RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Vmn1r46Q9EQ45 309 aa11.3□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Trav9-1A0A075B601 112 aa11.29□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Gm6525A0A0A6YW33 106 aa11.29□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Olfr1326-ps1A0A140T8J7 311 aa11.29□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Olfr912A0A1L1SSS5 310 aa11.29□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Vmn1r160E9Q346 307 aa11.29□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Krtap24-1G3X9A2 248 aa11.29□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Vmn1r123L7N270 307 aa11.29□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Efnb3O35393 340 aa11.29□□□□□ -0.6
Ercc1-201ENSMUST00000003645 CrygbP04344 175 aa11.29□□□□□ -0.6
Ercc1-201ENSMUST00000003645 P0C1Z5 52 aa11.29□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Rom1P32958 351 aa11.29□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Slc2a9Q3T9X0 538 aa11.29□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Ang2Q64438 145 aa11.29□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Olfr972Q9EQA2 314 aa11.29□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Bin3Q9JI08 253 aa11.29□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Igfn1Q3KNY0 2849 aa11.29□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Pglyrp3A1A547 347 aa11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Olfr282A1L1B4 308 aa11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 AipO08915 330 aa11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Zfp36l1P23950 338 aa11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Tmem18Q3TUD9 140 aa11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Olfr1173Q7TR24 312 aa11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Q8BN57 294 aa11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Rnf183Q8QZS5 190 aa11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Olfr1394Q8VET2 312 aa11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Chd9Q8BYH8 2885 aa11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Trav6-4A0A075B6B4 115 aa11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Gm20532G3UXR8 106 aa11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Olfr15P23275 312 aa11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Ccl6P27784 116 aa11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 PcnpQ6P8I4 178 aaKnown RBP11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Olfr1386Q7TQT0 309 aa11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 SpartQ8R1X6 671 aa11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Olfr1243Q8VGM7 305 aa11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Chrdl1Q920C1 447 aa11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Mcrip2Q9CQB2 160 aaKnown RBP11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Oxld1Q9CR10 201 aa11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 UrahQ9CRB3 118 aa11.28□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Gm12886B1AZM5 119 aa11.27□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Olfr748E9Q9Z0 307 aa11.27□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Gm6871L7N248 545 aa11.27□□□□□ -0.61
Ercc1-201ENSMUST00000003645 MsmbO08540 113 aa11.27□□□□□ -0.61
Ercc1-201ENSMUST00000003645 F7P70375 446 aa11.27□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Gm12689Q8BQU9 117 aa11.27□□□□□ -0.61
Ercc1-201ENSMUST00000003645 9430097D07RikQ8BS47 195 aa11.27□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Dusp18Q8VE01 188 aa11.27□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Olfr860Q8VFF7 317 aa11.27□□□□□ -0.61
Ercc1-201ENSMUST00000003645 PigpQ9JHG1 132 aa11.27□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Gng13Q9JMF3 67 aa11.27□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Pfdn5Q9WU28 154 aa11.27□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Nav3Q80TN7 2359 aa11.27□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Ighv12-3A0A075B5T1 117 aa11.26□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Ighv1-39A0A075B5V5 117 aa11.26□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Igkv1-132A0A0B4J1H9 120 aa11.26□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Gm10638F6QEG2 257 aa11.26□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Gm933J3QPC1 141 aa11.26□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Fut9O88819 359 aa11.26□□□□□ -0.61
Ercc1-201ENSMUST00000003645 RhobP62746 196 aa11.26□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Fam78bQ8BQN5 261 aa11.26□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Eda2rQ8BX35 297 aa11.26□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Defb10Q8R2I8 73 aa11.26□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Rnf2Q9CQJ4 336 aa11.26□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Slc25a39Q9D8K8 359 aa11.26□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Tomm40Q9QYA2 361 aa11.26□□□□□ -0.61
Ercc1-201ENSMUST00000003645 BC053393A0A0B4J1F6 192 aa11.25□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Ighv5-16A0A0B4J1P4 117 aa11.25□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Ctxnd1A0A1B0GST9 59 aa11.25□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Zfp971A2BFG8 470 aa11.25□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Gm14288E9Q9W0 88 aa11.25□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Gm17669F6QL70 154 aa11.25□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Fgf4P11403 202 aa11.25□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Crip1P63254 77 aa11.25□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Obox7Q4KL20 218 aa11.25□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Fam222aQ6PGH4 453 aa11.25□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Olfr1472Q7TQQ9 314 aa11.25□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Olfr1026Q7TR90 307 aa11.25□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Olfr43Q7TRX1 313 aa11.25□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Pygo2Q80V76 405 aa11.25□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Tsen54Q8C2A2 525 aa11.25□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Cdc34Q8CFI2 235 aa11.25□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Ido2Q8R0V5 405 aa11.25□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Rpp25lQ99JH1 163 aa11.25□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Ucn2Q99ML8 113 aa11.25□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Eif3gQ9Z1D1 320 aaKnown RBP11.25□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Fn1P11276 2477 aaKnown RBP11.24□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Tmsb15aA2AEH9 79 aa11.24□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Mettl8A2AUU0 281 aa11.24□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Gm10036E9PYL9 178 aaKnown RBP11.24□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Ang6Q5GAN0 147 aa11.24□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Trav8d-1Q5R1H8 112 aa11.24□□□□□ -0.61
Ercc1-201ENSMUST00000003645 HaaoQ78JT3 286 aa11.24□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Rab14Q91V41 215 aaKnown RBP11.24□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Spcs1Q9D958 161 aa11.24□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Setd2E9Q5F9 2537 aa11.24□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Itpr2Q9Z329 2701 aa11.23□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Olfr1293-psA0A1L1SVB5 326 aa11.23□□□□□ -0.61
Ercc1-201ENSMUST00000003645 LhbO09108 141 aa11.23□□□□□ -0.61
Ercc1-201ENSMUST00000003645 Tnfrsf9P20334 256 aa11.23□□□□□ -0.61
Ercc1-201ENSMUST00000003645 1700057G04RikQ3V0U0 232 aa11.23□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms