RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 RPL13AP40429 203 aaKnown RBP15.77■□□□□ 0.12
CCDC9-201ENST00000221922 CKS1BP61024 79 aa15.77■□□□□ 0.12
CCDC9-201ENST00000221922 LINC00242Q5T6M2 205 aa15.77■□□□□ 0.12
CCDC9-201ENST00000221922 TRGV2A0A075B6R0 118 aa15.77■□□□□ 0.11
CCDC9-201ENST00000221922 COX6CP09669 75 aa15.77■□□□□ 0.11
CCDC9-201ENST00000221922 NPC2P61916 151 aa15.77■□□□□ 0.11
CCDC9-201ENST00000221922 NTN5Q8WTR8 489 aaPredicted RBP15.77■□□□□ 0.11
CCDC9-201ENST00000221922 NSD1Q96L73 2696 aaPredicted RBP15.76■□□□□ 0.11
CCDC9-201ENST00000221922 GAGE12JA6NER3 117 aa15.75■□□□□ 0.11
CCDC9-201ENST00000221922 LINC00694P0DN24 101 aa15.75■□□□□ 0.11
CCDC9-201ENST00000221922 GAGE4Q13068 117 aa15.75■□□□□ 0.11
CCDC9-201ENST00000221922 GAGE5Q13069 117 aa15.75■□□□□ 0.11
CCDC9-201ENST00000221922 GAGE7O76087 117 aa15.75■□□□□ 0.11
CCDC9-201ENST00000221922 GAGE12FP0CL80 117 aa15.75■□□□□ 0.11
CCDC9-201ENST00000221922 GAGE12GP0CL81 117 aa15.75■□□□□ 0.11
CCDC9-201ENST00000221922 GAGE12IP0CL82 117 aa15.75■□□□□ 0.11
CCDC9-201ENST00000221922 JMJD1CQ15652 2540 aa15.75■□□□□ 0.11
CCDC9-201ENST00000221922 CIRBPQ14011 172 aaKnown RBP15.74■□□□□ 0.11
CCDC9-201ENST00000221922 TRBV6-4A0A1B0GX49 114 aa15.74■□□□□ 0.11
CCDC9-201ENST00000221922 NTM-AS1Q6ZSK4 140 aa15.74■□□□□ 0.11
CCDC9-201ENST00000221922 H7C423 109 aa15.72■□□□□ 0.11
CCDC9-201ENST00000221922 DAND5Q8N907 189 aa15.72■□□□□ 0.11
CCDC9-201ENST00000221922 Q9H8V8 135 aa15.72■□□□□ 0.11
CCDC9-201ENST00000221922 SMIM1B2RUZ4 78 aa15.71■□□□□ 0.11
CCDC9-201ENST00000221922 LST1O00453 97 aa15.71■□□□□ 0.11
CCDC9-201ENST00000221922 NOTCH3Q9UM47 2321 aa15.71■□□□□ 0.11
CCDC9-201ENST00000221922 TEX49A0A1B0GTD5 131 aa15.71■□□□□ 0.1
CCDC9-201ENST00000221922 H3BT86 120 aa15.71■□□□□ 0.1
CCDC9-201ENST00000221922 LINC00308Q8TCZ7 52 aa15.71■□□□□ 0.1
CCDC9-201ENST00000221922 TMEM243Q9BU79 118 aa15.71■□□□□ 0.1
CCDC9-201ENST00000221922 C2orf82Q6UX34 121 aa15.7■□□□□ 0.1
CCDC9-201ENST00000221922 TRGV4A0A0C4DH28 118 aa15.69■□□□□ 0.1
CCDC9-201ENST00000221922 UBE2L6O14933 153 aa15.69■□□□□ 0.1
CCDC9-201ENST00000221922 CRLF1O75462 422 aa15.69■□□□□ 0.1
CCDC9-201ENST00000221922 CDC42SE2Q9NRR3 84 aa15.69■□□□□ 0.1
CCDC9-201ENST00000221922 C2CD3Q4AC94 2353 aa15.69■□□□□ 0.1
CCDC9-201ENST00000221922 CLEC2BQ92478 149 aa15.69■□□□□ 0.1
CCDC9-201ENST00000221922 UBE2WQ96B02 151 aa15.69■□□□□ 0.1
CCDC9-201ENST00000221922 CITED1Q99966 193 aa15.68■□□□□ 0.1
CCDC9-201ENST00000221922 F5H768 121 aa15.67■□□□□ 0.1
CCDC9-201ENST00000221922 C9orf66Q5T8R8 295 aa15.67■□□□□ 0.1
CCDC9-201ENST00000221922 TRAV13-1A0A0B4J241 112 aa15.67■□□□□ 0.1
CCDC9-201ENST00000221922 FN1P02751 2386 aaKnown RBP15.67■□□□□ 0.1
CCDC9-201ENST00000221922 ZNF625Q96I27 306 aaPredicted RBP15.67■□□□□ 0.1
CCDC9-201ENST00000221922 COPS9Q8WXC6 57 aa15.66■□□□□ 0.1
CCDC9-201ENST00000221922 FHL2Q14192 279 aa15.64■□□□□ 0.09
CCDC9-201ENST00000221922 HIVEP1P15822 2718 aa15.64■□□□□ 0.09
CCDC9-201ENST00000221922 TRAV8-4A0A0B4J246 113 aa15.63■□□□□ 0.09
CCDC9-201ENST00000221922 LOC100131303A0A0U1RQF7 123 aa15.63■□□□□ 0.09
CCDC9-201ENST00000221922 KIR2DL5BQ8NHK3 375 aa15.63■□□□□ 0.09
CCDC9-201ENST00000221922 SOSTDC1Q6X4U4 206 aa15.63■□□□□ 0.09
CCDC9-201ENST00000221922 PPDPFQ9H3Y8 114 aa15.63■□□□□ 0.09
CCDC9-201ENST00000221922 HERV-K104P63124 156 aa15.62■□□□□ 0.09
CCDC9-201ENST00000221922 DEFB121Q5J5C9 76 aa15.62■□□□□ 0.09
CCDC9-201ENST00000221922 PRIMA1Q86XR5 153 aa15.61■□□□□ 0.09
CCDC9-201ENST00000221922 SPATA3Q8NHX4 192 aa15.61■□□□□ 0.09
CCDC9-201ENST00000221922 SHISA2Q6UWI4 295 aa15.6■□□□□ 0.09
CCDC9-201ENST00000221922 LINC00612Q8N6U2 182 aa15.59■□□□□ 0.09
CCDC9-201ENST00000221922 A0A0U1RRA0 63 aa15.59■□□□□ 0.09
CCDC9-201ENST00000221922 SMIM9A6NGZ8 99 aa15.59■□□□□ 0.09
CCDC9-201ENST00000221922 SNCGO76070 127 aa15.58■□□□□ 0.09
CCDC9-201ENST00000221922 TRBV6-8A0A0A6YYG3 113 aa15.58■□□□□ 0.08
CCDC9-201ENST00000221922 COX7A2LO14548 114 aa15.58■□□□□ 0.08
CCDC9-201ENST00000221922 MEIG1Q5JSS6 88 aa15.58■□□□□ 0.08
CCDC9-201ENST00000221922 FAM240AA0A1B0GVK7 77 aa15.56■□□□□ 0.08
CCDC9-201ENST00000221922 DEFB130BP0DP73 79 aa15.55■□□□□ 0.08
CCDC9-201ENST00000221922 DEFB130AP0DP74 79 aa15.55■□□□□ 0.08
CCDC9-201ENST00000221922 GAGE6Q13070 117 aa15.55■□□□□ 0.08
CCDC9-201ENST00000221922 CYSRT1A8MQ03 144 aa15.55■□□□□ 0.08
CCDC9-201ENST00000221922 GAGE2BQ13066 116 aa15.55■□□□□ 0.08
CCDC9-201ENST00000221922 GAGE2EQ4V326 116 aa15.55■□□□□ 0.08
CCDC9-201ENST00000221922 GAGE2DQ9UEU5 116 aa15.55■□□□□ 0.08
CCDC9-201ENST00000221922 Q6Q795 121 aa15.54■□□□□ 0.08
CCDC9-201ENST00000221922 X6R8D5 127 aa15.54■□□□□ 0.08
CCDC9-201ENST00000221922 VWFP04275 2813 aa15.54■□□□□ 0.08
CCDC9-201ENST00000221922 TRAV26-1A0A087WT03 109 aa15.53■□□□□ 0.08
CCDC9-201ENST00000221922 CHCHD5Q9BSY4 110 aa15.53■□□□□ 0.08
CCDC9-201ENST00000221922 TENM1Q9UKZ4 2725 aa15.52■□□□□ 0.08
CCDC9-201ENST00000221922 MRPL23Q16540 153 aaKnown RBP15.52■□□□□ 0.08
CCDC9-201ENST00000221922 C15orf53Q8NAA6 179 aa15.52■□□□□ 0.07
CCDC9-201ENST00000221922 ANAPC13Q9BS18 74 aa15.52■□□□□ 0.07
CCDC9-201ENST00000221922 WFDC9Q8NEX5 89 aa15.5■□□□□ 0.07
CCDC9-201ENST00000221922 COX7B2Q8TF08 81 aa15.5■□□□□ 0.07
CCDC9-201ENST00000221922 TRACP01848 142 aa15.49■□□□□ 0.07
CCDC9-201ENST00000221922 LYRM9A8MSI8 78 aa15.48■□□□□ 0.07
CCDC9-201ENST00000221922 IGLV4-60A0A075B6I1 120 aa15.48■□□□□ 0.07
CCDC9-201ENST00000221922 GYPEP15421 78 aa15.48■□□□□ 0.07
CCDC9-201ENST00000221922 PRO0255Q9UI72 69 aa15.48■□□□□ 0.07
CCDC9-201ENST00000221922 WIPF1O43516 503 aa15.47■□□□□ 0.07
CCDC9-201ENST00000221922 APOC4P55056 127 aa15.47■□□□□ 0.07
CCDC9-201ENST00000221922 NHLRC4P0CG21 123 aaPredicted RBP15.47■□□□□ 0.07
CCDC9-201ENST00000221922 FAM222AQ5U5X8 452 aa15.46■□□□□ 0.07
CCDC9-201ENST00000221922 TEP1Q99973 2627 aaKnown RBP15.46■□□□□ 0.07
CCDC9-201ENST00000221922 TRAV13-2A0A0B4J235 113 aa15.45■□□□□ 0.06
CCDC9-201ENST00000221922 IGHV3OR16-9A0A0B4J2B5 98 aa15.45■□□□□ 0.06
CCDC9-201ENST00000221922 NDUFV3P56181 108 aaKnown RBP15.45■□□□□ 0.06
CCDC9-201ENST00000221922 IGKV3OR2-268A0A0C4DH90 116 aa15.44■□□□□ 0.06
CCDC9-201ENST00000221922 MIR7-3HGQ8N6C7 128 aa15.44■□□□□ 0.06
CCDC9-201ENST00000221922 ATRQ13535 2644 aa15.43■□□□□ 0.06
CCDC9-201ENST00000221922 RPL28P46779 137 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms