RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 LINC00526Q96FQ7 95 aa10.62□□□□□ -0.71
CAB39-201ENST00000258418 C16orf74Q96GX8 76 aa10.62□□□□□ -0.71
CAB39-201ENST00000258418 CHCHD7Q9BUK0 85 aa10.62□□□□□ -0.71
CAB39-201ENST00000258418 DAZ2Q13117 558 aaKnown RBP10.62□□□□□ -0.71
CAB39-201ENST00000258418 DAZ4Q86SG3 579 aaKnown RBP10.62□□□□□ -0.71
CAB39-201ENST00000258418 C15orf53Q8NAA6 179 aa10.62□□□□□ -0.71
CAB39-201ENST00000258418 DAZ3Q9NR90 486 aaKnown RBP10.62□□□□□ -0.71
CAB39-201ENST00000258418 BSNQ9UPA5 3926 aa10.61□□□□□ -0.71
CAB39-201ENST00000258418 ATP5G1P05496 136 aa10.61□□□□□ -0.71
CAB39-201ENST00000258418 TINCRA0A1B0GVN0 87 aa10.61□□□□□ -0.71
CAB39-201ENST00000258418 MIAQ16674 131 aa10.61□□□□□ -0.71
CAB39-201ENST00000258418 SND1-IT1Q9HBX3 110 aa10.61□□□□□ -0.71
CAB39-201ENST00000258418 CMC4P56277 68 aaPredicted RBP10.61□□□□□ -0.71
CAB39-201ENST00000258418 SMIM20Q8N5G0 67 aa10.61□□□□□ -0.71
CAB39-201ENST00000258418 TMEM86BQ8N661 226 aa10.6□□□□□ -0.71
CAB39-201ENST00000258418 APCP25054 2843 aa10.6□□□□□ -0.71
CAB39-201ENST00000258418 NBEAL1Q6ZS30 2694 aa10.6□□□□□ -0.71
CAB39-201ENST00000258418 LINC01546A6NGU7 62 aa10.6□□□□□ -0.71
CAB39-201ENST00000258418 SMCPP49901 116 aaPredicted RBP10.6□□□□□ -0.71
CAB39-201ENST00000258418 RPL32P62910 135 aaKnown RBP10.6□□□□□ -0.71
CAB39-201ENST00000258418 RNF152Q8N8N0 203 aa10.6□□□□□ -0.71
CAB39-201ENST00000258418 S100A7L2Q5SY68 101 aa10.59□□□□□ -0.71
CAB39-201ENST00000258418 TRAV4A0A0B4J268 109 aa10.59□□□□□ -0.71
CAB39-201ENST00000258418 FAM222AQ5U5X8 452 aa10.59□□□□□ -0.71
CAB39-201ENST00000258418 RNF183Q96D59 192 aa10.59□□□□□ -0.71
CAB39-201ENST00000258418 LINC00242Q5T6M2 205 aa10.58□□□□□ -0.72
CAB39-201ENST00000258418 BRI3O95415 125 aa10.58□□□□□ -0.72
CAB39-201ENST00000258418 COX7B2Q8TF08 81 aa10.58□□□□□ -0.72
CAB39-201ENST00000258418 CSMD2Q7Z408 3487 aa10.58□□□□□ -0.72
CAB39-201ENST00000258418 TRAV25A0A0B4J276 109 aa10.58□□□□□ -0.72
CAB39-201ENST00000258418 MRPS36P82909 103 aaKnown RBP10.58□□□□□ -0.72
CAB39-201ENST00000258418 BAALC-AS2P0C853 105 aa10.57□□□□□ -0.72
CAB39-201ENST00000258418 LINC00308Q8TCZ7 52 aa10.57□□□□□ -0.72
CAB39-201ENST00000258418 LRRC75A-AS1Q8N1F1 130 aa10.56□□□□□ -0.72
CAB39-201ENST00000258418 PYGO1Q9Y3Y4 419 aa10.56□□□□□ -0.72
CAB39-201ENST00000258418 IGLV4-60A0A075B6I1 120 aa10.56□□□□□ -0.72
CAB39-201ENST00000258418 KLK9Q2XQG4 91 aa10.56□□□□□ -0.72
CAB39-201ENST00000258418 C11orf72Q8NBR9 251 aa10.55□□□□□ -0.72
CAB39-201ENST00000258418 TRBV10-1A0A0K0K1A3 114 aa10.55□□□□□ -0.72
CAB39-201ENST00000258418 A0A0B4J2C4 111 aa10.54□□□□□ -0.72
CAB39-201ENST00000258418 HERV-K104P63124 156 aa10.54□□□□□ -0.72
CAB39-201ENST00000258418 LINC00269Q8N2A0 174 aa10.54□□□□□ -0.72
CAB39-201ENST00000258418 SLPIP03973 132 aa10.54□□□□□ -0.72
CAB39-201ENST00000258418 SCGB1A1P11684 91 aa10.54□□□□□ -0.72
CAB39-201ENST00000258418 TRBV10-2A0A0K0K1G8 114 aa10.53□□□□□ -0.72
CAB39-201ENST00000258418 FAM110AQ9BQ89 295 aa10.53□□□□□ -0.72
CAB39-201ENST00000258418 KLK12Q9UKR0 248 aa10.53□□□□□ -0.72
CAB39-201ENST00000258418 EIF4EBP3O60516 100 aaPredicted RBP10.53□□□□□ -0.72
CAB39-201ENST00000258418 LY6G6DO95868 133 aa10.53□□□□□ -0.72
CAB39-201ENST00000258418 PRO0461Q9UI25 63 aa10.53□□□□□ -0.72
CAB39-201ENST00000258418 AMELXQ99217 191 aa10.53□□□□□ -0.72
CAB39-201ENST00000258418 A0A096LNT2 108 aa10.52□□□□□ -0.72
CAB39-201ENST00000258418 IFITM1P13164 125 aa10.52□□□□□ -0.72
CAB39-201ENST00000258418 NTM-AS1Q6ZSK4 140 aa10.52□□□□□ -0.73
CAB39-201ENST00000258418 NIPBLQ6KC79 2804 aaeCLIP10.52□□□□□ -0.732e-7■□□□□ 8.6
CAB39-201ENST00000258418 LECT2O14960 151 aa10.52□□□□□ -0.73
CAB39-201ENST00000258418 DEFB121Q5J5C9 76 aa10.51□□□□□ -0.73
CAB39-201ENST00000258418 TRBV6-8A0A0A6YYG3 113 aa10.51□□□□□ -0.73
CAB39-201ENST00000258418 UBE2D3P61077 147 aa10.51□□□□□ -0.73
CAB39-201ENST00000258418 UBE2D2P62837 147 aa10.51□□□□□ -0.73
CAB39-201ENST00000258418 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.51□□□□□ -0.73
CAB39-201ENST00000258418 MRAPQ8TCY5 172 aa10.51□□□□□ -0.73
CAB39-201ENST00000258418 CDC42SE2Q9NRR3 84 aa10.51□□□□□ -0.73
CAB39-201ENST00000258418 SVIPQ8NHG7 77 aa10.51□□□□□ -0.73
CAB39-201ENST00000258418 EDA2RQ9HAV5 297 aa10.51□□□□□ -0.73
CAB39-201ENST00000258418 HIST1H4AP62805 103 aaKnown RBP10.5□□□□□ -0.73
CAB39-201ENST00000258418 SPATA25Q9BR10 227 aa10.5□□□□□ -0.73
CAB39-201ENST00000258418 STAB1Q9NY15 2570 aa10.5□□□□□ -0.73
CAB39-201ENST00000258418 SMIM1B2RUZ4 78 aa10.5□□□□□ -0.73
CAB39-201ENST00000258418 NDUFA1O15239 70 aa10.49□□□□□ -0.73
CAB39-201ENST00000258418 NCR3O14931 201 aa10.49□□□□□ -0.73
CAB39-201ENST00000258418 LAMTOR3Q9UHA4 124 aa10.49□□□□□ -0.73
CAB39-201ENST00000258418 PRR3P79522 188 aaKnown RBP10.49□□□□□ -0.73
CAB39-201ENST00000258418 CDIP1Q9H305 208 aa10.49□□□□□ -0.73
CAB39-201ENST00000258418 PRO0255Q9UI72 69 aa10.49□□□□□ -0.73
CAB39-201ENST00000258418 TRAV13-2A0A0B4J235 113 aa10.48□□□□□ -0.73
CAB39-201ENST00000258418 TIRAPP58753 221 aa10.48□□□□□ -0.73
CAB39-201ENST00000258418 COL6A5A8TX70 2615 aa10.46□□□□□ -0.73
CAB39-201ENST00000258418 IGLV1-51P01701 117 aa10.46□□□□□ -0.73
CAB39-201ENST00000258418 FHL3Q13643 280 aa10.46□□□□□ -0.73
CAB39-201ENST00000258418 IGKV3D-7A0A0C4DH55 119 aa10.46□□□□□ -0.73
CAB39-201ENST00000258418 APOC4P55056 127 aa10.46□□□□□ -0.73
CAB39-201ENST00000258418 C9orf116Q5BN46 136 aaPredicted RBP10.46□□□□□ -0.73
CAB39-201ENST00000258418 H7C423 109 aa10.46□□□□□ -0.74
CAB39-201ENST00000258418 COX7A2LO14548 114 aa10.46□□□□□ -0.74
CAB39-201ENST00000258418 HILS1P60008 231 aa10.45□□□□□ -0.74
CAB39-201ENST00000258418 TRBV30A0A0K0K1B3 111 aa10.45□□□□□ -0.74
CAB39-201ENST00000258418 BEAN1Q3B7T3 259 aa10.45□□□□□ -0.74
CAB39-201ENST00000258418 C9orf66Q5T8R8 295 aa10.45□□□□□ -0.74
CAB39-201ENST00000258418 Q8N2B8 174 aa10.45□□□□□ -0.74
CAB39-201ENST00000258418 C14orf132Q9NPU4 83 aa10.45□□□□□ -0.74
CAB39-201ENST00000258418 FSHBP01225 129 aa10.45□□□□□ -0.74
CAB39-201ENST00000258418 TRBV6-4A0A1B0GX49 114 aa10.44□□□□□ -0.74
CAB39-201ENST00000258418 PRB2P02812 416 aaPredicted RBP10.44□□□□□ -0.74
CAB39-201ENST00000258418 Q8N3U1 123 aa10.44□□□□□ -0.74
CAB39-201ENST00000258418 HIGD2BQ4VC39 106 aa10.44□□□□□ -0.74
CAB39-201ENST00000258418 OXLD1Q5BKU9 147 aa10.44□□□□□ -0.74
CAB39-201ENST00000258418 XAGE1AQ9HD64 81 aa10.43□□□□□ -0.74
CAB39-201ENST00000258418 ZNF561-AS1K7EIQ3 104 aa10.43□□□□□ -0.74
CAB39-201ENST00000258418 SHISA2Q6UWI4 295 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms