RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 ESM1Q9NQ30 184 aa11.52□□□□□ -0.57
SIN3B-201ENST00000248054 TRBV6-8A0A0A6YYG3 113 aa11.51□□□□□ -0.57
SIN3B-201ENST00000248054 XIRP2A4UGR9 3374 aa11.51□□□□□ -0.57
SIN3B-201ENST00000248054 C11orf45Q8TAV5 145 aa11.51□□□□□ -0.57
SIN3B-201ENST00000248054 C14orf132Q9NPU4 83 aa11.5□□□□□ -0.57
SIN3B-201ENST00000248054 KLK12Q9UKR0 248 aa11.5□□□□□ -0.57
SIN3B-201ENST00000248054 FAM19A5Q7Z5A7 132 aaPredicted RBP11.49□□□□□ -0.57
SIN3B-201ENST00000248054 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.49□□□□□ -0.57
SIN3B-201ENST00000248054 IL17DQ8TAD2 202 aa11.49□□□□□ -0.57
SIN3B-201ENST00000248054 EDN2P20800 178 aa11.48□□□□□ -0.57
SIN3B-201ENST00000248054 WNK1Q9H4A3 2382 aa11.48□□□□□ -0.57
SIN3B-201ENST00000248054 REG3AQ06141 175 aa11.47□□□□□ -0.57
SIN3B-201ENST00000248054 MUC7Q8TAX7 377 aa11.47□□□□□ -0.57
SIN3B-201ENST00000248054 LINC00482Q8N8I6 264 aa11.47□□□□□ -0.57
SIN3B-201ENST00000248054 KLK5Q9Y337 293 aaPredicted RBP11.47□□□□□ -0.57
SIN3B-201ENST00000248054 PROK1P58294 105 aa11.47□□□□□ -0.57
SIN3B-201ENST00000248054 COX7CP15954 63 aa11.46□□□□□ -0.57
SIN3B-201ENST00000248054 CHD8Q9HCK8 2581 aa11.46□□□□□ -0.57
SIN3B-201ENST00000248054 LST1O00453 97 aa11.46□□□□□ -0.58
SIN3B-201ENST00000248054 FHL3Q13643 280 aa11.46□□□□□ -0.58
SIN3B-201ENST00000248054 SDIM1Q6ZPB5 146 aa11.46□□□□□ -0.58
SIN3B-201ENST00000248054 TRIOO75962 3097 aa11.45□□□□□ -0.58
SIN3B-201ENST00000248054 UPK3BQ9BT76 320 aa11.45□□□□□ -0.58
SIN3B-201ENST00000248054 IGHV4-28A0A0C4DH34 117 aa11.45□□□□□ -0.58
SIN3B-201ENST00000248054 COL27A1Q8IZC6 1860 aaPredicted RBP11.45□□□□□ -0.58
SIN3B-201ENST00000248054 CHCHD10Q8WYQ3 142 aaPredicted RBP11.45□□□□□ -0.58
SIN3B-201ENST00000248054 UBE2D4Q9Y2X8 147 aa11.45□□□□□ -0.58
SIN3B-201ENST00000248054 REV3LO60673 3130 aa11.44□□□□□ -0.58
SIN3B-201ENST00000248054 MYO18BQ8IUG5 2567 aa11.43□□□□□ -0.58
SIN3B-201ENST00000248054 IGIPA6NJ69 53 aa11.43□□□□□ -0.58
SIN3B-201ENST00000248054 NDUFS5O43920 106 aa11.43□□□□□ -0.58
SIN3B-201ENST00000248054 C14orf177Q52M58 125 aa11.43□□□□□ -0.58
SIN3B-201ENST00000248054 LINC00269Q8N2A0 174 aa11.43□□□□□ -0.58
SIN3B-201ENST00000248054 WFDC10AQ9H1F0 79 aa11.43□□□□□ -0.58
SIN3B-201ENST00000248054 BEAN1Q3B7T3 259 aa11.43□□□□□ -0.58
SIN3B-201ENST00000248054 HRCT1Q6UXD1 115 aa11.43□□□□□ -0.58
SIN3B-201ENST00000248054 SMR3AQ99954 134 aa11.42□□□□□ -0.58
SIN3B-201ENST00000248054 FSHBP01225 129 aa11.42□□□□□ -0.58
SIN3B-201ENST00000248054 LINC00526Q96FQ7 95 aa11.42□□□□□ -0.58
SIN3B-201ENST00000248054 DEFB131BA0A096LNP1 70 aa11.41□□□□□ -0.58
SIN3B-201ENST00000248054 BPY2O14599 106 aa11.41□□□□□ -0.58
SIN3B-201ENST00000248054 MYO9AB2RTY4 2548 aa11.41□□□□□ -0.58
SIN3B-201ENST00000248054 FAM240AA0A1B0GVK7 77 aa11.41□□□□□ -0.58
SIN3B-201ENST00000248054 IGLV2-18A0A075B6J9 118 aa11.41□□□□□ -0.58
SIN3B-201ENST00000248054 NHLRC4P0CG21 123 aaPredicted RBP11.4□□□□□ -0.58
SIN3B-201ENST00000248054 UBE2AP49459 152 aa11.4□□□□□ -0.58
SIN3B-201ENST00000248054 DOPEY1Q5JWR5 2465 aa11.4□□□□□ -0.58
SIN3B-201ENST00000248054 C1orf158Q8N1D5 194 aa11.4□□□□□ -0.58
SIN3B-201ENST00000248054 WFDC9Q8NEX5 89 aa11.4□□□□□ -0.58
SIN3B-201ENST00000248054 FAM19A4Q96LR4 140 aa11.39□□□□□ -0.59
SIN3B-201ENST00000248054 TSPEAR-AS2P59090 65 aa11.39□□□□□ -0.59
SIN3B-201ENST00000248054 ATP5EP56381 51 aaPredicted RBP11.38□□□□□ -0.59
SIN3B-201ENST00000248054 LELP1Q5T871 98 aa11.38□□□□□ -0.59
SIN3B-201ENST00000248054 COX17Q14061 63 aa11.38□□□□□ -0.59
SIN3B-201ENST00000248054 TRAV10A0A0B4J240 114 aa11.37□□□□□ -0.59
SIN3B-201ENST00000248054 ZNF462Q96JM2 2506 aa11.37□□□□□ -0.59
SIN3B-201ENST00000248054 CD164L2Q6UWJ8 174 aa11.37□□□□□ -0.59
SIN3B-201ENST00000248054 SONP18583 2426 aaKnown RBP11.37□□□□□ -0.59
SIN3B-201ENST00000248054 TRAV23DV6A0A075B6W5 121 aa11.37□□□□□ -0.59
SIN3B-201ENST00000248054 NDUFC1O43677 76 aa11.37□□□□□ -0.59
SIN3B-201ENST00000248054 EYSQ5T1H1 3165 aa11.37□□□□□ -0.59
SIN3B-201ENST00000248054 USP9XQ93008 2570 aaPredicted RBP11.36□□□□□ -0.59
SIN3B-201ENST00000248054 DNAH14Q0VDD8 3507 aa11.36□□□□□ -0.59
SIN3B-201ENST00000248054 FAM236DA0A1B0GTK5 79 aa11.35□□□□□ -0.59
SIN3B-201ENST00000248054 FAM236CP0DP71 79 aa11.35□□□□□ -0.59
SIN3B-201ENST00000248054 SERP2Q8N6R1 65 aa11.35□□□□□ -0.59
SIN3B-201ENST00000248054 IGHV4-30-4P0DP06 118 aa11.35□□□□□ -0.59
SIN3B-201ENST00000248054 PKD1L2Q7Z442 2459 aa11.35□□□□□ -0.59
SIN3B-201ENST00000248054 IGLV4-69A0A075B6H9 119 aa11.35□□□□□ -0.59
SIN3B-201ENST00000248054 BRK1Q8WUW1 75 aa11.35□□□□□ -0.59
SIN3B-201ENST00000248054 B9D2Q9BPU9 175 aa11.35□□□□□ -0.59
SIN3B-201ENST00000248054 C20orf197Q8N268 126 aa11.35□□□□□ -0.59
SIN3B-201ENST00000248054 LINC01546A6NGU7 62 aa11.34□□□□□ -0.59
SIN3B-201ENST00000248054 CDC42SE2Q9NRR3 84 aa11.34□□□□□ -0.59
SIN3B-201ENST00000248054 SBSPONQ8IVN8 264 aa11.34□□□□□ -0.59
SIN3B-201ENST00000248054 PRM2P04554 102 aa11.34□□□□□ -0.59
SIN3B-201ENST00000248054 SORL1Q92673 2214 aa11.34□□□□□ -0.59
SIN3B-201ENST00000248054 CHCHD7Q9BUK0 85 aa11.33□□□□□ -0.6
SIN3B-201ENST00000248054 USP9YO00507 2555 aaPredicted RBP11.32□□□□□ -0.6
SIN3B-201ENST00000248054 KIF25-AS1Q9Y6Z4 181 aa11.32□□□□□ -0.6
SIN3B-201ENST00000248054 TRBV7-7A0A0K0K1E9 115 aa11.32□□□□□ -0.6
SIN3B-201ENST00000248054 LINC00959A0A1B0GUT2 108 aa11.32□□□□□ -0.6
SIN3B-201ENST00000248054 CHKB-CPT1BH3BT56 60 aa11.32□□□□□ -0.6
SIN3B-201ENST00000248054 C6orf99Q4VX62 202 aa11.31□□□□□ -0.6
SIN3B-201ENST00000248054 Q8IZM0 81 aa11.31□□□□□ -0.6
SIN3B-201ENST00000248054 LOC100131303A0A0U1RQF7 123 aa11.31□□□□□ -0.6
SIN3B-201ENST00000248054 A8MZ25 164 aa11.31□□□□□ -0.6
SIN3B-201ENST00000248054 Q6JHZ5 121 aa11.31□□□□□ -0.6
SIN3B-201ENST00000248054 SPTBN5Q9NRC6 3674 aaKnown RBP11.31□□□□□ -0.6
SIN3B-201ENST00000248054 KPRPQ5T749 579 aaPredicted RBP11.31□□□□□ -0.6
SIN3B-201ENST00000248054 USP17L23D6RBM5 183 aa11.3□□□□□ -0.6
SIN3B-201ENST00000248054 A0A0U1RQV1 116 aa11.3□□□□□ -0.6
SIN3B-201ENST00000248054 ENHOQ6UWT2 76 aa11.3□□□□□ -0.6
SIN3B-201ENST00000248054 AMELXQ99217 191 aa11.3□□□□□ -0.6
SIN3B-201ENST00000248054 M0R378 163 aa11.28□□□□□ -0.6
SIN3B-201ENST00000248054 FHL2Q14192 279 aa11.28□□□□□ -0.6
SIN3B-201ENST00000248054 DHRS4-AS1Q9P1J3 65 aa11.28□□□□□ -0.6
SIN3B-201ENST00000248054 SLPIP03973 132 aa11.27□□□□□ -0.6
SIN3B-201ENST00000248054 SMIM11BQ8TCY0 68 aa11.27□□□□□ -0.6
SIN3B-201ENST00000248054 POM121L12Q8N7R1 296 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms