RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 NDUFC2-KCTD14E9PQ53 114 aa14.01□□□□□ -0.17
PPFIA1-201ENST00000253925 SLPIP03973 132 aa14.01□□□□□ -0.17
PPFIA1-201ENST00000253925 CHCHD10Q8WYQ3 142 aaPredicted RBP14□□□□□ -0.17
PPFIA1-201ENST00000253925 CHD8Q9HCK8 2581 aa13.99□□□□□ -0.17
PPFIA1-201ENST00000253925 SPTBN4Q9H254 2564 aa13.99□□□□□ -0.17
PPFIA1-201ENST00000253925 LINC01006Q8NI28 216 aa13.99□□□□□ -0.17
PPFIA1-201ENST00000253925 PDE6GP18545 87 aa13.98□□□□□ -0.17
PPFIA1-201ENST00000253925 ODF3L2Q3SX64 289 aa13.98□□□□□ -0.17
PPFIA1-201ENST00000253925 KIF25-AS1Q9Y6Z4 181 aa13.98□□□□□ -0.17
PPFIA1-201ENST00000253925 C5orf42Q9H799 3197 aa13.98□□□□□ -0.17
PPFIA1-201ENST00000253925 ETDCA0A1B0GVM5 59 aa13.98□□□□□ -0.17
PPFIA1-201ENST00000253925 AMELXQ99217 191 aa13.98□□□□□ -0.17
PPFIA1-201ENST00000253925 CDC42SE2Q9NRR3 84 aa13.98□□□□□ -0.17
PPFIA1-201ENST00000253925 ZNF843Q8N446 348 aa13.98□□□□□ -0.17
PPFIA1-201ENST00000253925 LINC00242Q5T6M2 205 aa13.97□□□□□ -0.17
PPFIA1-201ENST00000253925 SHISA2Q6UWI4 295 aa13.97□□□□□ -0.17
PPFIA1-201ENST00000253925 ATP5EP2Q5VTU8 51 aa13.97□□□□□ -0.17
PPFIA1-201ENST00000253925 PTPRBP23467 1997 aa13.97□□□□□ -0.17
PPFIA1-201ENST00000253925 CHCHD7Q9BUK0 85 aa13.96□□□□□ -0.17
PPFIA1-201ENST00000253925 ABCA12Q86UK0 2595 aa13.96□□□□□ -0.17
PPFIA1-201ENST00000253925 SETD2Q9BYW2 2564 aaPredicted RBP13.96□□□□□ -0.17
PPFIA1-201ENST00000253925 MP68P56378 58 aa13.96□□□□□ -0.17
PPFIA1-201ENST00000253925 FAM240AA0A1B0GVK7 77 aa13.96□□□□□ -0.18
PPFIA1-201ENST00000253925 CHD9Q3L8U1 2897 aa13.95□□□□□ -0.18
PPFIA1-201ENST00000253925 CDIP1Q9H305 208 aa13.95□□□□□ -0.18
PPFIA1-201ENST00000253925 AGRNO00468 2067 aa13.94□□□□□ -0.18
PPFIA1-201ENST00000253925 LOC100131303A0A0U1RQF7 123 aa13.94□□□□□ -0.18
PPFIA1-201ENST00000253925 FAM19A5Q7Z5A7 132 aaPredicted RBP13.94□□□□□ -0.18
PPFIA1-201ENST00000253925 WFDC10AQ9H1F0 79 aa13.94□□□□□ -0.18
PPFIA1-201ENST00000253925 CCL18P55774 89 aa13.93□□□□□ -0.18
PPFIA1-201ENST00000253925 SNURFQ9Y675 71 aa13.93□□□□□ -0.18
PPFIA1-201ENST00000253925 SPTSSBQ8NFR3 76 aa13.93□□□□□ -0.18
PPFIA1-201ENST00000253925 SCXQ7RTU7 201 aa13.93□□□□□ -0.18
PPFIA1-201ENST00000253925 COX7BP24311 80 aa13.92□□□□□ -0.18
PPFIA1-201ENST00000253925 HIGD2BQ4VC39 106 aa13.92□□□□□ -0.18
PPFIA1-201ENST00000253925 LINC00526Q96FQ7 95 aa13.92□□□□□ -0.18
PPFIA1-201ENST00000253925 UBE2BP63146 152 aa13.92□□□□□ -0.18
PPFIA1-201ENST00000253925 MRPL55Q7Z7F7 128 aaKnown RBP13.91□□□□□ -0.18
PPFIA1-201ENST00000253925 LINC00959A0A1B0GUT2 108 aa13.91□□□□□ -0.18
PPFIA1-201ENST00000253925 SMIM1B2RUZ4 78 aa13.91□□□□□ -0.18
PPFIA1-201ENST00000253925 BBC3Q96PG8 261 aaPredicted RBP13.91□□□□□ -0.18
PPFIA1-201ENST00000253925 LOC107984640A0A0U1RRK4 108 aa13.9□□□□□ -0.18
PPFIA1-201ENST00000253925 BEAN1Q3B7T3 259 aa13.9□□□□□ -0.18
PPFIA1-201ENST00000253925 KLK5Q9Y337 293 aaPredicted RBP13.9□□□□□ -0.18
PPFIA1-201ENST00000253925 FAM19A4Q96LR4 140 aa13.9□□□□□ -0.18
PPFIA1-201ENST00000253925 MIFP14174 115 aa13.89□□□□□ -0.19
PPFIA1-201ENST00000253925 PPDPFQ9H3Y8 114 aa13.89□□□□□ -0.19
PPFIA1-201ENST00000253925 CD164L2Q6UWJ8 174 aa13.89□□□□□ -0.19
PPFIA1-201ENST00000253925 LINC00315P59091 139 aa13.89□□□□□ -0.19
PPFIA1-201ENST00000253925 CSDC2Q9Y534 153 aaKnown RBP13.89□□□□□ -0.19
PPFIA1-201ENST00000253925 C1orf195Q5TG92 126 aa13.88□□□□□ -0.19
PPFIA1-201ENST00000253925 LINC00482Q8N8I6 264 aa13.88□□□□□ -0.19
PPFIA1-201ENST00000253925 C1orf158Q8N1D5 194 aa13.88□□□□□ -0.19
PPFIA1-201ENST00000253925 ADAMTSL4-AS1Q5T5F5 129 aa13.87□□□□□ -0.19
PPFIA1-201ENST00000253925 NDUFS5O43920 106 aa13.87□□□□□ -0.19
PPFIA1-201ENST00000253925 SMIM11BQ8TCY0 68 aa13.87□□□□□ -0.19
PPFIA1-201ENST00000253925 C6orf99Q4VX62 202 aa13.86□□□□□ -0.19
PPFIA1-201ENST00000253925 HILS1P60008 231 aa13.86□□□□□ -0.19
PPFIA1-201ENST00000253925 KLK9Q2XQG4 91 aa13.85□□□□□ -0.19
PPFIA1-201ENST00000253925 BPY2O14599 106 aa13.84□□□□□ -0.19
PPFIA1-201ENST00000253925 KRTAP10-9P60411 292 aa13.84□□□□□ -0.19
PPFIA1-201ENST00000253925 COX6A2Q02221 97 aa13.84□□□□□ -0.19
PPFIA1-201ENST00000253925 Q6ZSN1 163 aa13.84□□□□□ -0.19
PPFIA1-201ENST00000253925 Q8IZM0 81 aa13.83□□□□□ -0.2
PPFIA1-201ENST00000253925 Q6JHZ5 121 aa13.83□□□□□ -0.2
PPFIA1-201ENST00000253925 A0A087WVE0 104 aa13.82□□□□□ -0.2
PPFIA1-201ENST00000253925 IGLV1-51P01701 117 aa13.81□□□□□ -0.2
PPFIA1-201ENST00000253925 KIR2DL5BQ8NHK3 375 aa13.81□□□□□ -0.2
PPFIA1-201ENST00000253925 LRRK2Q5S007 2527 aa13.8□□□□□ -0.2
PPFIA1-201ENST00000253925 NDUFC1O43677 76 aa13.8□□□□□ -0.2
PPFIA1-201ENST00000253925 FN1P02751 2386 aaKnown RBP13.8□□□□□ -0.2
PPFIA1-201ENST00000253925 COL27A1Q8IZC6 1860 aaPredicted RBP13.8□□□□□ -0.2
PPFIA1-201ENST00000253925 ATP5EP56381 51 aaPredicted RBP13.79□□□□□ -0.2
PPFIA1-201ENST00000253925 SMIM26A0A096LP01 95 aa13.79□□□□□ -0.2
PPFIA1-201ENST00000253925 RPL28P46779 137 aaKnown RBP13.79□□□□□ -0.2
PPFIA1-201ENST00000253925 COX17Q14061 63 aa13.79□□□□□ -0.2
PPFIA1-201ENST00000253925 XAGE1AQ9HD64 81 aa13.79□□□□□ -0.2
PPFIA1-201ENST00000253925 A0A087WZ39 114 aa13.79□□□□□ -0.2
PPFIA1-201ENST00000253925 INAFM1C9JVW0 142 aa13.78□□□□□ -0.2
PPFIA1-201ENST00000253925 LELP1Q5T871 98 aa13.78□□□□□ -0.2
PPFIA1-201ENST00000253925 C11orf45Q8TAV5 145 aa13.78□□□□□ -0.2
PPFIA1-201ENST00000253925 MUC7Q8TAX7 377 aa13.77□□□□□ -0.21
PPFIA1-201ENST00000253925 RANBP2P49792 3224 aaKnown RBP13.75□□□□□ -0.21
PPFIA1-201ENST00000253925 IGLV4-60A0A075B6I1 120 aa13.75□□□□□ -0.21
PPFIA1-201ENST00000253925 SERP1Q9Y6X1 66 aa13.75□□□□□ -0.21
PPFIA1-201ENST00000253925 SMCPP49901 116 aaPredicted RBP13.74□□□□□ -0.21
PPFIA1-201ENST00000253925 TRANK1O15050 2925 aa13.74□□□□□ -0.21
PPFIA1-201ENST00000253925 FHL2Q14192 279 aa13.74□□□□□ -0.21
PPFIA1-201ENST00000253925 C11orf72Q8NBR9 251 aa13.74□□□□□ -0.21
PPFIA1-201ENST00000253925 JMJD1CQ15652 2540 aa13.74□□□□□ -0.21
PPFIA1-201ENST00000253925 ZFYVE26Q68DK2 2539 aa13.73□□□□□ -0.21
PPFIA1-201ENST00000253925 DEFB131BA0A096LNP1 70 aa13.72□□□□□ -0.21
PPFIA1-201ENST00000253925 LY6G6DO95868 133 aa13.72□□□□□ -0.21
PPFIA1-201ENST00000253925 Q6ZQY7 126 aa13.72□□□□□ -0.21
PPFIA1-201ENST00000253925 A0A0C4DFX4 3053 aa13.71□□□□□ -0.21
PPFIA1-201ENST00000253925 DOPEY1Q5JWR5 2465 aa13.71□□□□□ -0.21
PPFIA1-201ENST00000253925 CHKB-CPT1BH3BT56 60 aa13.71□□□□□ -0.21
PPFIA1-201ENST00000253925 PRO0461Q9UI25 63 aa13.71□□□□□ -0.21
PPFIA1-201ENST00000253925 PKD1L2Q7Z442 2459 aa13.71□□□□□ -0.21
PPFIA1-201ENST00000253925 Q8N2B8 174 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 209.9 ms