RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 TPRP12270 2363 aaKnown RBP3.04□□□□□ -1.92
UBE4A-201ENST00000252108 K7EQD1 137 aa3.04□□□□□ -1.92
UBE4A-201ENST00000252108 PAX4O43316 350 aa3.04□□□□□ -1.92
UBE4A-201ENST00000252108 COX7CP15954 63 aa3.04□□□□□ -1.92
UBE4A-201ENST00000252108 Q6JHZ5 121 aa3.04□□□□□ -1.92
UBE4A-201ENST00000252108 LINC00526Q96FQ7 95 aa3.04□□□□□ -1.92
UBE4A-201ENST00000252108 VPREB3Q9UKI3 123 aa3.04□□□□□ -1.92
UBE4A-201ENST00000252108 PCNX1Q96RV3 2341 aa3.04□□□□□ -1.92
UBE4A-201ENST00000252108 CCL24O00175 119 aa3.04□□□□□ -1.92
UBE4A-201ENST00000252108 NDUFA7O95182 113 aa3.04□□□□□ -1.92
UBE4A-201ENST00000252108 TRAV12-2A0A075B6T6 113 aa3.04□□□□□ -1.92
UBE4A-201ENST00000252108 NDUFC2-KCTD14E9PQ53 114 aa3.04□□□□□ -1.92
UBE4A-201ENST00000252108 TSPEAR-AS2P59090 65 aa3.04□□□□□ -1.92
UBE4A-201ENST00000252108 XCL2Q9UBD3 114 aa3.04□□□□□ -1.92
UBE4A-201ENST00000252108 IBA57-AS1B1ANH7 110 aa3.04□□□□□ -1.92
UBE4A-201ENST00000252108 AVPP01185 164 aa3.04□□□□□ -1.92
UBE4A-201ENST00000252108 VPREB1P12018 145 aa3.04□□□□□ -1.92
UBE4A-201ENST00000252108 COX7B2Q8TF08 81 aa3.04□□□□□ -1.92
UBE4A-201ENST00000252108 SPTBN4Q9H254 2564 aa3.03□□□□□ -1.92
UBE4A-201ENST00000252108 IGHV3-73A0A0B4J1V6 119 aa3.03□□□□□ -1.92
UBE4A-201ENST00000252108 TRAV13-1A0A0B4J241 112 aa3.03□□□□□ -1.92
UBE4A-201ENST00000252108 NPC2P61916 151 aa3.03□□□□□ -1.92
UBE4A-201ENST00000252108 Q8N2B8 174 aa3.03□□□□□ -1.92
UBE4A-201ENST00000252108 CLEC2BQ92478 149 aa3.03□□□□□ -1.92
UBE4A-201ENST00000252108 SND1-IT1Q9HBX3 110 aa3.03□□□□□ -1.92
UBE4A-201ENST00000252108 TRRAPQ9Y4A5 3859 aa3.03□□□□□ -1.92
UBE4A-201ENST00000252108 IGLV5-45A0A087WSX0 123 aa3.03□□□□□ -1.92
UBE4A-201ENST00000252108 BCE1O60756 84 aa3.03□□□□□ -1.92
UBE4A-201ENST00000252108 NDUFC2O95298 119 aa3.03□□□□□ -1.92
UBE4A-201ENST00000252108 C6orf226Q5I0X4 101 aa3.03□□□□□ -1.92
UBE4A-201ENST00000252108 NRGNQ92686 78 aa3.03□□□□□ -1.92
UBE4A-201ENST00000252108 C16orf74Q96GX8 76 aa3.03□□□□□ -1.92
UBE4A-201ENST00000252108 RIF1Q5UIP0 2472 aaKnown RBP3.03□□□□□ -1.92
UBE4A-201ENST00000252108 RPS28P62857 69 aaKnown RBP3.03□□□□□ -1.92
UBE4A-201ENST00000252108 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.03□□□□□ -1.92
UBE4A-201ENST00000252108 IGKV2-29A2NJV5 120 aaPredicted RBP3.03□□□□□ -1.92
UBE4A-201ENST00000252108 TMEM256-PLSCR3K7ERE1 68 aa3.03□□□□□ -1.92
UBE4A-201ENST00000252108 PSMB8P28062 276 aa3.03□□□□□ -1.92
UBE4A-201ENST00000252108 RPL28P46779 137 aaKnown RBP3.03□□□□□ -1.92
UBE4A-201ENST00000252108 CHKB-CPT1BH3BT56 60 aa3.02□□□□□ -1.93
UBE4A-201ENST00000252108 SETXQ7Z333 2677 aaKnown RBP3.02□□□□□ -1.93
UBE4A-201ENST00000252108 ROS1P08922 2347 aa3.02□□□□□ -1.93
UBE4A-201ENST00000252108 WNK2Q9Y3S1 2297 aa3.02□□□□□ -1.93
UBE4A-201ENST00000252108 TRBV12-3P01733 135 aa3.02□□□□□ -1.93
UBE4A-201ENST00000252108 BEAN1Q3B7T3 259 aa3.02□□□□□ -1.93
UBE4A-201ENST00000252108 SERP2Q8N6R1 65 aa3.02□□□□□ -1.93
UBE4A-201ENST00000252108 CENPEQ02224 2701 aa3.02□□□□□ -1.93
UBE4A-201ENST00000252108 CCDC179H3BU77 68 aa3.02□□□□□ -1.93
UBE4A-201ENST00000252108 ATP5EP56381 51 aaPredicted RBP3.02□□□□□ -1.93
UBE4A-201ENST00000252108 LINC01561Q8N1V8 128 aa3.02□□□□□ -1.93
UBE4A-201ENST00000252108 CHD8Q9HCK8 2581 aa3.02□□□□□ -1.93
UBE4A-201ENST00000252108 AGRNO00468 2067 aa3.02□□□□□ -1.93
UBE4A-201ENST00000252108 PRB2P02812 416 aaPredicted RBP3.02□□□□□ -1.93
UBE4A-201ENST00000252108 RBMY1FQ15415 496 aaKnown RBP3.02□□□□□ -1.93
UBE4A-201ENST00000252108 CDKN2A-AS1Q9UH64 79 aa3.02□□□□□ -1.93
UBE4A-201ENST00000252108 SLURP1P55000 103 aa3.02□□□□□ -1.93
UBE4A-201ENST00000252108 C4orf3Q8WVX3 66 aa3.02□□□□□ -1.93
UBE4A-201ENST00000252108 OPRPNQ99935 248 aaPredicted RBP3.02□□□□□ -1.93
UBE4A-201ENST00000252108 V9GYY9 64 aa3.02□□□□□ -1.93
UBE4A-201ENST00000252108 DYNC2H1Q8NCM8 4307 aaKnown RBP3.01□□□□□ -1.93
UBE4A-201ENST00000252108 IGHV4-61A0A0C4DH41 118 aa3.01□□□□□ -1.93
UBE4A-201ENST00000252108 KNCNA6PVL3 124 aa3.01□□□□□ -1.93
UBE4A-201ENST00000252108 FAM19A3Q7Z5A8 133 aa3.01□□□□□ -1.93
UBE4A-201ENST00000252108 LAMTOR3Q9UHA4 124 aa3.01□□□□□ -1.93
UBE4A-201ENST00000252108 IGLV5-39A0A0G2JS06 123 aa3.01□□□□□ -1.93
UBE4A-201ENST00000252108 B9D2Q9BPU9 175 aa3.01□□□□□ -1.93
UBE4A-201ENST00000252108 SPRY2O43597 315 aa3.01□□□□□ -1.93
UBE4A-201ENST00000252108 ANGP03950 147 aaKnown RBP3.01□□□□□ -1.93
UBE4A-201ENST00000252108 HIST1H4AP62805 103 aaKnown RBP3.01□□□□□ -1.93
UBE4A-201ENST00000252108 RP1L1Q8IWN7 2480 aaPredicted RBP3.01□□□□□ -1.93
UBE4A-201ENST00000252108 TRBV10-3A0A0K0K1G6 114 aa3.01□□□□□ -1.93
UBE4A-201ENST00000252108 EDN2P20800 178 aa3.01□□□□□ -1.93
UBE4A-201ENST00000252108 BLCAPP62952 87 aa3.01□□□□□ -1.93
UBE4A-201ENST00000252108 CHCHD7Q9BUK0 85 aa3.01□□□□□ -1.93
UBE4A-201ENST00000252108 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.01□□□□□ -1.931e-7■■■■■ 32.5
UBE4A-201ENST00000252108 TEX15Q9BXT5 2789 aa3.01□□□□□ -1.93
UBE4A-201ENST00000252108 NDUFC1O43677 76 aa3.01□□□□□ -1.93
UBE4A-201ENST00000252108 IGHV4-38-2P0DP08 117 aa3.01□□□□□ -1.93
UBE4A-201ENST00000252108 SDIM1Q6ZPB5 146 aa3.01□□□□□ -1.93
UBE4A-201ENST00000252108 A0A0U1RRA0 63 aa3□□□□□ -1.93
UBE4A-201ENST00000252108 TRBV6-4A0A1B0GX49 114 aa3□□□□□ -1.93
UBE4A-201ENST00000252108 COX6B2Q6YFQ2 88 aa3□□□□□ -1.93
UBE4A-201ENST00000252108 CRYGAP11844 174 aa3□□□□□ -1.93
UBE4A-201ENST00000252108 SEC61GP60059 68 aa3□□□□□ -1.93
UBE4A-201ENST00000252108 RBM3P98179 157 aaKnown RBP3□□□□□ -1.93
UBE4A-201ENST00000252108 DEFB112Q30KQ8 113 aa3□□□□□ -1.93
UBE4A-201ENST00000252108 SPTBN2O15020 2390 aa3□□□□□ -1.93
UBE4A-201ENST00000252108 EIF4EBP3O60516 100 aaPredicted RBP3□□□□□ -1.93
UBE4A-201ENST00000252108 LINC00694P0DN24 101 aa3□□□□□ -1.93
UBE4A-201ENST00000252108 GYPEP15421 78 aa3□□□□□ -1.93
UBE4A-201ENST00000252108 ZNF625Q96I27 306 aaPredicted RBP3□□□□□ -1.93
UBE4A-201ENST00000252108 MAP6D1Q9H9H5 199 aa3□□□□□ -1.93
UBE4A-201ENST00000252108 IGHV3-38A0A0C4DH36 116 aa3□□□□□ -1.93
UBE4A-201ENST00000252108 MIR7-3HGQ8N6C7 128 aa3□□□□□ -1.93
UBE4A-201ENST00000252108 DSCR8Q96T75 97 aa3□□□□□ -1.93
UBE4A-201ENST00000252108 COX17Q14061 63 aa2.99□□□□□ -1.93
UBE4A-201ENST00000252108 IGHV4-59P01825 116 aa2.99□□□□□ -1.93
UBE4A-201ENST00000252108 RNASE13Q5GAN3 156 aaKnown RBP2.99□□□□□ -1.93
UBE4A-201ENST00000252108 LITAFQ99732 161 aa2.99□□□□□ -1.93
UBE4A-201ENST00000252108 OTOGQ6ZRI0 2925 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms