RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 TIRAPP58753 221 aa11.98□□□□□ -0.49
SRSF1-201ENST00000258962 APLNQ9ULZ1 77 aa11.98□□□□□ -0.49
SRSF1-201ENST00000258962 H3BRM9 83 aa11.97□□□□□ -0.49
SRSF1-201ENST00000258962 LGALS3P17931 250 aaKnown RBP11.97□□□□□ -0.49
SRSF1-201ENST00000258962 FAM19A3Q7Z5A8 133 aa11.97□□□□□ -0.49
SRSF1-201ENST00000258962 ORAOV1Q8WV07 137 aa11.97□□□□□ -0.49
SRSF1-201ENST00000258962 ZNF815PA8K554 130 aa11.96□□□□□ -0.49
SRSF1-201ENST00000258962 HERVK_113P63121 156 aa11.96□□□□□ -0.49
SRSF1-201ENST00000258962 LINC00242Q5T6M2 205 aa11.96□□□□□ -0.49
SRSF1-201ENST00000258962 MAPKAPK5-AS1Q8N8E1 139 aa11.96□□□□□ -0.49
SRSF1-201ENST00000258962 A0A1B0GV90 55 aa11.96□□□□□ -0.5
SRSF1-201ENST00000258962 RBX1P62877 108 aa11.96□□□□□ -0.5
SRSF1-201ENST00000258962 LELP1Q5T871 98 aa11.96□□□□□ -0.5
SRSF1-201ENST00000258962 IGLV5-45A0A087WSX0 123 aa11.95□□□□□ -0.5
SRSF1-201ENST00000258962 TRAV13-1A0A0B4J241 112 aa11.95□□□□□ -0.5
SRSF1-201ENST00000258962 A0A1B0GUV1 79 aa11.95□□□□□ -0.5
SRSF1-201ENST00000258962 TMEM262E9PQX1 116 aa11.95□□□□□ -0.5
SRSF1-201ENST00000258962 J3QQQ9 107 aa11.95□□□□□ -0.5
SRSF1-201ENST00000258962 COX6A2Q02221 97 aa11.95□□□□□ -0.5
SRSF1-201ENST00000258962 LYPD5Q6UWN5 251 aa11.95□□□□□ -0.5
SRSF1-201ENST00000258962 TSPEAR-AS2P59090 65 aa11.94□□□□□ -0.5
SRSF1-201ENST00000258962 SCGB1D4Q6XE38 83 aa11.94□□□□□ -0.5
SRSF1-201ENST00000258962 Q8N3U1 123 aa11.93□□□□□ -0.5
SRSF1-201ENST00000258962 LINC00469Q8N7U9 141 aa11.93□□□□□ -0.5
SRSF1-201ENST00000258962 CDKN2A-AS1Q9UH64 79 aa11.92□□□□□ -0.5
SRSF1-201ENST00000258962 DYNC2H1Q8NCM8 4307 aaKnown RBP11.92□□□□□ -0.5
SRSF1-201ENST00000258962 HIST1H4GQ99525 98 aa11.91□□□□□ -0.5
SRSF1-201ENST00000258962 IGHV3-64A0A075B6Q5 118 aa11.91□□□□□ -0.5
SRSF1-201ENST00000258962 IGHV1-58A0A0C4DH39 117 aa11.91□□□□□ -0.5
SRSF1-201ENST00000258962 TM2D2Q9BX73 214 aa11.91□□□□□ -0.5
SRSF1-201ENST00000258962 TRAV8-3A0A0A6YYJ7 113 aa11.9□□□□□ -0.5
SRSF1-201ENST00000258962 IGKV3OR2-268A0A0C4DH90 116 aa11.9□□□□□ -0.5
SRSF1-201ENST00000258962 PTTG1IPP53801 180 aa11.9□□□□□ -0.5
SRSF1-201ENST00000258962 CEND1Q8N111 149 aa11.9□□□□□ -0.5
SRSF1-201ENST00000258962 C15orf53Q8NAA6 179 aa11.9□□□□□ -0.5
SRSF1-201ENST00000258962 SPINK8P0C7L1 97 aa11.89□□□□□ -0.51
SRSF1-201ENST00000258962 GCSHP23434 173 aa11.89□□□□□ -0.51
SRSF1-201ENST00000258962 LINC00959A0A1B0GUT2 108 aa11.88□□□□□ -0.51
SRSF1-201ENST00000258962 IGHV3-30-3P0DP02 117 aa11.88□□□□□ -0.51
SRSF1-201ENST00000258962 PLECQ15149 4684 aaKnown RBP11.88□□□□□ -0.51
SRSF1-201ENST00000258962 TMEM238LA0A1B0GVL6 79 aa11.87□□□□□ -0.51
SRSF1-201ENST00000258962 A6NJY4 79 aa11.87□□□□□ -0.51
SRSF1-201ENST00000258962 CCL25O15444 150 aa11.87□□□□□ -0.51
SRSF1-201ENST00000258962 SRSF9Q13242 221 aaKnown RBP eCLIP11.87□□□□□ -0.511e-9■□□□□ 11.3
SRSF1-201ENST00000258962 ESRGQ1W209 222 aa11.87□□□□□ -0.51
SRSF1-201ENST00000258962 CLPSL2Q6UWE3 100 aa11.87□□□□□ -0.51
SRSF1-201ENST00000258962 SPANXB1Q9NS25 103 aaPredicted RBP11.87□□□□□ -0.51
SRSF1-201ENST00000258962 SMIM13P0DJ93 91 aa11.86□□□□□ -0.51
SRSF1-201ENST00000258962 COX11Q9Y6N1 276 aa11.86□□□□□ -0.51
SRSF1-201ENST00000258962 WFDC10BQ8IUB3 73 aa11.86□□□□□ -0.51
SRSF1-201ENST00000258962 UBE2DNLQ8IWF7 75 aa11.86□□□□□ -0.51
SRSF1-201ENST00000258962 LINC00269Q8N2A0 174 aa11.86□□□□□ -0.51
SRSF1-201ENST00000258962 LYSTQ99698 3801 aa11.86□□□□□ -0.51
SRSF1-201ENST00000258962 SMIM1B2RUZ4 78 aa11.85□□□□□ -0.51
SRSF1-201ENST00000258962 ANGP03950 147 aaKnown RBP11.85□□□□□ -0.51
SRSF1-201ENST00000258962 ALMS1Q8TCU4 4167 aa11.84□□□□□ -0.51
SRSF1-201ENST00000258962 IGHV3OR16-9A0A0B4J2B5 98 aa11.84□□□□□ -0.51
SRSF1-201ENST00000258962 IGLV5-39A0A0G2JS06 123 aa11.84□□□□□ -0.51
SRSF1-201ENST00000258962 TMEM238C9JI98 176 aa11.84□□□□□ -0.51
SRSF1-201ENST00000258962 SACSQ9NZJ4 4579 aa11.83□□□□□ -0.52
SRSF1-201ENST00000258962 TAX1BP3O14907 124 aa11.83□□□□□ -0.52
SRSF1-201ENST00000258962 RYR3Q15413 4870 aa11.83□□□□□ -0.52
SRSF1-201ENST00000258962 REG3AQ06141 175 aa11.82□□□□□ -0.52
SRSF1-201ENST00000258962 SS18Q15532 418 aa11.82□□□□□ -0.52
SRSF1-201ENST00000258962 NDUFA12Q9UI09 145 aa11.82□□□□□ -0.52
SRSF1-201ENST00000258962 RYR2Q92736 4967 aa11.82□□□□□ -0.52
SRSF1-201ENST00000258962 IGHV3-30P01768 117 aa11.81□□□□□ -0.52
SRSF1-201ENST00000258962 IGHV3-33P01772 117 aa11.81□□□□□ -0.52
SRSF1-201ENST00000258962 IGHV3-30-5P0DP03 117 aa11.81□□□□□ -0.52
SRSF1-201ENST00000258962 FXYD2P54710 66 aa11.81□□□□□ -0.52
SRSF1-201ENST00000258962 Q6ZVH6 145 aa11.81□□□□□ -0.52
SRSF1-201ENST00000258962 PRR34Q9NV39 138 aa11.81□□□□□ -0.52
SRSF1-201ENST00000258962 XCL1P47992 114 aa11.8□□□□□ -0.52
SRSF1-201ENST00000258962 CCL18P55774 89 aa11.8□□□□□ -0.52
SRSF1-201ENST00000258962 C10orf126Q8N4M7 172 aa11.8□□□□□ -0.52
SRSF1-201ENST00000258962 KLK12Q9UKR0 248 aa11.8□□□□□ -0.52
SRSF1-201ENST00000258962 DNAH1Q9P2D7 4330 aa11.79□□□□□ -0.52
SRSF1-201ENST00000258962 A0A087WZ39 114 aa11.79□□□□□ -0.52
SRSF1-201ENST00000258962 C9orf118A6NHY6 69 aa11.79□□□□□ -0.52
SRSF1-201ENST00000258962 CIRBPQ14011 172 aaKnown RBP11.79□□□□□ -0.52
SRSF1-201ENST00000258962 A0A0J9YXY3 114 aa11.78□□□□□ -0.52
SRSF1-201ENST00000258962 NDUFA1O15239 70 aa11.78□□□□□ -0.52
SRSF1-201ENST00000258962 TIMM17BO60830 172 aa11.78□□□□□ -0.52
SRSF1-201ENST00000258962 ENHOQ6UWT2 76 aa11.78□□□□□ -0.52
SRSF1-201ENST00000258962 C5orf38Q86SI9 138 aa11.78□□□□□ -0.52
SRSF1-201ENST00000258962 CHCHD10Q8WYQ3 142 aaPredicted RBP11.78□□□□□ -0.52
SRSF1-201ENST00000258962 NHP2Q9NX24 153 aaKnown RBP11.78□□□□□ -0.52
SRSF1-201ENST00000258962 HERV-K104P63124 156 aa11.77□□□□□ -0.52
SRSF1-201ENST00000258962 VAMP3Q15836 100 aa11.77□□□□□ -0.52
SRSF1-201ENST00000258962 LINC00588Q9Y4M8 146 aa11.77□□□□□ -0.52
SRSF1-201ENST00000258962 HYDINQ4G0P3 5121 aa11.76□□□□□ -0.53
SRSF1-201ENST00000258962 IGLV10-54A0A075B6I4 117 aa11.76□□□□□ -0.53
SRSF1-201ENST00000258962 RPL24P83731 157 aaKnown RBP11.76□□□□□ -0.53
SRSF1-201ENST00000258962 SFTA2Q6UW10 78 aa11.76□□□□□ -0.53
SRSF1-201ENST00000258962 LINC01561Q8N1V8 128 aa11.76□□□□□ -0.53
SRSF1-201ENST00000258962 COPS9Q8WXC6 57 aa11.76□□□□□ -0.53
SRSF1-201ENST00000258962 LINC01556Q5JQF7 62 aa11.76□□□□□ -0.53
SRSF1-201ENST00000258962 CD164L2Q6UWJ8 174 aa11.76□□□□□ -0.53
SRSF1-201ENST00000258962 A0A1B0GWB2 263 aa11.75□□□□□ -0.53
SRSF1-201ENST00000258962 FOXI1Q12951 378 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms