RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 TRAV13-1A0A0B4J241 112 aa11.49□□□□□ -0.57
LINC02228-204ENST00000642115 HIST1H4AP62805 103 aaKnown RBP11.49□□□□□ -0.57
LINC02228-204ENST00000642115 MRPS36P82909 103 aaKnown RBP11.49□□□□□ -0.57
LINC02228-204ENST00000642115 VSIG2Q96IQ7 327 aa11.49□□□□□ -0.57
LINC02228-204ENST00000642115 USP9XQ93008 2570 aaPredicted RBP11.48□□□□□ -0.57
LINC02228-204ENST00000642115 BAALC-AS2P0C853 105 aa11.48□□□□□ -0.57
LINC02228-204ENST00000642115 IGHV4-61A0A0C4DH41 118 aa11.48□□□□□ -0.57
LINC02228-204ENST00000642115 ATOX1O00244 68 aa11.48□□□□□ -0.57
LINC02228-204ENST00000642115 KLRB1Q12918 225 aa11.48□□□□□ -0.57
LINC02228-204ENST00000642115 IGHV1OR15-1A0A075B7D0 117 aa11.47□□□□□ -0.57
LINC02228-204ENST00000642115 COX7A2LO14548 114 aa11.47□□□□□ -0.57
LINC02228-204ENST00000642115 Q8N2B8 174 aa11.47□□□□□ -0.57
LINC02228-204ENST00000642115 ZFYVE26Q68DK2 2539 aa11.47□□□□□ -0.57
LINC02228-204ENST00000642115 IGHV3-38A0A0C4DH36 116 aa11.46□□□□□ -0.57
LINC02228-204ENST00000642115 IGHG2P01859 326 aa11.46□□□□□ -0.57
LINC02228-204ENST00000642115 SNRPD3P62318 126 aaKnown RBP11.46□□□□□ -0.57
LINC02228-204ENST00000642115 HRCT1Q6UXD1 115 aa11.46□□□□□ -0.57
LINC02228-204ENST00000642115 ZNF625Q96I27 306 aaPredicted RBP11.46□□□□□ -0.57
LINC02228-204ENST00000642115 SETD2Q9BYW2 2564 aaPredicted RBP11.46□□□□□ -0.58
LINC02228-204ENST00000642115 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.45□□□□□ -0.58
LINC02228-204ENST00000642115 IGKV2-29A2NJV5 120 aaPredicted RBP11.45□□□□□ -0.58
LINC02228-204ENST00000642115 SYNJ2BPP57105 145 aa11.45□□□□□ -0.58
LINC02228-204ENST00000642115 C9orf85Q96MD7 179 aa11.45□□□□□ -0.58
LINC02228-204ENST00000642115 ZANQ9Y493 2812 aa11.45□□□□□ -0.58
LINC02228-204ENST00000642115 BEAN1Q3B7T3 259 aa11.45□□□□□ -0.58
LINC02228-204ENST00000642115 WNK1Q9H4A3 2382 aa11.45□□□□□ -0.58
LINC02228-204ENST00000642115 PKD1L2Q7Z442 2459 aa11.44□□□□□ -0.58
LINC02228-204ENST00000642115 F5H768 121 aa11.44□□□□□ -0.58
LINC02228-204ENST00000642115 C19orf84I3L1E1 186 aa11.44□□□□□ -0.58
LINC02228-204ENST00000642115 ACACBO00763 2458 aa11.44□□□□□ -0.58
LINC02228-204ENST00000642115 RPL18AQ02543 176 aaKnown RBP11.43□□□□□ -0.58
LINC02228-204ENST00000642115 FAM218AQ96MZ4 157 aa11.43□□□□□ -0.58
LINC02228-204ENST00000642115 TLN2Q9Y4G6 2542 aa11.43□□□□□ -0.58
LINC02228-204ENST00000642115 TMEM258P61165 79 aa11.43□□□□□ -0.58
LINC02228-204ENST00000642115 RNF152Q8N8N0 203 aa11.43□□□□□ -0.58
LINC02228-204ENST00000642115 IGKV3D-7A0A0C4DH55 119 aa11.42□□□□□ -0.58
LINC02228-204ENST00000642115 CACNA1AO00555 2505 aa11.42□□□□□ -0.58
LINC02228-204ENST00000642115 Q5XG85 94 aa11.42□□□□□ -0.58
LINC02228-204ENST00000642115 LINC00308Q8TCZ7 52 aa11.42□□□□□ -0.58
LINC02228-204ENST00000642115 UPK3BQ9BT76 320 aa11.42□□□□□ -0.58
LINC02228-204ENST00000642115 A0A087WVE0 104 aa11.41□□□□□ -0.58
LINC02228-204ENST00000642115 Q9HAA7 133 aa11.41□□□□□ -0.58
LINC02228-204ENST00000642115 A6NDX4 124 aa11.4□□□□□ -0.58
LINC02228-204ENST00000642115 TIMM17BO60830 172 aa11.4□□□□□ -0.58
LINC02228-204ENST00000642115 PYGO1Q9Y3Y4 419 aa11.4□□□□□ -0.58
LINC02228-204ENST00000642115 PTPN13Q12923 2485 aa11.39□□□□□ -0.59
LINC02228-204ENST00000642115 TINCRA0A1B0GVN0 87 aa11.39□□□□□ -0.59
LINC02228-204ENST00000642115 SERP2Q8N6R1 65 aa11.39□□□□□ -0.59
LINC02228-204ENST00000642115 IGLV1-40P01703 118 aa11.39□□□□□ -0.59
LINC02228-204ENST00000642115 SOSTDC1Q6X4U4 206 aa11.39□□□□□ -0.59
LINC02228-204ENST00000642115 FAM208BQ5VWN6 2430 aa11.38□□□□□ -0.59
LINC02228-204ENST00000642115 RBMY1A1P0DJD3 496 aaKnown RBP11.38□□□□□ -0.59
LINC02228-204ENST00000642115 RBMY1CP0DJD4 496 aa11.38□□□□□ -0.59
LINC02228-204ENST00000642115 RBMY1FQ15415 496 aaKnown RBP11.38□□□□□ -0.59
LINC02228-204ENST00000642115 Q6ZSN1 163 aa11.38□□□□□ -0.59
LINC02228-204ENST00000642115 CDKN2A-AS1Q9UH64 79 aa11.38□□□□□ -0.59
LINC02228-204ENST00000642115 AVPP01185 164 aa11.38□□□□□ -0.59
LINC02228-204ENST00000642115 IGHV4-59P01825 116 aa11.38□□□□□ -0.59
LINC02228-204ENST00000642115 INAFM2P0DMQ5 153 aa11.38□□□□□ -0.59
LINC02228-204ENST00000642115 HIST2H2BDQ6DRA6 164 aa11.38□□□□□ -0.59
LINC02228-204ENST00000642115 UTP20O75691 2785 aaKnown RBP11.38□□□□□ -0.59
LINC02228-204ENST00000642115 HOXD3P31249 432 aaPredicted RBP11.37□□□□□ -0.59
LINC02228-204ENST00000642115 PIMREGQ9BSJ6 248 aa11.37□□□□□ -0.59
LINC02228-204ENST00000642115 CFAP46Q8IYW2 2715 aa11.37□□□□□ -0.59
LINC02228-204ENST00000642115 H3BUA1 57 aa11.37□□□□□ -0.59
LINC02228-204ENST00000642115 C9orf129Q5T035 196 aaKnown RBP11.37□□□□□ -0.59
LINC02228-204ENST00000642115 DGAT2L7PQ6IED9 249 aa11.37□□□□□ -0.59
LINC02228-204ENST00000642115 FLNCQ14315 2725 aa11.37□□□□□ -0.59
LINC02228-204ENST00000642115 IGHV4-30-2A0A087WSY4 118 aa11.36□□□□□ -0.59
LINC02228-204ENST00000642115 K7EMT4 169 aa11.36□□□□□ -0.59
LINC02228-204ENST00000642115 K7EQG2 157 aa11.36□□□□□ -0.59
LINC02228-204ENST00000642115 CIRBPQ14011 172 aaKnown RBP11.36□□□□□ -0.59
LINC02228-204ENST00000642115 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.36□□□□□ -0.59
LINC02228-204ENST00000642115 NDUFA1O15239 70 aa11.36□□□□□ -0.59
LINC02228-204ENST00000642115 DEFB131AP59861 70 aa11.36□□□□□ -0.59
LINC02228-204ENST00000642115 Q9H8V8 135 aa11.36□□□□□ -0.59
LINC02228-204ENST00000642115 MYO18BQ8IUG5 2567 aa11.36□□□□□ -0.59
LINC02228-204ENST00000642115 MALP21145 153 aa11.35□□□□□ -0.59
LINC02228-204ENST00000642115 DEFB136Q30KP8 78 aa11.35□□□□□ -0.59
LINC02228-204ENST00000642115 LINC01561Q8N1V8 128 aa11.35□□□□□ -0.59
LINC02228-204ENST00000642115 LINC00467Q9BRT7 94 aa11.35□□□□□ -0.59
LINC02228-204ENST00000642115 JMJD1CQ15652 2540 aa11.35□□□□□ -0.59
LINC02228-204ENST00000642115 FAM222AQ5U5X8 452 aa11.35□□□□□ -0.59
LINC02228-204ENST00000642115 MAPK1IP1LQ8NDC0 245 aa11.35□□□□□ -0.59
LINC02228-204ENST00000642115 PRIMA1Q86XR5 153 aa11.34□□□□□ -0.59
LINC02228-204ENST00000642115 C10orf105Q8TEF2 133 aa11.34□□□□□ -0.59
LINC02228-204ENST00000642115 IGHV3OR16-12A0A075B7B8 117 aa11.34□□□□□ -0.59
LINC02228-204ENST00000642115 C14orf132Q9NPU4 83 aa11.34□□□□□ -0.59
LINC02228-204ENST00000642115 LINC00846Q9NV44 126 aa11.34□□□□□ -0.59
LINC02228-204ENST00000642115 SONP18583 2426 aaKnown RBP11.33□□□□□ -0.6
LINC02228-204ENST00000642115 USP17L23D6RBM5 183 aa11.33□□□□□ -0.6
LINC02228-204ENST00000642115 DNAL4O96015 105 aa11.33□□□□□ -0.6
LINC02228-204ENST00000642115 CCL19Q99731 98 aa11.33□□□□□ -0.6
LINC02228-204ENST00000642115 UBE2D4Q9Y2X8 147 aa11.33□□□□□ -0.6
LINC02228-204ENST00000642115 PSMB8P28062 276 aa11.32□□□□□ -0.6
LINC02228-204ENST00000642115 GNLYP22749 145 aa11.32□□□□□ -0.6
LINC02228-204ENST00000642115 MSMBP08118 114 aa11.31□□□□□ -0.6
LINC02228-204ENST00000642115 COX6A2Q02221 97 aa11.31□□□□□ -0.6
LINC02228-204ENST00000642115 FHL2Q14192 279 aa11.31□□□□□ -0.6
LINC02228-204ENST00000642115 DEFB112Q30KQ8 113 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms