RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 CXCL5P42830 114 aa10.09□□□□□ -0.79
SF1-201ENST00000227503 RPL18AQ02543 176 aaKnown RBP10.09□□□□□ -0.79
SF1-201ENST00000227503 ZNF702PQ9H963 129 aa10.09□□□□□ -0.79
SF1-201ENST00000227503 NCR3O14931 201 aa10.09□□□□□ -0.79
SF1-201ENST00000227503 MAPK1IP1LQ8NDC0 245 aa10.09□□□□□ -0.79
SF1-201ENST00000227503 UBE2E2Q96LR5 201 aa10.09□□□□□ -0.79
SF1-201ENST00000227503 J3QLI3 93 aa10.08□□□□□ -0.8
SF1-201ENST00000227503 HILS1P60008 231 aa10.08□□□□□ -0.8
SF1-201ENST00000227503 OR13C6PQ8NH95 151 aa10.08□□□□□ -0.8
SF1-201ENST00000227503 SMIM1B2RUZ4 78 aa10.08□□□□□ -0.8
SF1-201ENST00000227503 LINC00337Q8N6G1 96 aa10.08□□□□□ -0.8
SF1-201ENST00000227503 LINC01561Q8N1V8 128 aa10.08□□□□□ -0.8
SF1-201ENST00000227503 ANKRD17O75179 2603 aaKnown RBP10.07□□□□□ -0.8
SF1-201ENST00000227503 INAFM2P0DMQ5 153 aa10.07□□□□□ -0.8
SF1-201ENST00000227503 NBPF19A0A087WUL8 3843 aa10.06□□□□□ -0.8
SF1-201ENST00000227503 FSHBP01225 129 aa10.06□□□□□ -0.8
SF1-201ENST00000227503 Q6YL49 198 aa10.06□□□□□ -0.8
SF1-201ENST00000227503 JMJD1CQ15652 2540 aa10.06□□□□□ -0.8
SF1-201ENST00000227503 IGKV3OR2-268A0A0C4DH90 116 aa10.06□□□□□ -0.8
SF1-201ENST00000227503 A8MTW9 85 aa10.06□□□□□ -0.8
SF1-201ENST00000227503 C18orf65Q6ZTR6 163 aa10.06□□□□□ -0.8
SF1-201ENST00000227503 CCDC168Q8NDH2 2452 aa10.06□□□□□ -0.8
SF1-201ENST00000227503 RBMY1BA6NDE4 496 aaKnown RBP10.05□□□□□ -0.8
SF1-201ENST00000227503 RBMY1EA6NEQ0 496 aaKnown RBP10.05□□□□□ -0.8
SF1-201ENST00000227503 RBMY1DP0C7P1 496 aaKnown RBP10.05□□□□□ -0.8
SF1-201ENST00000227503 HIST2H2BDQ6DRA6 164 aa10.05□□□□□ -0.8
SF1-201ENST00000227503 MXRA5Q9NR99 2828 aa10.05□□□□□ -0.8
SF1-201ENST00000227503 IGLV5-39A0A0G2JS06 123 aa10.05□□□□□ -0.8
SF1-201ENST00000227503 USP17L23D6RBM5 183 aa10.05□□□□□ -0.8
SF1-201ENST00000227503 UPK3BQ9BT76 320 aa10.05□□□□□ -0.8
SF1-201ENST00000227503 TOMM7Q9P0U1 55 aa10.05□□□□□ -0.8
SF1-201ENST00000227503 MYO9AB2RTY4 2548 aa10.05□□□□□ -0.8
SF1-201ENST00000227503 SLURP1P55000 103 aa10.04□□□□□ -0.8
SF1-201ENST00000227503 DEFB131AP59861 70 aa10.04□□□□□ -0.8
SF1-201ENST00000227503 IGLV5-45A0A087WSX0 123 aa10.04□□□□□ -0.8
SF1-201ENST00000227503 DEFB136Q30KP8 78 aa10.04□□□□□ -0.8
SF1-201ENST00000227503 Q96MF0 132 aa10.04□□□□□ -0.8
SF1-201ENST00000227503 SONP18583 2426 aaKnown RBP10.04□□□□□ -0.8
SF1-201ENST00000227503 NAV2Q8IVL1 2488 aa10.04□□□□□ -0.8
SF1-201ENST00000227503 IGKV2-28A0A075B6P5 120 aa10.04□□□□□ -0.8
SF1-201ENST00000227503 IGKV2D-28P01615 120 aa10.04□□□□□ -0.8
SF1-201ENST00000227503 HIST2H2BCQ6DN03 193 aa10.04□□□□□ -0.8
SF1-201ENST00000227503 SERP2Q8N6R1 65 aa10.04□□□□□ -0.8
SF1-201ENST00000227503 LECT2O14960 151 aa10.03□□□□□ -0.8
SF1-201ENST00000227503 IGHV3-53P01767 116 aa10.03□□□□□ -0.8
SF1-201ENST00000227503 CRPP02741 224 aa10.03□□□□□ -0.8
SF1-201ENST00000227503 FHL2Q14192 279 aa10.03□□□□□ -0.8
SF1-201ENST00000227503 MIR7-3HGQ8N6C7 128 aa10.03□□□□□ -0.8
SF1-201ENST00000227503 SMIM11BQ8TCY0 68 aa10.03□□□□□ -0.8
SF1-201ENST00000227503 SETD2Q9BYW2 2564 aaPredicted RBP10.03□□□□□ -0.8
SF1-201ENST00000227503 TEX15Q9BXT5 2789 aa10.03□□□□□ -0.8
SF1-201ENST00000227503 ZNF469Q96JG9 3925 aaPredicted RBP10.02□□□□□ -0.81
SF1-201ENST00000227503 NIPBLQ6KC79 2804 aaeCLIP10.02□□□□□ -0.81
SF1-201ENST00000227503 FAM222AQ5U5X8 452 aa10.02□□□□□ -0.81
SF1-201ENST00000227503 Q5XG85 94 aa10.02□□□□□ -0.81
SF1-201ENST00000227503 TRAV25A0A0B4J276 109 aa10.01□□□□□ -0.81
SF1-201ENST00000227503 RPS28P62857 69 aaKnown RBP10.01□□□□□ -0.81
SF1-201ENST00000227503 CHD6Q8TD26 2715 aa10.01□□□□□ -0.81
SF1-201ENST00000227503 TRAV23DV6A0A075B6W5 121 aa10.01□□□□□ -0.81
SF1-201ENST00000227503 IGHV4-31P0DP07 118 aa10□□□□□ -0.81
SF1-201ENST00000227503 TMEM258P61165 79 aa10□□□□□ -0.81
SF1-201ENST00000227503 SND1-IT1Q9HBX3 110 aa10□□□□□ -0.81
SF1-201ENST00000227503 F5H768 121 aa9.99□□□□□ -0.81
SF1-201ENST00000227503 C11orf68Q9H3H3 251 aaKnown RBP9.99□□□□□ -0.81
SF1-201ENST00000227503 RPL28P46779 137 aaKnown RBP9.99□□□□□ -0.81
SF1-201ENST00000227503 PFN2P35080 140 aa9.98□□□□□ -0.81
SF1-201ENST00000227503 LINC00158P58513 81 aa9.98□□□□□ -0.81
SF1-201ENST00000227503 ZNF415Q09FC8 603 aa9.98□□□□□ -0.81
SF1-201ENST00000227503 FAM19A1Q7Z5A9 133 aa9.98□□□□□ -0.81
SF1-201ENST00000227503 C11orf72Q8NBR9 251 aa9.98□□□□□ -0.81
SF1-201ENST00000227503 RPL36AP83881 106 aaKnown RBP9.98□□□□□ -0.81
SF1-201ENST00000227503 Q6JHZ5 121 aa9.98□□□□□ -0.81
SF1-201ENST00000227503 NTM-AS1Q6ZSK4 140 aa9.98□□□□□ -0.81
SF1-201ENST00000227503 RPL36ALQ969Q0 106 aaKnown RBP9.98□□□□□ -0.81
SF1-201ENST00000227503 MAP6D1Q9H9H5 199 aa9.98□□□□□ -0.81
SF1-201ENST00000227503 NF1P21359 2839 aa9.98□□□□□ -0.81
SF1-201ENST00000227503 BBC3Q96PG8 261 aaPredicted RBP9.97□□□□□ -0.81
SF1-201ENST00000227503 TRAV13-2A0A0B4J235 113 aa9.96□□□□□ -0.81
SF1-201ENST00000227503 GHRHP01286 108 aa9.96□□□□□ -0.81
SF1-201ENST00000227503 RNASE1P07998 156 aaKnown RBP9.96□□□□□ -0.82
SF1-201ENST00000227503 C4orf3Q8WVX3 66 aa9.96□□□□□ -0.82
SF1-201ENST00000227503 CR1P17927 2039 aa9.95□□□□□ -0.82
SF1-201ENST00000227503 C20orf197Q8N268 126 aa9.95□□□□□ -0.82
SF1-201ENST00000227503 CCL18P55774 89 aa9.95□□□□□ -0.82
SF1-201ENST00000227503 KRTAP10-9P60411 292 aa9.94□□□□□ -0.82
SF1-201ENST00000227503 SS18Q15532 418 aa9.94□□□□□ -0.82
SF1-201ENST00000227503 DEFB114Q30KQ6 69 aa9.94□□□□□ -0.82
SF1-201ENST00000227503 ENHOQ6UWT2 76 aa9.94□□□□□ -0.82
SF1-201ENST00000227503 COPS9Q8WXC6 57 aa9.94□□□□□ -0.82
SF1-201ENST00000227503 ACANP16112 2415 aa9.94□□□□□ -0.82
SF1-201ENST00000227503 XCL2Q9UBD3 114 aa9.93□□□□□ -0.82
SF1-201ENST00000227503 APCP25054 2843 aa9.93□□□□□ -0.82
SF1-201ENST00000227503 TENM4Q6N022 2769 aa9.93□□□□□ -0.82
SF1-201ENST00000227503 TRGV1A0A0A0MS02 117 aa9.93□□□□□ -0.82
SF1-201ENST00000227503 PAX4O43316 350 aa9.93□□□□□ -0.82
SF1-201ENST00000227503 UBR5O95071 2799 aaPredicted RBP9.93□□□□□ -0.82
SF1-201ENST00000227503 DYNLRB2Q8TF09 96 aa9.93□□□□□ -0.82
SF1-201ENST00000227503 CDC42SE2Q9NRR3 84 aa9.93□□□□□ -0.82
SF1-201ENST00000227503 FN1P02751 2386 aaKnown RBP9.92□□□□□ -0.82
SF1-201ENST00000227503 WIPF1O43516 503 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms