RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 Q6YL49 198 aa7.51□□□□□ -1.21
SKA1-201ENST00000285116 CXCL5P42830 114 aa7.51□□□□□ -1.21
SKA1-201ENST00000285116 SDIM1Q6ZPB5 146 aa7.51□□□□□ -1.21
SKA1-201ENST00000285116 SMCR5Q8TEV8 140 aa7.51□□□□□ -1.21
SKA1-201ENST00000285116 CITED2Q99967 270 aaPredicted RBP7.51□□□□□ -1.21
SKA1-201ENST00000285116 A8MZ25 164 aa7.5□□□□□ -1.21
SKA1-201ENST00000285116 CIRBPQ14011 172 aaKnown RBP7.5□□□□□ -1.21
SKA1-201ENST00000285116 C11orf72Q8NBR9 251 aa7.5□□□□□ -1.21
SKA1-201ENST00000285116 RBMY1BA6NDE4 496 aaKnown RBP7.49□□□□□ -1.21
SKA1-201ENST00000285116 RBMY1EA6NEQ0 496 aaKnown RBP7.49□□□□□ -1.21
SKA1-201ENST00000285116 NDUFA1O15239 70 aa7.49□□□□□ -1.21
SKA1-201ENST00000285116 RS1O15537 224 aa7.49□□□□□ -1.21
SKA1-201ENST00000285116 RBMY1DP0C7P1 496 aaKnown RBP7.49□□□□□ -1.21
SKA1-201ENST00000285116 PKD1L1Q8TDX9 2849 aa7.49□□□□□ -1.21
SKA1-201ENST00000285116 HERVK_113P63121 156 aa7.49□□□□□ -1.21
SKA1-201ENST00000285116 RNASE13Q5GAN3 156 aaKnown RBP7.49□□□□□ -1.21
SKA1-201ENST00000285116 PEMTQ9UBM1 199 aa7.49□□□□□ -1.21
SKA1-201ENST00000285116 TRACP01848 142 aa7.48□□□□□ -1.21
SKA1-201ENST00000285116 LRRC75A-AS1Q8N1F1 130 aa7.48□□□□□ -1.21
SKA1-201ENST00000285116 C5orf38Q86SI9 138 aa7.48□□□□□ -1.21
SKA1-201ENST00000285116 DAND5Q8N907 189 aa7.48□□□□□ -1.21
SKA1-201ENST00000285116 LINC00308Q8TCZ7 52 aa7.48□□□□□ -1.21
SKA1-201ENST00000285116 COPS9Q8WXC6 57 aa7.48□□□□□ -1.21
SKA1-201ENST00000285116 IGLV5-39A0A0G2JS06 123 aa7.48□□□□□ -1.21
SKA1-201ENST00000285116 A0A1B0GX51 115 aa7.48□□□□□ -1.21
SKA1-201ENST00000285116 COX7CP15954 63 aa7.48□□□□□ -1.21
SKA1-201ENST00000285116 DAZ2Q13117 558 aaKnown RBP7.48□□□□□ -1.21
SKA1-201ENST00000285116 DAZ4Q86SG3 579 aaKnown RBP7.48□□□□□ -1.21
SKA1-201ENST00000285116 IL17DQ8TAD2 202 aa7.48□□□□□ -1.21
SKA1-201ENST00000285116 DAZ3Q9NR90 486 aaKnown RBP7.48□□□□□ -1.21
SKA1-201ENST00000285116 CSDC2Q9Y534 153 aaKnown RBP7.48□□□□□ -1.21
SKA1-201ENST00000285116 MGAM2Q2M2H8 2515 aa7.47□□□□□ -1.21
SKA1-201ENST00000285116 KNCNA6PVL3 124 aa7.47□□□□□ -1.21
SKA1-201ENST00000285116 J3KT08 172 aa7.47□□□□□ -1.21
SKA1-201ENST00000285116 DEFB131AP59861 70 aa7.47□□□□□ -1.21
SKA1-201ENST00000285116 Q6ZSN1 163 aa7.47□□□□□ -1.21
SKA1-201ENST00000285116 C4orf3Q8WVX3 66 aa7.47□□□□□ -1.21
SKA1-201ENST00000285116 INAFM2P0DMQ5 153 aa7.46□□□□□ -1.21
SKA1-201ENST00000285116 PROK1P58294 105 aa7.46□□□□□ -1.21
SKA1-201ENST00000285116 FAM222AQ5U5X8 452 aa7.46□□□□□ -1.21
SKA1-201ENST00000285116 BAALC-AS2P0C853 105 aa7.46□□□□□ -1.22
SKA1-201ENST00000285116 INSP01308 110 aa7.45□□□□□ -1.22
SKA1-201ENST00000285116 MAP6D1Q9H9H5 199 aa7.45□□□□□ -1.22
SKA1-201ENST00000285116 CDKN2A-AS1Q9UH64 79 aa7.45□□□□□ -1.22
SKA1-201ENST00000285116 CRYGAP11844 174 aa7.45□□□□□ -1.22
SKA1-201ENST00000285116 IGHV3-73A0A0B4J1V6 119 aa7.45□□□□□ -1.22
SKA1-201ENST00000285116 C5orf47Q569G3 176 aa7.45□□□□□ -1.22
SKA1-201ENST00000285116 TRAV25A0A0B4J276 109 aa7.44□□□□□ -1.22
SKA1-201ENST00000285116 LOC107984640A0A0U1RRK4 108 aa7.44□□□□□ -1.22
SKA1-201ENST00000285116 ATOX1O00244 68 aa7.44□□□□□ -1.22
SKA1-201ENST00000285116 RPS28P62857 69 aaKnown RBP7.44□□□□□ -1.22
SKA1-201ENST00000285116 GAGE2AQ6NT46 116 aa7.44□□□□□ -1.22
SKA1-201ENST00000285116 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.44□□□□□ -1.22
SKA1-201ENST00000285116 TRBV10-1A0A0K0K1A3 114 aa7.44□□□□□ -1.22
SKA1-201ENST00000285116 IGKV2-29A2NJV5 120 aaPredicted RBP7.44□□□□□ -1.22
SKA1-201ENST00000285116 SLURP1P55000 103 aa7.44□□□□□ -1.22
SKA1-201ENST00000285116 HIST1H4AP62805 103 aaKnown RBP7.44□□□□□ -1.22
SKA1-201ENST00000285116 C2orf48Q96LS8 159 aa7.44□□□□□ -1.22
SKA1-201ENST00000285116 Q9H8V8 135 aa7.44□□□□□ -1.22
SKA1-201ENST00000285116 KLK5Q9Y337 293 aaPredicted RBP7.43□□□□□ -1.22
SKA1-201ENST00000285116 C22orf24Q9Y442 160 aa7.43□□□□□ -1.22
SKA1-201ENST00000285116 DEFB114Q30KQ6 69 aa7.42□□□□□ -1.22
SKA1-201ENST00000285116 Q9UF83 564 aa7.42□□□□□ -1.22
SKA1-201ENST00000285116 IGHV4-31P0DP07 118 aa7.42□□□□□ -1.22
SKA1-201ENST00000285116 FAM19A5Q7Z5A7 132 aaPredicted RBP7.42□□□□□ -1.22
SKA1-201ENST00000285116 IGHV3OR16-12A0A075B7B8 117 aa7.41□□□□□ -1.22
SKA1-201ENST00000285116 SMIM9A6NGZ8 99 aa7.41□□□□□ -1.22
SKA1-201ENST00000285116 SOSTDC1Q6X4U4 206 aa7.41□□□□□ -1.22
SKA1-201ENST00000285116 CR1P17927 2039 aa7.41□□□□□ -1.22
SKA1-201ENST00000285116 DEFB113Q30KQ7 82 aa7.41□□□□□ -1.22
SKA1-201ENST00000285116 LINC00242Q5T6M2 205 aa7.41□□□□□ -1.22
SKA1-201ENST00000285116 TMEM86BQ8N661 226 aa7.41□□□□□ -1.22
SKA1-201ENST00000285116 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.41□□□□□ -1.22
SKA1-201ENST00000285116 ZNF625Q96I27 306 aaPredicted RBP7.41□□□□□ -1.22
SKA1-201ENST00000285116 A0A0U1RRA0 63 aa7.4□□□□□ -1.22
SKA1-201ENST00000285116 MALP21145 153 aa7.4□□□□□ -1.22
SKA1-201ENST00000285116 DGAT2L7PQ6IED9 249 aa7.4□□□□□ -1.22
SKA1-201ENST00000285116 FAM218AQ96MZ4 157 aa7.4□□□□□ -1.22
SKA1-201ENST00000285116 ANK3Q12955 4377 aaKnown RBP7.4□□□□□ -1.22
SKA1-201ENST00000285116 COX6A2Q02221 97 aa7.4□□□□□ -1.23
SKA1-201ENST00000285116 SMIM1B2RUZ4 78 aa7.39□□□□□ -1.23
SKA1-201ENST00000285116 RPL18AQ02543 176 aaKnown RBP7.39□□□□□ -1.23
SKA1-201ENST00000285116 C18orf65Q6ZTR6 163 aa7.39□□□□□ -1.23
SKA1-201ENST00000285116 OR13C6PQ8NH95 151 aa7.39□□□□□ -1.23
SKA1-201ENST00000285116 OVOL2Q9BRP0 275 aa7.39□□□□□ -1.23
SKA1-201ENST00000285116 HTN1P15515 57 aa7.39□□□□□ -1.23
SKA1-201ENST00000285116 PRIMA1Q86XR5 153 aa7.39□□□□□ -1.23
SKA1-201ENST00000285116 DYNLRB2Q8TF09 96 aa7.39□□□□□ -1.23
SKA1-201ENST00000285116 F5H768 121 aa7.38□□□□□ -1.23
SKA1-201ENST00000285116 RPL28P46779 137 aaKnown RBP7.38□□□□□ -1.23
SKA1-201ENST00000285116 TRAV13-2A0A0B4J235 113 aa7.38□□□□□ -1.23
SKA1-201ENST00000285116 IGHV3-38A0A0C4DH36 116 aa7.38□□□□□ -1.23
SKA1-201ENST00000285116 hADV29S1A0JD25 119 aa7.38□□□□□ -1.23
SKA1-201ENST00000285116 K7EQD1 137 aa7.38□□□□□ -1.23
SKA1-201ENST00000285116 DNAL4O96015 105 aa7.38□□□□□ -1.23
SKA1-201ENST00000285116 DEFB136Q30KP8 78 aa7.38□□□□□ -1.23
SKA1-201ENST00000285116 RPL36AP83881 106 aaKnown RBP7.38□□□□□ -1.23
SKA1-201ENST00000285116 ODF3L2Q3SX64 289 aa7.38□□□□□ -1.23
SKA1-201ENST00000285116 C1orf158Q8N1D5 194 aa7.38□□□□□ -1.23
SKA1-201ENST00000285116 RPL36ALQ969Q0 106 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms