RNA–Protein interactions for RNA: ENST00000259808.8

RIPK1-201, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RIPK1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-201ENST00000259808 LAMA5O15230 3695 aa11.12□□□□□ -0.63
RIPK1-201ENST00000259808 SMR3AQ99954 134 aa11.12□□□□□ -0.63
RIPK1-201ENST00000259808 PRB2P02812 416 aaPredicted RBP11.12□□□□□ -0.63
RIPK1-201ENST00000259808 RNF152Q8N8N0 203 aa11.11□□□□□ -0.63
RIPK1-201ENST00000259808 NKAPP1Q8N9T2 125 aa11.11□□□□□ -0.63
RIPK1-201ENST00000259808 HIGD2BQ4VC39 106 aa11.11□□□□□ -0.63
RIPK1-201ENST00000259808 C9orf85Q96MD7 179 aa11.11□□□□□ -0.63
RIPK1-201ENST00000259808 IGLV4-69A0A075B6H9 119 aa11.1□□□□□ -0.63
RIPK1-201ENST00000259808 MRPL23Q16540 153 aaKnown RBP11.1□□□□□ -0.63
RIPK1-201ENST00000259808 CAMK2N2Q96S95 79 aa11.1□□□□□ -0.63
RIPK1-201ENST00000259808 Q6ZSN1 163 aa11.1□□□□□ -0.63
RIPK1-201ENST00000259808 RPL18AQ02543 176 aaKnown RBP11.09□□□□□ -0.63
RIPK1-201ENST00000259808 DSCR8Q96T75 97 aa11.09□□□□□ -0.63
RIPK1-201ENST00000259808 TMEM126AQ9H061 195 aa11.09□□□□□ -0.63
RIPK1-201ENST00000259808 XAGE1AQ9HD64 81 aa11.09□□□□□ -0.63
RIPK1-201ENST00000259808 A0A0B4J2C4 111 aa11.09□□□□□ -0.63
RIPK1-201ENST00000259808 TMEM89A2RUT3 159 aa11.09□□□□□ -0.63
RIPK1-201ENST00000259808 TRBV6-5A0A0K0K1A5 114 aa11.09□□□□□ -0.63
RIPK1-201ENST00000259808 A0A1B0GX51 115 aa11.09□□□□□ -0.63
RIPK1-201ENST00000259808 SPAG11BQ08648 103 aa11.09□□□□□ -0.63
RIPK1-201ENST00000259808 LINC00694P0DN24 101 aa11.08□□□□□ -0.64
RIPK1-201ENST00000259808 PSMG3-AS1Q96PY0 264 aa11.08□□□□□ -0.64
RIPK1-201ENST00000259808 H3BT86 120 aa11.08□□□□□ -0.64
RIPK1-201ENST00000259808 FAM110AQ9BQ89 295 aa11.08□□□□□ -0.64
RIPK1-201ENST00000259808 IGSF10Q6WRI0 2623 aa11.08□□□□□ -0.64
RIPK1-201ENST00000259808 ADAMTSL4-AS1Q5T5F5 129 aa11.08□□□□□ -0.64
RIPK1-201ENST00000259808 TRBV10-1A0A0K0K1A3 114 aa11.07□□□□□ -0.64
RIPK1-201ENST00000259808 ODF3L2Q3SX64 289 aa11.07□□□□□ -0.64
RIPK1-201ENST00000259808 SDIM1Q6ZPB5 146 aa11.07□□□□□ -0.64
RIPK1-201ENST00000259808 PRO0255Q9UI72 69 aa11.07□□□□□ -0.64
RIPK1-201ENST00000259808 UBE2D4Q9Y2X8 147 aa11.07□□□□□ -0.64
RIPK1-201ENST00000259808 SPART-AS1P0CW21 52 aa11.07□□□□□ -0.64
RIPK1-201ENST00000259808 ASH1LQ9NR48 2969 aaKnown RBP11.07□□□□□ -0.64
RIPK1-201ENST00000259808 ODF3Q96PU9 254 aa11.06□□□□□ -0.64
RIPK1-201ENST00000259808 LINC01006Q8NI28 216 aa11.06□□□□□ -0.64
RIPK1-201ENST00000259808 GHRHP01286 108 aa11.06□□□□□ -0.64
RIPK1-201ENST00000259808 INAFM1C9JVW0 142 aa11.05□□□□□ -0.64
RIPK1-201ENST00000259808 C1orf43Q9BWL3 253 aa11.05□□□□□ -0.64
RIPK1-201ENST00000259808 COX6A2Q02221 97 aa11.05□□□□□ -0.64
RIPK1-201ENST00000259808 ITPR1Q14643 2758 aa11.04□□□□□ -0.64
RIPK1-201ENST00000259808 H0YGX0 51 aa11.04□□□□□ -0.64
RIPK1-201ENST00000259808 TRACP01848 142 aa11.04□□□□□ -0.64
RIPK1-201ENST00000259808 NDUFV3P56181 108 aaKnown RBP11.03□□□□□ -0.64
RIPK1-201ENST00000259808 NBEAL2Q6ZNJ1 2754 aa11.03□□□□□ -0.64
RIPK1-201ENST00000259808 SPANXCQ9NY87 97 aa11.02□□□□□ -0.64
RIPK1-201ENST00000259808 UBE2D1P51668 147 aa11.02□□□□□ -0.65
RIPK1-201ENST00000259808 TRBV6-8A0A0A6YYG3 113 aa11.02□□□□□ -0.65
RIPK1-201ENST00000259808 hADV29S1A0JD25 119 aa11.02□□□□□ -0.65
RIPK1-201ENST00000259808 LINC00242Q5T6M2 205 aa11.02□□□□□ -0.65
RIPK1-201ENST00000259808 C9orf66Q5T8R8 295 aa11.02□□□□□ -0.65
RIPK1-201ENST00000259808 SCXQ7RTU7 201 aa11.02□□□□□ -0.65
RIPK1-201ENST00000259808 COX8CQ7Z4L0 72 aa11.02□□□□□ -0.65
RIPK1-201ENST00000259808 GCN1Q92616 2671 aaKnown RBP11.02□□□□□ -0.65
RIPK1-201ENST00000259808 TRAV23DV6A0A075B6W5 121 aa11.01□□□□□ -0.65
RIPK1-201ENST00000259808 RPL32P62910 135 aaKnown RBP11.01□□□□□ -0.65
RIPK1-201ENST00000259808 PRR3P79522 188 aaKnown RBP11.01□□□□□ -0.65
RIPK1-201ENST00000259808 REG3AQ06141 175 aa11.01□□□□□ -0.65
RIPK1-201ENST00000259808 TEX15Q9BXT5 2789 aa11.01□□□□□ -0.65
RIPK1-201ENST00000259808 RELNP78509 3460 aa11.01□□□□□ -0.65
RIPK1-201ENST00000259808 CHCHD10Q8WYQ3 142 aaPredicted RBP11.01□□□□□ -0.65
RIPK1-201ENST00000259808 TRBV30A0A0K0K1B3 111 aa11□□□□□ -0.65
RIPK1-201ENST00000259808 NDUFA1O15239 70 aa11□□□□□ -0.65
RIPK1-201ENST00000259808 F8WEM9 126 aa10.99□□□□□ -0.65
RIPK1-201ENST00000259808 RBMY1FQ15415 496 aaKnown RBP10.99□□□□□ -0.65
RIPK1-201ENST00000259808 PYGO1Q9Y3Y4 419 aa10.99□□□□□ -0.65
RIPK1-201ENST00000259808 H7C423 109 aa10.99□□□□□ -0.65
RIPK1-201ENST00000259808 MRPS36P82909 103 aaKnown RBP10.98□□□□□ -0.65
RIPK1-201ENST00000259808 C6orf99Q4VX62 202 aa10.98□□□□□ -0.65
RIPK1-201ENST00000259808 C9orf116Q5BN46 136 aaPredicted RBP10.98□□□□□ -0.65
RIPK1-201ENST00000259808 CLUHP3Q96NS8 147 aa10.98□□□□□ -0.65
RIPK1-201ENST00000259808 C1orf158Q8N1D5 194 aa10.98□□□□□ -0.65
RIPK1-201ENST00000259808 IGLV4-60A0A075B6I1 120 aa10.97□□□□□ -0.65
RIPK1-201ENST00000259808 UBE2BP63146 152 aa10.97□□□□□ -0.65
RIPK1-201ENST00000259808 KIF25-AS1Q9Y6Z4 181 aa10.97□□□□□ -0.65
RIPK1-201ENST00000259808 COL27A1Q8IZC6 1860 aaPredicted RBP10.97□□□□□ -0.65
RIPK1-201ENST00000259808 ACYP1P07311 99 aa10.96□□□□□ -0.65
RIPK1-201ENST00000259808 TIRAPP58753 221 aa10.96□□□□□ -0.65
RIPK1-201ENST00000259808 NBEAL1Q6ZS30 2694 aa10.96□□□□□ -0.65
RIPK1-201ENST00000259808 CHCHD7Q9BUK0 85 aa10.96□□□□□ -0.65
RIPK1-201ENST00000259808 CCDC179H3BU77 68 aa10.95□□□□□ -0.66
RIPK1-201ENST00000259808 UBR5O95071 2799 aaPredicted RBP10.95□□□□□ -0.66
RIPK1-201ENST00000259808 LINC00315P59091 139 aa10.95□□□□□ -0.66
RIPK1-201ENST00000259808 CDC42SE2Q9NRR3 84 aa10.95□□□□□ -0.66
RIPK1-201ENST00000259808 LST1O00453 97 aa10.95□□□□□ -0.66
RIPK1-201ENST00000259808 WFDC9Q8NEX5 89 aa10.95□□□□□ -0.66
RIPK1-201ENST00000259808 SMIM11BQ8TCY0 68 aa10.94□□□□□ -0.66
RIPK1-201ENST00000259808 ZFHX4Q86UP3 3567 aa10.94□□□□□ -0.66
RIPK1-201ENST00000259808 SPATA25Q9BR10 227 aa10.94□□□□□ -0.66
RIPK1-201ENST00000259808 SETXQ7Z333 2677 aaKnown RBP10.93□□□□□ -0.66
RIPK1-201ENST00000259808 NOTCH1P46531 2555 aa10.93□□□□□ -0.66
RIPK1-201ENST00000259808 RBM3P98179 157 aaKnown RBP10.93□□□□□ -0.66
RIPK1-201ENST00000259808 LINC00643Q86TS7 51 aa10.93□□□□□ -0.66
RIPK1-201ENST00000259808 SMIM1B2RUZ4 78 aa10.93□□□□□ -0.66
RIPK1-201ENST00000259808 CCL18P55774 89 aa10.93□□□□□ -0.66
RIPK1-201ENST00000259808 CITED1Q99966 193 aa10.92□□□□□ -0.66
RIPK1-201ENST00000259808 IGKV2-24A0A0C4DH68 120 aa10.92□□□□□ -0.66
RIPK1-201ENST00000259808 UBE2D3P61077 147 aa10.92□□□□□ -0.66
RIPK1-201ENST00000259808 UBE2D2P62837 147 aa10.92□□□□□ -0.66
RIPK1-201ENST00000259808 A0A096LNI7 61 aa10.92□□□□□ -0.66
RIPK1-201ENST00000259808 TRBV6-4A0A1B0GX49 114 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms