RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 Q8N3U1 123 aa11.19□□□□□ -0.62
TPM1-201ENST00000267996 IGHV3OR16-9A0A0B4J2B5 98 aa11.18□□□□□ -0.62
TPM1-201ENST00000267996 CCL25O15444 150 aa11.18□□□□□ -0.62
TPM1-201ENST00000267996 ESRGQ1W209 222 aa11.18□□□□□ -0.62
TPM1-201ENST00000267996 IGKV3OR2-268A0A0C4DH90 116 aa11.17□□□□□ -0.62
TPM1-201ENST00000267996 SMIM1B2RUZ4 78 aa11.17□□□□□ -0.62
TPM1-201ENST00000267996 NHLRC4P0CG21 123 aaPredicted RBP11.17□□□□□ -0.62
TPM1-201ENST00000267996 C15orf53Q8NAA6 179 aa11.17□□□□□ -0.62
TPM1-201ENST00000267996 STAB2Q8WWQ8 2551 aa11.17□□□□□ -0.62
TPM1-201ENST00000267996 BATFQ16520 125 aa11.17□□□□□ -0.62
TPM1-201ENST00000267996 LINC00269Q8N2A0 174 aa11.17□□□□□ -0.62
TPM1-201ENST00000267996 ANGP03950 147 aaKnown RBP11.16□□□□□ -0.62
TPM1-201ENST00000267996 SS18Q15532 418 aa11.16□□□□□ -0.62
TPM1-201ENST00000267996 COL7A1Q02388 2944 aa11.16□□□□□ -0.62
TPM1-201ENST00000267996 PRKDCP78527 4128 aaKnown RBP11.15□□□□□ -0.62
TPM1-201ENST00000267996 TAL2Q16559 108 aa11.15□□□□□ -0.62
TPM1-201ENST00000267996 ZFAND6Q6FIF0 208 aa11.15□□□□□ -0.62
TPM1-201ENST00000267996 A0A087WZ39 114 aa11.14□□□□□ -0.63
TPM1-201ENST00000267996 PRR34Q9NV39 138 aa11.14□□□□□ -0.63
TPM1-201ENST00000267996 REG3AQ06141 175 aa11.14□□□□□ -0.63
TPM1-201ENST00000267996 COL5A1-AS1Q5SY13 56 aa11.14□□□□□ -0.63
TPM1-201ENST00000267996 CLPSL2Q6UWE3 100 aa11.14□□□□□ -0.63
TPM1-201ENST00000267996 SCGB1D4Q6XE38 83 aa11.14□□□□□ -0.63
TPM1-201ENST00000267996 WFDC10BQ8IUB3 73 aa11.14□□□□□ -0.63
TPM1-201ENST00000267996 C10orf126Q8N4M7 172 aa11.14□□□□□ -0.63
TPM1-201ENST00000267996 NDUFA12Q9UI09 145 aa11.13□□□□□ -0.63
TPM1-201ENST00000267996 DYNC2H1Q8NCM8 4307 aaKnown RBP11.13□□□□□ -0.63
TPM1-201ENST00000267996 LINC01561Q8N1V8 128 aa11.12□□□□□ -0.63
TPM1-201ENST00000267996 ORAOV1Q8WV07 137 aa11.12□□□□□ -0.63
TPM1-201ENST00000267996 TM2D2Q9BX73 214 aa11.12□□□□□ -0.63
TPM1-201ENST00000267996 NDUFA1O15239 70 aa11.11□□□□□ -0.63
TPM1-201ENST00000267996 SPANXB1Q9NS25 103 aaPredicted RBP11.11□□□□□ -0.63
TPM1-201ENST00000267996 A0A0J9YXY3 114 aa11.11□□□□□ -0.63
TPM1-201ENST00000267996 XCL1P47992 114 aa11.11□□□□□ -0.63
TPM1-201ENST00000267996 CD164L2Q6UWJ8 174 aa11.11□□□□□ -0.63
TPM1-201ENST00000267996 CEND1Q8N111 149 aa11.11□□□□□ -0.63
TPM1-201ENST00000267996 KLK12Q9UKR0 248 aa11.11□□□□□ -0.63
TPM1-201ENST00000267996 C5orf38Q86SI9 138 aa11.1□□□□□ -0.63
TPM1-201ENST00000267996 CHCHD10Q8WYQ3 142 aaPredicted RBP11.1□□□□□ -0.63
TPM1-201ENST00000267996 HIST1H4GQ99525 98 aa11.1□□□□□ -0.63
TPM1-201ENST00000267996 IGHV3-30P01768 117 aa11.09□□□□□ -0.63
TPM1-201ENST00000267996 IGHV3-33P01772 117 aa11.09□□□□□ -0.63
TPM1-201ENST00000267996 IGHV3-30-5P0DP03 117 aa11.09□□□□□ -0.63
TPM1-201ENST00000267996 LINC01556Q5JQF7 62 aa11.09□□□□□ -0.63
TPM1-201ENST00000267996 ENHOQ6UWT2 76 aa11.09□□□□□ -0.63
TPM1-201ENST00000267996 IGLL5B9A064 214 aa11.08□□□□□ -0.64
TPM1-201ENST00000267996 GCSHP23434 173 aa11.08□□□□□ -0.64
TPM1-201ENST00000267996 FXYD2P54710 66 aa11.08□□□□□ -0.64
TPM1-201ENST00000267996 ZNF625Q96I27 306 aaPredicted RBP11.08□□□□□ -0.64
TPM1-201ENST00000267996 COX7B2Q8TF08 81 aa11.07□□□□□ -0.64
TPM1-201ENST00000267996 LITAFQ99732 161 aa11.07□□□□□ -0.64
TPM1-201ENST00000267996 LINC00588Q9Y4M8 146 aa11.07□□□□□ -0.64
TPM1-201ENST00000267996 MEGF8Q7Z7M0 2845 aa11.07□□□□□ -0.64
TPM1-201ENST00000267996 TIMM17BO60830 172 aa11.06□□□□□ -0.64
TPM1-201ENST00000267996 DNAH10OSP0CZ25 163 aa11.06□□□□□ -0.64
TPM1-201ENST00000267996 FOXI1Q12951 378 aa11.06□□□□□ -0.64
TPM1-201ENST00000267996 Q9H8V8 135 aa11.06□□□□□ -0.64
TPM1-201ENST00000267996 IGLV10-54A0A075B6I4 117 aa11.05□□□□□ -0.64
TPM1-201ENST00000267996 TRAV8-4A0A0B4J246 113 aa11.05□□□□□ -0.64
TPM1-201ENST00000267996 K7EP13 123 aa11.05□□□□□ -0.64
TPM1-201ENST00000267996 COX7A2LO14548 114 aa11.05□□□□□ -0.64
TPM1-201ENST00000267996 SRSF9Q13242 221 aaKnown RBP eCLIP11.05□□□□□ -0.64
TPM1-201ENST00000267996 A6NDN8 102 aa11.04□□□□□ -0.64
TPM1-201ENST00000267996 TMEM238C9JI98 176 aa11.04□□□□□ -0.64
TPM1-201ENST00000267996 CCL18P55774 89 aa11.04□□□□□ -0.64
TPM1-201ENST00000267996 UBE2WQ96B02 151 aa11.04□□□□□ -0.64
TPM1-201ENST00000267996 HERV-K104P63124 156 aa11.04□□□□□ -0.64
TPM1-201ENST00000267996 MIAQ16674 131 aa11.04□□□□□ -0.64
TPM1-201ENST00000267996 A0A1B0GV90 55 aa11.03□□□□□ -0.64
TPM1-201ENST00000267996 TAX1BP3O14907 124 aa11.03□□□□□ -0.64
TPM1-201ENST00000267996 CRPP02741 224 aa11.03□□□□□ -0.64
TPM1-201ENST00000267996 UPK3BQ9BT76 320 aa11.03□□□□□ -0.64
TPM1-201ENST00000267996 GAGE12HA6NDE8 117 aa11.02□□□□□ -0.64
TPM1-201ENST00000267996 PTTG1IPP53801 180 aa11.02□□□□□ -0.64
TPM1-201ENST00000267996 SPANXDQ9BXN6 97 aa11.02□□□□□ -0.64
TPM1-201ENST00000267996 SPANXCQ9NY87 97 aa11.02□□□□□ -0.64
TPM1-201ENST00000267996 ADAMTSL4-AS1Q5T5F5 129 aa11.01□□□□□ -0.65
TPM1-201ENST00000267996 KRTAP26-1Q6PEX3 210 aa11.01□□□□□ -0.65
TPM1-201ENST00000267996 Q6ZVH6 145 aa11.01□□□□□ -0.65
TPM1-201ENST00000267996 Q8IZM0 81 aa11.01□□□□□ -0.65
TPM1-201ENST00000267996 TOMM7Q9P0U1 55 aa11.01□□□□□ -0.65
TPM1-201ENST00000267996 A0A1B0GWB2 263 aa11.01□□□□□ -0.65
TPM1-201ENST00000267996 APLNQ9ULZ1 77 aa11.01□□□□□ -0.65
TPM1-201ENST00000267996 KIAA0087Q14695 138 aa11□□□□□ -0.65
TPM1-201ENST00000267996 SFTA2Q6UW10 78 aa11□□□□□ -0.65
TPM1-201ENST00000267996 KLK5Q9Y337 293 aaPredicted RBP10.99□□□□□ -0.65
TPM1-201ENST00000267996 DNAH1Q9P2D7 4330 aa10.99□□□□□ -0.65
TPM1-201ENST00000267996 DNAH7Q8WXX0 4024 aa10.99□□□□□ -0.65
TPM1-201ENST00000267996 TMEM238LA0A1B0GVL6 79 aa10.98□□□□□ -0.65
TPM1-201ENST00000267996 A6NJY4 79 aa10.98□□□□□ -0.65
TPM1-201ENST00000267996 SMIM13P0DJ93 91 aa10.98□□□□□ -0.65
TPM1-201ENST00000267996 MALP21145 153 aa10.98□□□□□ -0.65
TPM1-201ENST00000267996 CIRBPQ14011 172 aaKnown RBP10.98□□□□□ -0.65
TPM1-201ENST00000267996 NHP2Q9NX24 153 aaKnown RBP10.98□□□□□ -0.65
TPM1-201ENST00000267996 COX11Q9Y6N1 276 aa10.98□□□□□ -0.65
TPM1-201ENST00000267996 C6orf226Q5I0X4 101 aa10.98□□□□□ -0.65
TPM1-201ENST00000267996 MUSTN1Q8IVN3 82 aa10.98□□□□□ -0.65
TPM1-201ENST00000267996 NUPR2A6NF83 97 aa10.97□□□□□ -0.65
TPM1-201ENST00000267996 PRSS2P07478 247 aa10.97□□□□□ -0.65
TPM1-201ENST00000267996 IBA57-AS1B1ANH7 110 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms