RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Vmn1r119E9Q4H3 307 aa7.94□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Gm10020E9QAZ2 204 aa7.94□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Gm5426J3QNM7 103 aa7.94□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 P01759 136 aa7.94□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Gimap1P70224 277 aa7.94□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Mbnl2Q8C181 373 aaKnown RBP7.94□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Siglec12Q91Y57 467 aa7.94□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Rpl15Q9CZM2 204 aaKnown RBP7.94□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 AplnrQ9WV08 377 aa7.94□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 P04946 108 aa7.93□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Gm10645Q3UPY1 145 aa7.93□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Znf641Q8BZ34 422 aa7.93□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Gm5093E9PZB3 174 aa7.93□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Olfr715bE9Q725 315 aa7.93□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Dkk1O54908 272 aa7.93□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Slc25a48Q8BW66 306 aa7.93□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Pear1Q8VIK5 1034 aa7.93□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Rif1Q6PR54 2419 aaKnown RBP7.93□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 TracA0A075B662 137 aa7.93□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 P18532 116 aa7.93□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Prrx1P63013 245 aa7.93□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Fam168aQ8BGZ2 244 aa7.93□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Rpp25lQ99JH1 163 aa7.93□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Fam162bQ9CX19 157 aa7.93□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Fancd2osQ9D4K4 178 aa7.93□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Tmprss5Q9ER04 455 aa7.93□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Trav9-1A0A075B601 112 aa7.92□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Gm6970F7DCP6 221 aa7.92□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Fam213bQ9DB60 201 aa7.92□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 P01792 123 aa7.92□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 OstcQ78XF5 149 aa7.92□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Habp2Q8K0D2 558 aa7.92□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Uqcc3Q8K2T4 89 aa7.92□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 CstadQ9D245 104 aa7.92□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Dopey1Q8BL99 2399 aa7.92□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Ighv5-9A0A075B5Q2 117 aa7.92□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Ins1P01325 108 aa7.92□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Jpt2Q6PGH2 190 aaKnown RBP7.92□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Rhbdd1Q8BHC7 315 aa7.92□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Il25Q8VHH8 169 aa7.92□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 3100002H09RikQ9CXW6 140 aa7.92□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Plpp2Q9DAX2 276 aa7.92□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Itpr1P11881 2749 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Ighv5-12-4A0A0A6YWG4 117 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Ighv9-1A0A0B4J1P3 117 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Rhox7bA6PW38 321 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 P03980 138 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Hoxb2P0C1T1 354 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Cox6a1P43024 111 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Zcwpw2Q08EN7 125 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Rgs13Q8K443 158 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Mapk1ip1Q9D7G9 263 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Trbv13-3A0A0B4J1H2 113 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Esp38A8R0X1 80 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Olfr1185-ps1F6XP16 303 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 SelenotP62342 195 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 AmelxP63277 210 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 EpopQ7TNS8 369 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Smim19Q80ZU4 107 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Tmem167aQ9CR64 72 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Q9D8L0 127 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Olfr954Q9EQB6 314 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Gm765B2RVL9 189 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Defa30E9QPZ2 93 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 BokO35425 213 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Olfr877Q8VF62 311 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Olfr1012Q8VFJ7 311 aa7.91□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Arhgef17Q80U35 2057 aa7.9□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 D930048N14RikA2AA67 225 aa7.9□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Gm9920D3YVZ2 140 aa7.9□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Tm4sf19E9Q9H8 206 aa7.9□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Plxdc1Q91ZV7 500 aa7.9□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 KalrnA2CG49 2964 aa7.9□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Cspg4Q8VHY0 2327 aa7.9□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Defa35E9QLQ1 93 aa7.9□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 IappP12968 93 aa7.9□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Arf6P62331 175 aa7.9□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Higd1cQ76I25 96 aa7.9□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Olfr1437Q7TQR7 312 aa7.9□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Olfr1419Q7TQS2 343 aa7.9□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Ndufs8Q8K3J1 212 aa7.9□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Olfr1243Q8VGM7 305 aa7.9□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Mien1Q9CQ86 115 aa7.9□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 ChtopQ9CY57 249 aaKnown RBP7.9□□□□□ -1.14
Pcdh1-201ENSMUST00000057185 Trav7n-4A0A075B620 113 aa7.9□□□□□ -1.15
Pcdh1-201ENSMUST00000057185 Gm21913J3KML9 361 aa7.9□□□□□ -1.15
Pcdh1-201ENSMUST00000057185 Gm21776J3QPJ5 361 aa7.9□□□□□ -1.15
Pcdh1-201ENSMUST00000057185 Ypel3P61237 119 aa7.9□□□□□ -1.15
Pcdh1-201ENSMUST00000057185 Olfr16Q62007 309 aa7.9□□□□□ -1.15
Pcdh1-201ENSMUST00000057185 Hif1anQ8BLR9 349 aa7.9□□□□□ -1.15
Pcdh1-201ENSMUST00000057185 Tmem189Q99LQ7 271 aa7.9□□□□□ -1.15
Pcdh1-201ENSMUST00000057185 Ceacam15A0A0B4J1L0 234 aa7.89□□□□□ -1.15
Pcdh1-201ENSMUST00000057185 Trav23A0A0G2JG17 115 aa7.89□□□□□ -1.15
Pcdh1-201ENSMUST00000057185 Olfr1192-ps1A0A1L1SRD7 309 aa7.89□□□□□ -1.15
Pcdh1-201ENSMUST00000057185 Olfr218E9PWV2 313 aa7.89□□□□□ -1.15
Pcdh1-201ENSMUST00000057185 Ccdc71lE9Q4T4 218 aa7.89□□□□□ -1.15
Pcdh1-201ENSMUST00000057185 RbpjP31266 526 aa7.89□□□□□ -1.15
Pcdh1-201ENSMUST00000057185 Znf691Q3TDE8 283 aa7.89□□□□□ -1.15
Pcdh1-201ENSMUST00000057185 Trappc1Q5NCF2 145 aa7.89□□□□□ -1.15
Pcdh1-201ENSMUST00000057185 Tmem140Q8BGY5 185 aa7.89□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms