38□□□□□ -0.59
SMAD6-201ENST00000288840 IGLV4-60A0A075B6I1 120 aa11.38□□□□□ -0.59
SMAD6-201ENST00000288840 TRBV30A0A0K0K1B3 111 aa11.38□□□□□ -0.59
SMAD6-201ENST00000288840 CDIP1Q9H305 208 aa11.38□□□□□ -0.59
SMAD6-201ENST00000288840 TEP1Q99973 2627 aaKnown RBP11.38□□□□□ -0.59
SMAD6-201ENST00000288840 NDUFA1O15239 70 aa11.37□□□□□ -0.59
SMAD6-201ENST00000288840 C5orf47Q569G3 176 aa11.37□□□□□ -0.59
SMAD6-201ENST00000288840 NTM-AS1Q6ZSK4 140 aa11.37□□□□□ -0.59
SMAD6-201ENST00000288840 LINC00526Q96FQ7 95 aa11.37□□□□□ -0.59
SMAD6-201ENST00000288840 VPS13CQ709C8 3753 aa11.37□□□□□ -0.59
SMAD6-201ENST00000288840 CDC42SE2Q9NRR3 84 aa11.37□□□□□ -0.59
SMAD6-201ENST00000288840 SMIM1B2RUZ4 78 aa11.36□□□□□ -0.59
SMAD6-201ENST00000288840 J3QKU1 62 aa11.36□□□□□ -0.59
SMAD6-201ENST00000288840 S100A7L2Q5SY68 101 aa11.36□□□□□ -0.59
SMAD6-201ENST00000288840 SLPIP03973 132 aa11.36□□□□□ -0.59
SMAD6-201ENST00000288840 TIRAPP58753 221 aa11.36□□□□□ -0.59
SMAD6-201ENST00000288840 APCP25054 2843 aa11.36□□□□□ -0.59
SMAD6-201ENST00000288840 NIPBLQ6KC79 2804 aaeCLIP11.36□□□□□ -0.59
SMAD6-201ENST00000288840 A0A096LNT2 108 aa11.35□□□□□ -0.59
SMAD6-201ENST00000288840 LECT2O14960 151 aa11.34□□□□□ -0.59
SMAD6-201ENST00000288840 ZFHX3Q15911 3703 aa11.34□□□□□ -0.59
SMAD6-201ENST00000288840 F8P00451 2351 aa11.34□□□□□ -0.59
SMAD6-201ENST00000288840 FAM222AQ5U5X8 452 aa11.34□□□□□ -0.59
SMAD6-201ENST00000288840 SPANXDQ9BXN6 97 aa11.34□□□□□ -0.59
SMAD6-201ENST00000288840 SPANXCQ9NY87 97 aa11.34□□□□□ -0.59
SMAD6-201ENST00000288840 TRAV13-2A0A0B4J235 113 aa11.33□□□□□ -0.6
SMAD6-201ENST00000288840 FHL3Q13643 280 aa11.33□□□□□ -0.6
SMAD6-201ENST00000288840 Q8N2B8 174 aa11.33□□□□□ -0.6
SMAD6-201ENST00000288840 TRBV6-8A0A0A6YYG3 113 aa11.33□□□□□ -0.6
SMAD6-201ENST00000288840 LRRC75A-AS1Q8N1F1 130 aa11.32□□□□□ -0.6
SMAD6-201ENST00000288840 LINC00269Q8N2A0 174 aa11.32□□□□□ -0.6
SMAD6-201ENST00000288840 PPDPFQ9H3Y8 114 aa11.32□□□□□ -0.6
SMAD6-201ENST00000288840 HIST1H4AP62805 103 aaKnown RBP11.32□□□□□ -0.6
SMAD6-201ENST00000288840 BEAN1Q3B7T3 259 aa11.32□□□□□ -0.6
SMAD6-201ENST00000288840 UNC79Q9P2D8 2635 aa11.31□□□□□ -0.6
SMAD6-201ENST00000288840 H3BT86 120 aa11.31□□□□□ -0.6
SMAD6-201ENST00000288840 LST1O00453 97 aa11.31□□□□□ -0.6
SMAD6-201ENST00000288840 COX7A2LO14548 114 aa11.31□□□□□ -0.6
SMAD6-201ENST00000288840 PRR3P79522 188 aaKnown RBP11.3□□□□□ -0.6
SMAD6-201ENST00000288840 IGKV3D-7A0A0C4DH55 119 aa11.29□□□□□ -0.6
SMAD6-201ENST00000288840 C14orf132Q9NPU4 83 aa11.29□□□□□ -0.6
SMAD6-201ENST00000288840 INAFM1C9JVW0 142 aa11.29□□□□□ -0.6
SMAD6-201ENST00000288840 SOSTDC1Q6X4U4 206 aa11.28□□□□□ -0.6
SMAD6-201ENST00000288840 LITAFQ99732 161 aa11.28□□□□□ -0.6
SMAD6-201ENST00000288840 FAM236AA0A1B0GUQ0 79 aa11.27□□□□□ -0.6
SMAD6-201ENST00000288840 FAM236BA0A1B0GV22 79 aa11.27□□□□□ -0.6
SMAD6-201ENST00000288840 FAM110AQ9BQ89 295 aa11.27□□□□□ -0.6
SMAD6-201ENST00000288840 KLK12Q9UKR0 248 aa11.27□□□□□ -0.6
SMAD6-201ENST00000288840 CCDC179H3BU77 68 aa11.27□□□□□ -0.61
SMAD6-201ENST00000288840 NCR3O14931 201 aa11.27□□□□□ -0.61
SMAD6-201ENST00000288840 FSHBP01225 129 aa11.27□□□□□ -0.61
SMAD6-201ENST00000288840 TRBV6-4A0A1B0GX49 114 aa11.27□□□□□ -0.61
SMAD6-201ENST00000288840 LAMTOR3Q9UHA4 124 aa11.27□□□□□ -0.61
SMAD6-201ENST00000288840 PRO0255Q9UI72 69 aa11.26□□□□□ -0.61
SMAD6-201ENST00000288840 MAST4O15021 2626 aa11.26□□□□□ -0.61
SMAD6-201ENST00000288840 C9orf116Q5BN46 136 aaPredicted RBP11.25□□□□□ -0.61
SMAD6-201ENST00000288840 IGLV1-51P01701 117 aa11.25□□□□□ -0.61
SMAD6-201ENST00000288840 NDUFV3P56181 108 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms