RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 GAGE7O76087 117 aa15.55■□□□□ 0.08
RNF39-201ENST00000244360 GAGE12FP0CL80 117 aa15.55■□□□□ 0.08
RNF39-201ENST00000244360 GAGE12GP0CL81 117 aa15.55■□□□□ 0.08
RNF39-201ENST00000244360 GAGE12IP0CL82 117 aa15.55■□□□□ 0.08
RNF39-201ENST00000244360 GAGE4Q13068 117 aa15.55■□□□□ 0.08
RNF39-201ENST00000244360 GAGE5Q13069 117 aa15.55■□□□□ 0.08
RNF39-201ENST00000244360 IGLV5-39A0A0G2JS06 123 aa15.55■□□□□ 0.08
RNF39-201ENST00000244360 TRGV2A0A075B6R0 118 aa15.54■□□□□ 0.08
RNF39-201ENST00000244360 TRBV6-4A0A1B0GX49 114 aa15.54■□□□□ 0.08
RNF39-201ENST00000244360 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.53■□□□□ 0.08
RNF39-201ENST00000244360 PF4P02776 101 aa15.53■□□□□ 0.08
RNF39-201ENST00000244360 LINC00242Q5T6M2 205 aa15.52■□□□□ 0.08
RNF39-201ENST00000244360 UBE2WQ96B02 151 aa15.52■□□□□ 0.08
RNF39-201ENST00000244360 NPC2P61916 151 aa15.52■□□□□ 0.07
RNF39-201ENST00000244360 C2orf82Q6UX34 121 aa15.51■□□□□ 0.07
RNF39-201ENST00000244360 LST1O00453 97 aa15.51■□□□□ 0.07
RNF39-201ENST00000244360 COX6A2Q02221 97 aa15.51■□□□□ 0.07
RNF39-201ENST00000244360 NOTCH3Q9UM47 2321 aa15.5■□□□□ 0.07
RNF39-201ENST00000244360 CDC42SE2Q9NRR3 84 aa15.5■□□□□ 0.07
RNF39-201ENST00000244360 GCN1Q92616 2671 aaKnown RBP15.49■□□□□ 0.07
RNF39-201ENST00000244360 H7C423 109 aa15.49■□□□□ 0.07
RNF39-201ENST00000244360 Q9H8V8 135 aa15.49■□□□□ 0.07
RNF39-201ENST00000244360 TMEM243Q9BU79 118 aa15.48■□□□□ 0.07
RNF39-201ENST00000244360 TRAV8-4A0A0B4J246 113 aa15.48■□□□□ 0.07
RNF39-201ENST00000244360 LINC00308Q8TCZ7 52 aa15.48■□□□□ 0.07
RNF39-201ENST00000244360 LOC100131303A0A0U1RQF7 123 aa15.47■□□□□ 0.07
RNF39-201ENST00000244360 SMIM1B2RUZ4 78 aa15.47■□□□□ 0.07
RNF39-201ENST00000244360 FHL2Q14192 279 aa15.47■□□□□ 0.07
RNF39-201ENST00000244360 CITED1Q99966 193 aa15.47■□□□□ 0.07
RNF39-201ENST00000244360 PPDPFQ9H3Y8 114 aa15.47■□□□□ 0.07
RNF39-201ENST00000244360 HECTD1Q9ULT8 2610 aa15.46■□□□□ 0.07
RNF39-201ENST00000244360 TRGV4A0A0C4DH28 118 aa15.46■□□□□ 0.07
RNF39-201ENST00000244360 TEX49A0A1B0GTD5 131 aa15.46■□□□□ 0.07
RNF39-201ENST00000244360 HERV-K104P63124 156 aa15.45■□□□□ 0.06
RNF39-201ENST00000244360 DAND5Q8N907 189 aa15.45■□□□□ 0.06
RNF39-201ENST00000244360 LINC00612Q8N6U2 182 aa15.45■□□□□ 0.06
RNF39-201ENST00000244360 SNCGO76070 127 aa15.44■□□□□ 0.06
RNF39-201ENST00000244360 CLEC2BQ92478 149 aa15.44■□□□□ 0.06
RNF39-201ENST00000244360 KIR2DL5BQ8NHK3 375 aa15.44■□□□□ 0.06
RNF39-201ENST00000244360 UBE2L6O14933 153 aa15.43■□□□□ 0.06
RNF39-201ENST00000244360 OTOGQ6ZRI0 2925 aa15.43■□□□□ 0.06
RNF39-201ENST00000244360 TRAV13-1A0A0B4J241 112 aa15.43■□□□□ 0.06
RNF39-201ENST00000244360 INAFM1C9JVW0 142 aa15.43■□□□□ 0.06
RNF39-201ENST00000244360 F5H768 121 aa15.42■□□□□ 0.06
RNF39-201ENST00000244360 ZNF625Q96I27 306 aaPredicted RBP15.42■□□□□ 0.06
RNF39-201ENST00000244360 CRLF1O75462 422 aa15.41■□□□□ 0.06
RNF39-201ENST00000244360 DEFB121Q5J5C9 76 aa15.41■□□□□ 0.06
RNF39-201ENST00000244360 PRIMA1Q86XR5 153 aa15.41■□□□□ 0.06
RNF39-201ENST00000244360 MEIG1Q5JSS6 88 aa15.4■□□□□ 0.06
RNF39-201ENST00000244360 C2CD3Q4AC94 2353 aa15.4■□□□□ 0.06
RNF39-201ENST00000244360 FAM240AA0A1B0GVK7 77 aa15.4■□□□□ 0.06
RNF39-201ENST00000244360 MRPL23Q16540 153 aaKnown RBP15.4■□□□□ 0.06
RNF39-201ENST00000244360 C9orf66Q5T8R8 295 aa15.4■□□□□ 0.06
RNF39-201ENST00000244360 Q6Q795 121 aa15.4■□□□□ 0.06
RNF39-201ENST00000244360 COX7A2LO14548 114 aa15.39■□□□□ 0.05
RNF39-201ENST00000244360 X6R8D5 127 aa15.39■□□□□ 0.05
RNF39-201ENST00000244360 TRBV6-8A0A0A6YYG3 113 aa15.39■□□□□ 0.05
RNF39-201ENST00000244360 GAGE2BQ13066 116 aa15.39■□□□□ 0.05
RNF39-201ENST00000244360 GAGE2EQ4V326 116 aa15.39■□□□□ 0.05
RNF39-201ENST00000244360 SPATA3Q8NHX4 192 aa15.39■□□□□ 0.05
RNF39-201ENST00000244360 GAGE2DQ9UEU5 116 aa15.39■□□□□ 0.05
RNF39-201ENST00000244360 SMIM9A6NGZ8 99 aa15.37■□□□□ 0.05
RNF39-201ENST00000244360 NSD1Q96L73 2696 aaPredicted RBP15.37■□□□□ 0.05
RNF39-201ENST00000244360 SHISA2Q6UWI4 295 aa15.37■□□□□ 0.05
RNF39-201ENST00000244360 ANAPC13Q9BS18 74 aa15.37■□□□□ 0.05
RNF39-201ENST00000244360 NOTCH2Q04721 2471 aa15.37■□□□□ 0.05
RNF39-201ENST00000244360 SOSTDC1Q6X4U4 206 aa15.36■□□□□ 0.05
RNF39-201ENST00000244360 DEFB130BP0DP73 79 aa15.35■□□□□ 0.05
RNF39-201ENST00000244360 DEFB130AP0DP74 79 aa15.35■□□□□ 0.05
RNF39-201ENST00000244360 GAGE6Q13070 117 aa15.34■□□□□ 0.05
RNF39-201ENST00000244360 TRAV26-1A0A087WT03 109 aa15.33■□□□□ 0.04
RNF39-201ENST00000244360 A0A0U1RRA0 63 aa15.33■□□□□ 0.04
RNF39-201ENST00000244360 FN1P02751 2386 aaKnown RBP15.33■□□□□ 0.04
RNF39-201ENST00000244360 C15orf53Q8NAA6 179 aa15.32■□□□□ 0.04
RNF39-201ENST00000244360 TRACP01848 142 aa15.32■□□□□ 0.04
RNF39-201ENST00000244360 IGLV4-60A0A075B6I1 120 aa15.31■□□□□ 0.04
RNF39-201ENST00000244360 FAM222AQ5U5X8 452 aa15.31■□□□□ 0.04
RNF39-201ENST00000244360 CHCHD5Q9BSY4 110 aa15.31■□□□□ 0.04
RNF39-201ENST00000244360 VWFP04275 2813 aa15.3■□□□□ 0.04
RNF39-201ENST00000244360 COX7B2Q8TF08 81 aa15.29■□□□□ 0.04
RNF39-201ENST00000244360 TRAV13-2A0A0B4J235 113 aa15.29■□□□□ 0.04
RNF39-201ENST00000244360 ACYP1P07311 99 aa15.29■□□□□ 0.04
RNF39-201ENST00000244360 LYRM9A8MSI8 78 aa15.28■□□□□ 0.04
RNF39-201ENST00000244360 GYPEP15421 78 aa15.28■□□□□ 0.04
RNF39-201ENST00000244360 TTC32Q5I0X7 151 aa15.28■□□□□ 0.04
RNF39-201ENST00000244360 NDUFV3P56181 108 aaKnown RBP15.27■□□□□ 0.04
RNF39-201ENST00000244360 PRO0255Q9UI72 69 aa15.27■□□□□ 0.04
RNF39-201ENST00000244360 IGHV3OR16-9A0A0B4J2B5 98 aa15.25■□□□□ 0.03
RNF39-201ENST00000244360 APOC4P55056 127 aa15.24■□□□□ 0.03
RNF39-201ENST00000244360 CRPP02741 224 aa15.24■□□□□ 0.03
RNF39-201ENST00000244360 RPL28P46779 137 aaKnown RBP15.23■□□□□ 0.03
RNF39-201ENST00000244360 DEFB135Q30KP9 77 aa15.23■□□□□ 0.03
RNF39-201ENST00000244360 HIVEP1P15822 2718 aa15.22■□□□□ 0.03
RNF39-201ENST00000244360 TENM1Q9UKZ4 2725 aa15.22■□□□□ 0.03
RNF39-201ENST00000244360 A0A087WZ39 114 aa15.21■□□□□ 0.03
RNF39-201ENST00000244360 A0A1B0GUV1 79 aa15.21■□□□□ 0.03
RNF39-201ENST00000244360 NHLRC4P0CG21 123 aaPredicted RBP15.21■□□□□ 0.03
RNF39-201ENST00000244360 IGKV3OR2-268A0A0C4DH90 116 aa15.21■□□□□ 0.03
RNF39-201ENST00000244360 MIR7-3HGQ8N6C7 128 aa15.21■□□□□ 0.03
RNF39-201ENST00000244360 LINC00959A0A1B0GUT2 108 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms