RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 SPANXA1Q9NS26 97 aa7.37□□□□□ -1.23
PALB2-201ENST00000261584 MAP6D1Q9H9H5 199 aa7.36□□□□□ -1.23
PALB2-201ENST00000261584 NBL1P41271 181 aa7.36□□□□□ -1.23
PALB2-201ENST00000261584 RPL32P62910 135 aaKnown RBP7.36□□□□□ -1.23
PALB2-201ENST00000261584 UBR5O95071 2799 aaPredicted RBP7.36□□□□□ -1.23
PALB2-201ENST00000261584 TRAV23DV6A0A075B6W5 121 aa7.36□□□□□ -1.23
PALB2-201ENST00000261584 ANGP03950 147 aaKnown RBP7.36□□□□□ -1.23
PALB2-201ENST00000261584 MED14OSP0DP75 135 aa7.36□□□□□ -1.23
PALB2-201ENST00000261584 LOC107984640A0A0U1RRK4 108 aa7.35□□□□□ -1.23
PALB2-201ENST00000261584 SHISA2Q6UWI4 295 aa7.35□□□□□ -1.23
PALB2-201ENST00000261584 TMEM126AQ9H061 195 aa7.35□□□□□ -1.23
PALB2-201ENST00000261584 UBE2D4Q9Y2X8 147 aa7.35□□□□□ -1.23
PALB2-201ENST00000261584 C9orf85Q96MD7 179 aa7.35□□□□□ -1.23
PALB2-201ENST00000261584 TRBV30A0A0K0K1B3 111 aa7.34□□□□□ -1.23
PALB2-201ENST00000261584 H3BT86 120 aa7.34□□□□□ -1.23
PALB2-201ENST00000261584 K7EMT4 169 aa7.34□□□□□ -1.23
PALB2-201ENST00000261584 PSMB8P28062 276 aa7.34□□□□□ -1.23
PALB2-201ENST00000261584 SCXQ7RTU7 201 aa7.34□□□□□ -1.23
PALB2-201ENST00000261584 ODF3Q96PU9 254 aa7.34□□□□□ -1.24
PALB2-201ENST00000261584 UNC79Q9P2D8 2635 aa7.34□□□□□ -1.24
PALB2-201ENST00000261584 K7EQD1 137 aa7.33□□□□□ -1.24
PALB2-201ENST00000261584 LST1O00453 97 aa7.33□□□□□ -1.24
PALB2-201ENST00000261584 CCL24O00175 119 aa7.33□□□□□ -1.24
PALB2-201ENST00000261584 TIRAPP58753 221 aa7.33□□□□□ -1.24
PALB2-201ENST00000261584 COX7B2Q8TF08 81 aa7.33□□□□□ -1.24
PALB2-201ENST00000261584 MGAM2Q2M2H8 2515 aa7.33□□□□□ -1.24
PALB2-201ENST00000261584 INAFM2P0DMQ5 153 aa7.33□□□□□ -1.24
PALB2-201ENST00000261584 GYPEP15421 78 aa7.33□□□□□ -1.24
PALB2-201ENST00000261584 CITED2Q99967 270 aaPredicted RBP7.33□□□□□ -1.24
PALB2-201ENST00000261584 H3BUA1 57 aa7.32□□□□□ -1.24
PALB2-201ENST00000261584 COX7A2LO14548 114 aa7.32□□□□□ -1.24
PALB2-201ENST00000261584 LINC00242Q5T6M2 205 aa7.32□□□□□ -1.24
PALB2-201ENST00000261584 TRBV6-5A0A0K0K1A5 114 aa7.32□□□□□ -1.24
PALB2-201ENST00000261584 F5H768 121 aa7.32□□□□□ -1.24
PALB2-201ENST00000261584 NBEAL1Q6ZS30 2694 aa7.31□□□□□ -1.24
PALB2-201ENST00000261584 A8MTW9 85 aa7.31□□□□□ -1.24
PALB2-201ENST00000261584 KRTAP10-9P60411 292 aa7.31□□□□□ -1.24
PALB2-201ENST00000261584 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.31□□□□□ -1.24
PALB2-201ENST00000261584 TRAV13-2A0A0B4J235 113 aa7.31□□□□□ -1.24
PALB2-201ENST00000261584 IGLV1-40P01703 118 aa7.31□□□□□ -1.24
PALB2-201ENST00000261584 MRPS36P82909 103 aaKnown RBP7.31□□□□□ -1.24
PALB2-201ENST00000261584 CHCHD7Q9BUK0 85 aa7.31□□□□□ -1.24
PALB2-201ENST00000261584 TEP1Q99973 2627 aaKnown RBP7.31□□□□□ -1.24
PALB2-201ENST00000261584 DAD1P61803 113 aa7.3□□□□□ -1.24
PALB2-201ENST00000261584 TRAV25A0A0B4J276 109 aa7.3□□□□□ -1.24
PALB2-201ENST00000261584 C9orf116Q5BN46 136 aaPredicted RBP7.3□□□□□ -1.24
PALB2-201ENST00000261584 NIPBLQ6KC79 2804 aaeCLIP7.3□□□□□ -1.24
PALB2-201ENST00000261584 SS18Q15532 418 aa7.3□□□□□ -1.24
PALB2-201ENST00000261584 TRACP01848 142 aa7.3□□□□□ -1.24
PALB2-201ENST00000261584 LINC00269Q8N2A0 174 aa7.3□□□□□ -1.24
PALB2-201ENST00000261584 PPDPFQ9H3Y8 114 aa7.3□□□□□ -1.24
PALB2-201ENST00000261584 A0A087WYN8 130 aa7.29□□□□□ -1.24
PALB2-201ENST00000261584 IGHV4-28A0A0C4DH34 117 aa7.29□□□□□ -1.24
PALB2-201ENST00000261584 DEFB105AQ8NG35 78 aa7.29□□□□□ -1.24
PALB2-201ENST00000261584 IGSF10Q6WRI0 2623 aa7.29□□□□□ -1.24
PALB2-201ENST00000261584 LINC01546A6NGU7 62 aa7.29□□□□□ -1.24
PALB2-201ENST00000261584 RNF152Q8N8N0 203 aa7.29□□□□□ -1.24
PALB2-201ENST00000261584 AMELXQ99217 191 aa7.29□□□□□ -1.24
PALB2-201ENST00000261584 DEFB114Q30KQ6 69 aa7.28□□□□□ -1.24
PALB2-201ENST00000261584 SMIM11BQ8TCY0 68 aa7.28□□□□□ -1.24
PALB2-201ENST00000261584 IGLV4-60A0A075B6I1 120 aa7.28□□□□□ -1.24
PALB2-201ENST00000261584 SOSTDC1Q6X4U4 206 aa7.28□□□□□ -1.24
PALB2-201ENST00000261584 LINC00482Q8N8I6 264 aa7.28□□□□□ -1.24
PALB2-201ENST00000261584 DSCR8Q96T75 97 aa7.28□□□□□ -1.24
PALB2-201ENST00000261584 CSMD2Q7Z408 3487 aa7.28□□□□□ -1.24
PALB2-201ENST00000261584 NDUFA1O15239 70 aa7.28□□□□□ -1.24
PALB2-201ENST00000261584 C20orf197Q8N268 126 aa7.28□□□□□ -1.24
PALB2-201ENST00000261584 FAM218AQ96MZ4 157 aa7.28□□□□□ -1.24
PALB2-201ENST00000261584 XAGE1AQ9HD64 81 aa7.28□□□□□ -1.24
PALB2-201ENST00000261584 SMIM1B2RUZ4 78 aa7.27□□□□□ -1.25
PALB2-201ENST00000261584 NHLRC4P0CG21 123 aaPredicted RBP7.27□□□□□ -1.25
PALB2-201ENST00000261584 LINC00643Q86TS7 51 aa7.27□□□□□ -1.25
PALB2-201ENST00000261584 CXCL5P42830 114 aa7.27□□□□□ -1.25
PALB2-201ENST00000261584 DEFB135Q30KP9 77 aa7.27□□□□□ -1.25
PALB2-201ENST00000261584 ENHOQ6UWT2 76 aa7.27□□□□□ -1.25
PALB2-201ENST00000261584 M0QXV9 152 aa7.26□□□□□ -1.25
PALB2-201ENST00000261584 ORMDL1Q9P0S3 153 aa7.26□□□□□ -1.25
PALB2-201ENST00000261584 MAST4O15021 2626 aa7.26□□□□□ -1.25
PALB2-201ENST00000261584 RPL18AQ02543 176 aaKnown RBP7.26□□□□□ -1.25
PALB2-201ENST00000261584 ODF3L2Q3SX64 289 aa7.25□□□□□ -1.25
PALB2-201ENST00000261584 ZNF702PQ9H963 129 aa7.25□□□□□ -1.25
PALB2-201ENST00000261584 HILS1P60008 231 aa7.25□□□□□ -1.25
PALB2-201ENST00000261584 UBL5Q9BZL1 73 aa7.25□□□□□ -1.25
PALB2-201ENST00000261584 NOTCH1P46531 2555 aa7.25□□□□□ -1.25
PALB2-201ENST00000261584 CCL18P55774 89 aa7.25□□□□□ -1.25
PALB2-201ENST00000261584 PYGO1Q9Y3Y4 419 aa7.24□□□□□ -1.25
PALB2-201ENST00000261584 LINC00337Q8N6G1 96 aa7.24□□□□□ -1.25
PALB2-201ENST00000261584 SPANXDQ9BXN6 97 aa7.24□□□□□ -1.25
PALB2-201ENST00000261584 SPANXCQ9NY87 97 aa7.24□□□□□ -1.25
PALB2-201ENST00000261584 TMEM89A2RUT3 159 aa7.24□□□□□ -1.25
PALB2-201ENST00000261584 GHRHP01286 108 aa7.24□□□□□ -1.25
PALB2-201ENST00000261584 MXRA5Q9NR99 2828 aa7.24□□□□□ -1.25
PALB2-201ENST00000261584 KLK12Q9UKR0 248 aa7.24□□□□□ -1.25
PALB2-201ENST00000261584 C1orf158Q8N1D5 194 aa7.23□□□□□ -1.25
PALB2-201ENST00000261584 HELZ2Q9BYK8 2649 aaKnown RBP7.23□□□□□ -1.25
PALB2-201ENST00000261584 C6orf99Q4VX62 202 aa7.23□□□□□ -1.25
PALB2-201ENST00000261584 SNURFQ9Y675 71 aa7.23□□□□□ -1.25
PALB2-201ENST00000261584 HIGD2BQ4VC39 106 aa7.23□□□□□ -1.25
PALB2-201ENST00000261584 NTM-AS1Q6ZSK4 140 aa7.23□□□□□ -1.25
PALB2-201ENST00000261584 C3orf22Q8N5N4 141 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms