RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 F8P00451 2351 aa10.83□□□□□ -0.68
EFNB1-201ENST00000204961 BRI3O95415 125 aa10.83□□□□□ -0.68
EFNB1-201ENST00000204961 Q9HAA7 133 aa10.83□□□□□ -0.68
EFNB1-201ENST00000204961 OTOGQ6ZRI0 2925 aa10.82□□□□□ -0.68
EFNB1-201ENST00000204961 MRPS36P82909 103 aaKnown RBP10.82□□□□□ -0.68
EFNB1-201ENST00000204961 RPL36AP83881 106 aaKnown RBP10.82□□□□□ -0.68
EFNB1-201ENST00000204961 RPL36ALQ969Q0 106 aaKnown RBP10.82□□□□□ -0.68
EFNB1-201ENST00000204961 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.82□□□□□ -0.68
EFNB1-201ENST00000204961 COX6CP09669 75 aa10.82□□□□□ -0.68
EFNB1-201ENST00000204961 RPL32P62910 135 aaKnown RBP10.82□□□□□ -0.68
EFNB1-201ENST00000204961 NOTCH1P46531 2555 aa10.82□□□□□ -0.68
EFNB1-201ENST00000204961 NTM-AS1Q6ZSK4 140 aa10.81□□□□□ -0.68
EFNB1-201ENST00000204961 SBSPONQ8IVN8 264 aa10.81□□□□□ -0.68
EFNB1-201ENST00000204961 ODF3Q96PU9 254 aa10.81□□□□□ -0.68
EFNB1-201ENST00000204961 LITAFQ99732 161 aa10.81□□□□□ -0.68
EFNB1-201ENST00000204961 LINC00242Q5T6M2 205 aa10.81□□□□□ -0.68
EFNB1-201ENST00000204961 ZNF843Q8N446 348 aa10.81□□□□□ -0.68
EFNB1-201ENST00000204961 NBEAL1Q6ZS30 2694 aa10.81□□□□□ -0.68
EFNB1-201ENST00000204961 OR13C6PQ8NH95 151 aa10.8□□□□□ -0.68
EFNB1-201ENST00000204961 LINC00158P58513 81 aa10.79□□□□□ -0.68
EFNB1-201ENST00000204961 MRPL23Q16540 153 aaKnown RBP10.79□□□□□ -0.68
EFNB1-201ENST00000204961 RNASE1P07998 156 aaKnown RBP10.79□□□□□ -0.68
EFNB1-201ENST00000204961 CIRBPQ14011 172 aaKnown RBP10.79□□□□□ -0.68
EFNB1-201ENST00000204961 MIAQ16674 131 aa10.79□□□□□ -0.68
EFNB1-201ENST00000204961 H7C423 109 aa10.78□□□□□ -0.68
EFNB1-201ENST00000204961 TRBV10-2A0A0K0K1G8 114 aa10.78□□□□□ -0.68
EFNB1-201ENST00000204961 J3QLI3 93 aa10.78□□□□□ -0.68
EFNB1-201ENST00000204961 HTN3P15516 51 aa10.78□□□□□ -0.68
EFNB1-201ENST00000204961 C4orf3Q8WVX3 66 aa10.78□□□□□ -0.68
EFNB1-201ENST00000204961 IGLV10-54A0A075B6I4 117 aa10.78□□□□□ -0.68
EFNB1-201ENST00000204961 SOSTDC1Q6X4U4 206 aa10.78□□□□□ -0.68
EFNB1-201ENST00000204961 PKD1L1Q8TDX9 2849 aa10.78□□□□□ -0.68
EFNB1-201ENST00000204961 TINCRA0A1B0GVN0 87 aa10.77□□□□□ -0.69
EFNB1-201ENST00000204961 ATP5G1P05496 136 aa10.77□□□□□ -0.69
EFNB1-201ENST00000204961 A0A0B4J2C4 111 aa10.76□□□□□ -0.69
EFNB1-201ENST00000204961 SPANXA1Q9NS26 97 aa10.76□□□□□ -0.69
EFNB1-201ENST00000204961 IGLV4-60A0A075B6I1 120 aa10.76□□□□□ -0.69
EFNB1-201ENST00000204961 XCL1P47992 114 aa10.76□□□□□ -0.69
EFNB1-201ENST00000204961 TRRAPQ9Y4A5 3859 aa10.75□□□□□ -0.69
EFNB1-201ENST00000204961 K7EQD1 137 aa10.75□□□□□ -0.69
EFNB1-201ENST00000204961 LINC00482Q8N8I6 264 aa10.75□□□□□ -0.69
EFNB1-201ENST00000204961 LINC00308Q8TCZ7 52 aa10.75□□□□□ -0.69
EFNB1-201ENST00000204961 PPDPFQ9H3Y8 114 aa10.75□□□□□ -0.69
EFNB1-201ENST00000204961 PYGO1Q9Y3Y4 419 aa10.74□□□□□ -0.69
EFNB1-201ENST00000204961 STAB1Q9NY15 2570 aa10.74□□□□□ -0.69
EFNB1-201ENST00000204961 LINC00526Q96FQ7 95 aa10.74□□□□□ -0.69
EFNB1-201ENST00000204961 MIR7-3HGQ8N6C7 128 aa10.73□□□□□ -0.69
EFNB1-201ENST00000204961 Q8N3U1 123 aa10.73□□□□□ -0.69
EFNB1-201ENST00000204961 MAST4O15021 2626 aa10.73□□□□□ -0.69
EFNB1-201ENST00000204961 FAM236AA0A1B0GUQ0 79 aa10.73□□□□□ -0.69
EFNB1-201ENST00000204961 FAM236BA0A1B0GV22 79 aa10.73□□□□□ -0.69
EFNB1-201ENST00000204961 SMIM1B2RUZ4 78 aa10.73□□□□□ -0.69
EFNB1-201ENST00000204961 SLPIP03973 132 aa10.72□□□□□ -0.69
EFNB1-201ENST00000204961 PRR3P79522 188 aaKnown RBP10.72□□□□□ -0.69
EFNB1-201ENST00000204961 LINC01006Q8NI28 216 aa10.72□□□□□ -0.69
EFNB1-201ENST00000204961 TMEM243Q9BU79 118 aa10.72□□□□□ -0.69
EFNB1-201ENST00000204961 PAX4O43316 350 aa10.71□□□□□ -0.69
EFNB1-201ENST00000204961 TRBV30A0A0K0K1B3 111 aa10.7□□□□□ -0.7
EFNB1-201ENST00000204961 HERVK_113P63121 156 aa10.7□□□□□ -0.7
EFNB1-201ENST00000204961 SPATA3Q8NHX4 192 aa10.7□□□□□ -0.7
EFNB1-201ENST00000204961 M0QXV9 152 aa10.69□□□□□ -0.7
EFNB1-201ENST00000204961 FBN1P35555 2871 aaKnown RBP10.69□□□□□ -0.7
EFNB1-201ENST00000204961 LOC107984640A0A0U1RRK4 108 aa10.69□□□□□ -0.7
EFNB1-201ENST00000204961 FAM218AQ96MZ4 157 aa10.69□□□□□ -0.7
EFNB1-201ENST00000204961 CDC42SE2Q9NRR3 84 aa10.69□□□□□ -0.7
EFNB1-201ENST00000204961 PF4P02776 101 aa10.68□□□□□ -0.7
EFNB1-201ENST00000204961 KLK5Q9Y337 293 aaPredicted RBP10.68□□□□□ -0.7
EFNB1-201ENST00000204961 GAGE2AQ6NT46 116 aa10.68□□□□□ -0.7
EFNB1-201ENST00000204961 FSHBP01225 129 aa10.67□□□□□ -0.7
EFNB1-201ENST00000204961 NDUFA1O15239 70 aa10.67□□□□□ -0.7
EFNB1-201ENST00000204961 GIG44P09565 113 aaPredicted RBP10.66□□□□□ -0.7
EFNB1-201ENST00000204961 BAALC-AS2P0C853 105 aa10.66□□□□□ -0.7
EFNB1-201ENST00000204961 C6orf226Q5I0X4 101 aa10.66□□□□□ -0.7
EFNB1-201ENST00000204961 DNAJC30Q96LL9 226 aa10.66□□□□□ -0.7
EFNB1-201ENST00000204961 GYPEP15421 78 aa10.66□□□□□ -0.7
EFNB1-201ENST00000204961 DAZ2Q13117 558 aaKnown RBP10.65□□□□□ -0.7
EFNB1-201ENST00000204961 BEAN1Q3B7T3 259 aa10.65□□□□□ -0.7
EFNB1-201ENST00000204961 DAZ4Q86SG3 579 aaKnown RBP10.65□□□□□ -0.7
EFNB1-201ENST00000204961 SPANXDQ9BXN6 97 aa10.65□□□□□ -0.7
EFNB1-201ENST00000204961 SND1-IT1Q9HBX3 110 aa10.65□□□□□ -0.7
EFNB1-201ENST00000204961 DAZ3Q9NR90 486 aaKnown RBP10.65□□□□□ -0.7
EFNB1-201ENST00000204961 SPANXCQ9NY87 97 aa10.65□□□□□ -0.7
EFNB1-201ENST00000204961 LST1O00453 97 aa10.65□□□□□ -0.7
EFNB1-201ENST00000204961 DEFB135Q30KP9 77 aa10.64□□□□□ -0.71
EFNB1-201ENST00000204961 C9orf116Q5BN46 136 aaPredicted RBP10.64□□□□□ -0.71
EFNB1-201ENST00000204961 KRTAP1-3Q8IUG1 177 aa10.64□□□□□ -0.71
EFNB1-201ENST00000204961 COL6A5A8TX70 2615 aa10.64□□□□□ -0.71
EFNB1-201ENST00000204961 CRPP02741 224 aa10.64□□□□□ -0.71
EFNB1-201ENST00000204961 H3BT86 120 aa10.63□□□□□ -0.71
EFNB1-201ENST00000204961 C9orf153Q5TBE3 101 aa10.63□□□□□ -0.71
EFNB1-201ENST00000204961 RNF152Q8N8N0 203 aa10.63□□□□□ -0.71
EFNB1-201ENST00000204961 BAHCC1Q9P281 2608 aa10.63□□□□□ -0.71
EFNB1-201ENST00000204961 LINC00337Q8N6G1 96 aa10.63□□□□□ -0.71
EFNB1-201ENST00000204961 COX7B2Q8TF08 81 aa10.63□□□□□ -0.71
EFNB1-201ENST00000204961 FAM110AQ9BQ89 295 aa10.63□□□□□ -0.71
EFNB1-201ENST00000204961 TIRAPP58753 221 aa10.62□□□□□ -0.71
EFNB1-201ENST00000204961 C9orf129Q5T035 196 aaKnown RBP10.62□□□□□ -0.71
EFNB1-201ENST00000204961 NSD1Q96L73 2696 aaPredicted RBP10.61□□□□□ -0.71
EFNB1-201ENST00000204961 SMCR5Q8TEV8 140 aa10.61□□□□□ -0.71
EFNB1-201ENST00000204961 C14orf132Q9NPU4 83 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms