RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Rpl23P62830 140 aaKnown RBP9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Tpsab1Q02844 273 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Rnf166Q3U9F6 237 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Olfr1441Q8VFV3 318 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 GrhprQ91Z53 328 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Gm28372A0A087WNV0 220 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Igkv14-130A0A0G2JF45 117 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Ube2e1P52482 193 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Prima1Q810F0 153 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Tmem160Q9D938 188 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Asxl3Q8C4A5 2259 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Wdr90Q6ZPG2 1874 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 PtprsB0V2N1 1907 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Cfap46E9Q2C0 2641 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Gm37388A0A0A6YY46 143 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Fam240aJ3QNP9 97 aa9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Hnrnpa3Q8BG05 379 aaKnown RBP9.64□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Ighv1-18A0A0A6YXN4 117 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Gm10020E9QAZ2 204 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Cela2aP05208 271 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Sh3bgrl3Q91VW3 93 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Rpl15Q9CZM2 204 aaKnown RBP9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 CstadQ9D245 104 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Dennd4cA6H8H2 1906 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Tcf21O35437 179 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Il3raP26952 396 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 9930022D16RikQ8BG27 128 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Slc16a4Q8R0M8 500 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Atp6v0e1Q9CQD8 81 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Trav6n-5A0A075B621 112 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Trav6-5A0A075B6B5 112 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Wisp3D3Z5L9 354 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 LgalslbQ7TPX9 165 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Med13Q5SWW4 2171 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Cypt3B1AY64 174 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Ca5aP23589 299 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Nutf2P61971 127 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Khdc1cQ4KL78 166 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Foxf1Q61080 378 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Znf641Q8BZ34 422 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Avpi1Q9D7H4 142 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 LenepQ9WVB6 61 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 TdhQ8K3F7 373 aa9.63□□□□□ -0.87
Pcif1-201ENSMUST00000041643 AmelxP63277 210 aa9.62□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Ceacam15A0A0B4J1L0 234 aa9.62□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Gm37988J3QM41 62 aa9.62□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Gm10306Q9CUK2 115 aa9.62□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Gm29666A0A087WQ99 126 aa9.62□□□□□ -0.87
Pcif1-201ENSMUST00000041643 P01724 129 aa9.62□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Tmem97Q8VD00 176 aa9.62□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Leprotl1Q9CQ74 131 aa9.62□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Tcrg-V6A0A075B5Y8 134 aa9.62□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Ccl21aP84444 133 aa9.62□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Ccl21bP86792 133 aa9.62□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Ccl21cP86793 133 aa9.62□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Vmn1r70Q8R254 298 aa9.62□□□□□ -0.87
Pcif1-201ENSMUST00000041643 NmbQ9CR53 121 aa9.62□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Cxcl14Q9WUQ5 99 aa9.62□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Trbv12-2A0A0B4J1H1 124 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Vmn1r119E9Q4H3 307 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 CntfrO88507 372 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Ighv3-6P18531 116 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Klhdc1Q80YG3 406 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Ceacam11Q9D0Z8 303 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Vmn1r54Q9EPB8 315 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 LitafQ9JLJ0 161 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Trav16nA0A075B634 117 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Ighv1-69A0A0G2JFS5 117 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Gm6871L7N248 545 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Fgf5P15656 264 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Cox6b1P56391 86 aaKnown RBP9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Foxc2Q61850 494 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Fam110aQ8R184 296 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Olfr1195Q8VG21 308 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Olfr1295Q8VF48 312 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Pam16Q9CQV1 125 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 ChtopQ9CY57 249 aaKnown RBP9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Hcfc2Q9D968 241 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Josd1Q9DBJ6 202 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 GlrxQ9QUH0 107 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Crybg1A0A0G2JG52 2065 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Saxo2Q8BQB6 394 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 3110018I06RikQ9CXS0 120 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Slc25a39Q9D8K8 359 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Fhl3Q9R059 289 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Trav7-4A0A075B6C1 113 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Hist1h1tQ07133 208 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Trav7d-4Q5R1H9 113 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Uqcc3Q8K2T4 89 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Dkk4Q8VEJ3 221 aa9.61□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Defb26Q30KN7 186 aa9.6□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Olfr211Q8VGH2 309 aa9.6□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Klk4Q9Z0M1 255 aa9.6□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Shank1D3YZU1 2167 aa9.6□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Pygo1Q9D0P5 417 aa9.6□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Cnn3Q9DAW9 330 aaKnown RBP9.6□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Susd2Q9DBX3 820 aa9.6□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Trav9-1A0A075B601 112 aa9.6□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Olfr748E9Q9Z0 307 aa9.6□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Slc25a2Q99ML6 265 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 58.3 ms