RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 FAM19A3Q7Z5A8 133 aa10.24□□□□□ -0.77
HIF3A-202ENST00000244303 Q9H8V8 135 aa10.24□□□□□ -0.77
HIF3A-202ENST00000244303 CSDC2Q9Y534 153 aaKnown RBP10.24□□□□□ -0.77
HIF3A-202ENST00000244303 B5MCH6 92 aa10.24□□□□□ -0.77
HIF3A-202ENST00000244303 HILS1P60008 231 aa10.24□□□□□ -0.77
HIF3A-202ENST00000244303 ZNF625Q96I27 306 aaPredicted RBP10.24□□□□□ -0.77
HIF3A-202ENST00000244303 HELZ2Q9BYK8 2649 aaKnown RBP10.24□□□□□ -0.77
HIF3A-202ENST00000244303 SMIM1B2RUZ4 78 aa10.23□□□□□ -0.77
HIF3A-202ENST00000244303 SMR3AQ99954 134 aa10.23□□□□□ -0.77
HIF3A-202ENST00000244303 ITPR2Q14571 2701 aa10.23□□□□□ -0.77
HIF3A-202ENST00000244303 CIRBPQ14011 172 aaKnown RBP10.23□□□□□ -0.77
HIF3A-202ENST00000244303 C15orf53Q8NAA6 179 aa10.23□□□□□ -0.77
HIF3A-202ENST00000244303 CDC42SE2Q9NRR3 84 aa10.23□□□□□ -0.77
HIF3A-202ENST00000244303 ANK3Q12955 4377 aaKnown RBP10.23□□□□□ -0.77
HIF3A-202ENST00000244303 PLAC8L1A1L4L8 177 aa10.22□□□□□ -0.77
HIF3A-202ENST00000244303 H7C423 109 aa10.22□□□□□ -0.77
HIF3A-202ENST00000244303 RPL35AP18077 110 aaKnown RBP10.22□□□□□ -0.77
HIF3A-202ENST00000244303 A0A0U1RRA0 63 aa10.22□□□□□ -0.77
HIF3A-202ENST00000244303 GAGE7O76087 117 aa10.22□□□□□ -0.77
HIF3A-202ENST00000244303 NHLRC4P0CG21 123 aaPredicted RBP10.22□□□□□ -0.77
HIF3A-202ENST00000244303 GAGE12FP0CL80 117 aa10.22□□□□□ -0.77
HIF3A-202ENST00000244303 GAGE12GP0CL81 117 aa10.22□□□□□ -0.77
HIF3A-202ENST00000244303 GAGE12IP0CL82 117 aa10.22□□□□□ -0.77
HIF3A-202ENST00000244303 CLEC2BQ92478 149 aa10.22□□□□□ -0.77
HIF3A-202ENST00000244303 LINC00308Q8TCZ7 52 aa10.21□□□□□ -0.77
HIF3A-202ENST00000244303 C16orf74Q96GX8 76 aa10.21□□□□□ -0.77
HIF3A-202ENST00000244303 TRGV2A0A075B6R0 118 aa10.21□□□□□ -0.78
HIF3A-202ENST00000244303 LOC100131303A0A0U1RQF7 123 aa10.21□□□□□ -0.78
HIF3A-202ENST00000244303 LINC01600Q96MT4 127 aa10.21□□□□□ -0.78
HIF3A-202ENST00000244303 UBE2L6O14933 153 aa10.2□□□□□ -0.78
HIF3A-202ENST00000244303 UNC79Q9P2D8 2635 aa10.2□□□□□ -0.78
HIF3A-202ENST00000244303 C2CD3Q4AC94 2353 aa10.2□□□□□ -0.78
HIF3A-202ENST00000244303 F5H768 121 aa10.19□□□□□ -0.78
HIF3A-202ENST00000244303 H3BT86 120 aa10.19□□□□□ -0.78
HIF3A-202ENST00000244303 IGLV1-51P01701 117 aa10.19□□□□□ -0.78
HIF3A-202ENST00000244303 CMC4P56277 68 aaPredicted RBP10.19□□□□□ -0.78
HIF3A-202ENST00000244303 C19orf73Q9NVV2 129 aa10.19□□□□□ -0.78
HIF3A-202ENST00000244303 TMEM243Q9BU79 118 aa10.19□□□□□ -0.78
HIF3A-202ENST00000244303 MTORP42345 2549 aa10.19□□□□□ -0.78
HIF3A-202ENST00000244303 Q6Q795 121 aa10.18□□□□□ -0.78
HIF3A-202ENST00000244303 PRIMA1Q86XR5 153 aa10.18□□□□□ -0.78
HIF3A-202ENST00000244303 LST1O00453 97 aa10.18□□□□□ -0.78
HIF3A-202ENST00000244303 SOSTDC1Q6X4U4 206 aa10.18□□□□□ -0.78
HIF3A-202ENST00000244303 CSNK1G2-AS1Q8NCQ2 148 aa10.18□□□□□ -0.78
HIF3A-202ENST00000244303 CCDC179H3BU77 68 aa10.17□□□□□ -0.78
HIF3A-202ENST00000244303 MEIG1Q5JSS6 88 aa10.17□□□□□ -0.78
HIF3A-202ENST00000244303 LY6G6DO95868 133 aa10.17□□□□□ -0.78
HIF3A-202ENST00000244303 FAM110AQ9BQ89 295 aa10.17□□□□□ -0.78
HIF3A-202ENST00000244303 TRBV6-4A0A1B0GX49 114 aa10.16□□□□□ -0.78
HIF3A-202ENST00000244303 FASNP49327 2511 aaKnown RBP10.16□□□□□ -0.78
HIF3A-202ENST00000244303 TRGV4A0A0C4DH28 118 aa10.16□□□□□ -0.78
HIF3A-202ENST00000244303 OVOL2Q9BRP0 275 aa10.16□□□□□ -0.78
HIF3A-202ENST00000244303 KRTAP10-3P60369 221 aa10.14□□□□□ -0.79
HIF3A-202ENST00000244303 HERV-K104P63124 156 aa10.14□□□□□ -0.79
HIF3A-202ENST00000244303 COPS9Q8WXC6 57 aa10.14□□□□□ -0.79
HIF3A-202ENST00000244303 MRPL23Q16540 153 aaKnown RBP10.13□□□□□ -0.79
HIF3A-202ENST00000244303 HIVEP2P31629 2446 aa10.13□□□□□ -0.79
HIF3A-202ENST00000244303 IGKV3OR2-268A0A0C4DH90 116 aa10.13□□□□□ -0.79
HIF3A-202ENST00000244303 FHL2Q14192 279 aa10.13□□□□□ -0.79
HIF3A-202ENST00000244303 IGLV4-60A0A075B6I1 120 aa10.12□□□□□ -0.79
HIF3A-202ENST00000244303 FAM240AA0A1B0GVK7 77 aa10.11□□□□□ -0.79
HIF3A-202ENST00000244303 TRBV6-8A0A0A6YYG3 113 aa10.1□□□□□ -0.79
HIF3A-202ENST00000244303 COX7A2LO14548 114 aa10.1□□□□□ -0.79
HIF3A-202ENST00000244303 SHISA2Q6UWI4 295 aa10.1□□□□□ -0.79
HIF3A-202ENST00000244303 DEFB121Q5J5C9 76 aa10.1□□□□□ -0.79
HIF3A-202ENST00000244303 COX7B2Q8TF08 81 aa10.1□□□□□ -0.79
HIF3A-202ENST00000244303 CHCHD5Q9BSY4 110 aa10.09□□□□□ -0.79
HIF3A-202ENST00000244303 TOMM7Q9P0U1 55 aa10.09□□□□□ -0.79
HIF3A-202ENST00000244303 PF4P02776 101 aa10.08□□□□□ -0.8
HIF3A-202ENST00000244303 INAFM1C9JVW0 142 aa10.07□□□□□ -0.8
HIF3A-202ENST00000244303 DEFB130BP0DP73 79 aa10.07□□□□□ -0.8
HIF3A-202ENST00000244303 DEFB130AP0DP74 79 aa10.07□□□□□ -0.8
HIF3A-202ENST00000244303 LINC00482Q8N8I6 264 aa10.07□□□□□ -0.8
HIF3A-202ENST00000244303 HECTD1Q9ULT8 2610 aa10.07□□□□□ -0.8
HIF3A-202ENST00000244303 GCN1Q92616 2671 aaKnown RBP10.07□□□□□ -0.8
HIF3A-202ENST00000244303 MIR7-3HGQ8N6C7 128 aa10.07□□□□□ -0.8
HIF3A-202ENST00000244303 PPDPFQ9H3Y8 114 aa10.07□□□□□ -0.8
HIF3A-202ENST00000244303 IGHV3OR16-9A0A0B4J2B5 98 aa10.06□□□□□ -0.8
HIF3A-202ENST00000244303 ACYP1P07311 99 aa10.05□□□□□ -0.8
HIF3A-202ENST00000244303 TRBV7-7A0A0K0K1E9 115 aa10.04□□□□□ -0.8
HIF3A-202ENST00000244303 FN1P02751 2386 aaKnown RBP10.04□□□□□ -0.8
HIF3A-202ENST00000244303 C5orf38Q86SI9 138 aa10.04□□□□□ -0.8
HIF3A-202ENST00000244303 KIR2DL5BQ8NHK3 375 aa10.04□□□□□ -0.8
HIF3A-202ENST00000244303 LINC00158P58513 81 aa10.03□□□□□ -0.8
HIF3A-202ENST00000244303 FAM218AQ96MZ4 157 aa10.03□□□□□ -0.8
HIF3A-202ENST00000244303 IGKV2-28A0A075B6P5 120 aa10.03□□□□□ -0.8
HIF3A-202ENST00000244303 A0A087WZ39 114 aa10.03□□□□□ -0.8
HIF3A-202ENST00000244303 TRAV13-2A0A0B4J235 113 aa10.03□□□□□ -0.8
HIF3A-202ENST00000244303 IGKV2D-28P01615 120 aa10.03□□□□□ -0.8
HIF3A-202ENST00000244303 CRPP02741 224 aa10.03□□□□□ -0.8
HIF3A-202ENST00000244303 GYPEP15421 78 aa10.03□□□□□ -0.8
HIF3A-202ENST00000244303 SMIM20Q8N5G0 67 aa10.03□□□□□ -0.8
HIF3A-202ENST00000244303 LINC00337Q8N6G1 96 aa10.03□□□□□ -0.8
HIF3A-202ENST00000244303 SND1-IT1Q9HBX3 110 aa10.03□□□□□ -0.8
HIF3A-202ENST00000244303 FAM236AA0A1B0GUQ0 79 aa10.02□□□□□ -0.81
HIF3A-202ENST00000244303 LINC00959A0A1B0GUT2 108 aa10.02□□□□□ -0.81
HIF3A-202ENST00000244303 FAM236BA0A1B0GV22 79 aa10.02□□□□□ -0.81
HIF3A-202ENST00000244303 TRACP01848 142 aa10.02□□□□□ -0.81
HIF3A-202ENST00000244303 LINC00612Q8N6U2 182 aa10.02□□□□□ -0.81
HIF3A-202ENST00000244303 NOTCH2Q04721 2471 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms