RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 DAZ4Q86SG3 579 aaKnown RBP12.7□□□□□ -0.38
PHGDH-226ENST00000641756 SVIPQ8NHG7 77 aa12.7□□□□□ -0.38
PHGDH-226ENST00000641756 DAZ3Q9NR90 486 aaKnown RBP12.7□□□□□ -0.38
PHGDH-226ENST00000641756 TENM1Q9UKZ4 2725 aa12.69□□□□□ -0.38
PHGDH-226ENST00000641756 TRAV8-3A0A0A6YYJ7 113 aa12.68□□□□□ -0.38
PHGDH-226ENST00000641756 TRGV4A0A0C4DH28 118 aa12.68□□□□□ -0.38
PHGDH-226ENST00000641756 TINCRA0A1B0GVN0 87 aa12.68□□□□□ -0.38
PHGDH-226ENST00000641756 K7EP34 96 aa12.68□□□□□ -0.38
PHGDH-226ENST00000641756 CITED1Q99966 193 aa12.68□□□□□ -0.38
PHGDH-226ENST00000641756 GTF2H5Q6ZYL4 71 aa12.67□□□□□ -0.38
PHGDH-226ENST00000641756 TIMM21Q9BVV7 248 aa12.67□□□□□ -0.38
PHGDH-226ENST00000641756 SPCS1Q9Y6A9 102 aa12.67□□□□□ -0.38
PHGDH-226ENST00000641756 IGLL5B9A064 214 aa12.67□□□□□ -0.38
PHGDH-226ENST00000641756 IGHV3-30-3P0DP02 117 aa12.67□□□□□ -0.38
PHGDH-226ENST00000641756 FABP2P12104 132 aa12.67□□□□□ -0.38
PHGDH-226ENST00000641756 UBE2D1P51668 147 aa12.67□□□□□ -0.38
PHGDH-226ENST00000641756 OR5A1Q8NGJ0 315 aa12.67□□□□□ -0.38
PHGDH-226ENST00000641756 TRBV6-4A0A1B0GX49 114 aa12.66□□□□□ -0.38
PHGDH-226ENST00000641756 DEFB130BP0DP73 79 aa12.66□□□□□ -0.38
PHGDH-226ENST00000641756 DEFB130AP0DP74 79 aa12.66□□□□□ -0.38
PHGDH-226ENST00000641756 SPINK8P0C7L1 97 aa12.65□□□□□ -0.38
PHGDH-226ENST00000641756 FHL2Q14192 279 aa12.65□□□□□ -0.38
PHGDH-226ENST00000641756 A0A1B0GWB2 263 aa12.65□□□□□ -0.38
PHGDH-226ENST00000641756 GEMIN7Q9H840 131 aaKnown RBP12.65□□□□□ -0.38
PHGDH-226ENST00000641756 A8MZ25 164 aa12.64□□□□□ -0.39
PHGDH-226ENST00000641756 SBSPONQ8IVN8 264 aa12.64□□□□□ -0.39
PHGDH-226ENST00000641756 SPANXB1Q9NS25 103 aaPredicted RBP12.64□□□□□ -0.39
PHGDH-226ENST00000641756 X6R8D5 127 aa12.64□□□□□ -0.39
PHGDH-226ENST00000641756 IGHV1-58A0A0C4DH39 117 aa12.64□□□□□ -0.39
PHGDH-226ENST00000641756 IGHV3-30P01768 117 aa12.64□□□□□ -0.39
PHGDH-226ENST00000641756 IGHV3-30-5P0DP03 117 aa12.64□□□□□ -0.39
PHGDH-226ENST00000641756 C10orf126Q8N4M7 172 aa12.64□□□□□ -0.39
PHGDH-226ENST00000641756 CIDEAO60543 219 aa12.63□□□□□ -0.39
PHGDH-226ENST00000641756 TMEM238LA0A1B0GVL6 79 aa12.62□□□□□ -0.39
PHGDH-226ENST00000641756 A6NJY4 79 aa12.62□□□□□ -0.39
PHGDH-226ENST00000641756 CDKN2A-AS1Q9UH64 79 aa12.62□□□□□ -0.39
PHGDH-226ENST00000641756 COX6A2Q02221 97 aa12.62□□□□□ -0.39
PHGDH-226ENST00000641756 ATRQ13535 2644 aa12.62□□□□□ -0.39
PHGDH-226ENST00000641756 VSIG2Q96IQ7 327 aa12.61□□□□□ -0.39
PHGDH-226ENST00000641756 TMEM243Q9BU79 118 aa12.61□□□□□ -0.39
PHGDH-226ENST00000641756 GTSF1LQ9H1H1 148 aa12.61□□□□□ -0.39
PHGDH-226ENST00000641756 A0A0J9YXY3 114 aa12.61□□□□□ -0.39
PHGDH-226ENST00000641756 UBE2L6O14933 153 aa12.61□□□□□ -0.39
PHGDH-226ENST00000641756 APOMO95445 188 aa12.61□□□□□ -0.39
PHGDH-226ENST00000641756 KIR2DL5BQ8NHK3 375 aa12.61□□□□□ -0.39
PHGDH-226ENST00000641756 TRAV13-1A0A0B4J241 112 aa12.6□□□□□ -0.39
PHGDH-226ENST00000641756 DEFB135Q30KP9 77 aa12.6□□□□□ -0.39
PHGDH-226ENST00000641756 TEP1Q99973 2627 aaKnown RBP12.6□□□□□ -0.39
PHGDH-226ENST00000641756 TIRAPP58753 221 aa12.59□□□□□ -0.39
PHGDH-226ENST00000641756 LINC00242Q5T6M2 205 aa12.59□□□□□ -0.39
PHGDH-226ENST00000641756 CSDC2Q9Y534 153 aaKnown RBP12.59□□□□□ -0.39
PHGDH-226ENST00000641756 CDC42SE2Q9NRR3 84 aa12.59□□□□□ -0.39
PHGDH-226ENST00000641756 PGPEP1Q9NXJ5 209 aa12.59□□□□□ -0.39
PHGDH-226ENST00000641756 NDUFA12Q9UI09 145 aa12.59□□□□□ -0.39
PHGDH-226ENST00000641756 TRRAPQ9Y4A5 3859 aa12.59□□□□□ -0.39
PHGDH-226ENST00000641756 LINC00612Q8N6U2 182 aa12.58□□□□□ -0.4
PHGDH-226ENST00000641756 IGLV5-45A0A087WSX0 123 aa12.58□□□□□ -0.4
PHGDH-226ENST00000641756 DEFB4AO15263 64 aa12.58□□□□□ -0.4
PHGDH-226ENST00000641756 SMIM9A6NGZ8 99 aa12.57□□□□□ -0.4
PHGDH-226ENST00000641756 GAGE6Q13070 117 aa12.57□□□□□ -0.4
PHGDH-226ENST00000641756 NBEAL2Q6ZNJ1 2754 aa12.57□□□□□ -0.4
PHGDH-226ENST00000641756 TMEM238C9JI98 176 aa12.56□□□□□ -0.4
PHGDH-226ENST00000641756 HERVK_113P63121 156 aa12.56□□□□□ -0.4
PHGDH-226ENST00000641756 TMEM101Q96IK0 257 aa12.56□□□□□ -0.4
PHGDH-226ENST00000641756 F8P00451 2351 aa12.56□□□□□ -0.4
PHGDH-226ENST00000641756 CFC1BP0CG36 223 aa12.56□□□□□ -0.4
PHGDH-226ENST00000641756 CFC1P0CG37 223 aa12.56□□□□□ -0.4
PHGDH-226ENST00000641756 FAM222AQ5U5X8 452 aa12.56□□□□□ -0.4
PHGDH-226ENST00000641756 MUSTN1Q8IVN3 82 aa12.56□□□□□ -0.4
PHGDH-226ENST00000641756 SMAGPQ0VAQ4 97 aa12.55□□□□□ -0.4
PHGDH-226ENST00000641756 TSPAN13O95857 204 aa12.55□□□□□ -0.4
PHGDH-226ENST00000641756 APOC4P55056 127 aa12.55□□□□□ -0.4
PHGDH-226ENST00000641756 SFTA2Q6UW10 78 aa12.55□□□□□ -0.4
PHGDH-226ENST00000641756 LITAFQ99732 161 aa12.55□□□□□ -0.4
PHGDH-226ENST00000641756 TRBV6-8A0A0A6YYG3 113 aa12.54□□□□□ -0.4
PHGDH-226ENST00000641756 A4D1N5 150 aa12.54□□□□□ -0.4
PHGDH-226ENST00000641756 ZFAND6Q6FIF0 208 aa12.54□□□□□ -0.4
PHGDH-226ENST00000641756 WFDC9Q8NEX5 89 aa12.54□□□□□ -0.4
PHGDH-226ENST00000641756 GYPEP15421 78 aa12.53□□□□□ -0.4
PHGDH-226ENST00000641756 FAM19A3Q7Z5A8 133 aa12.53□□□□□ -0.4
PHGDH-226ENST00000641756 ADAMTSL4-AS1Q5T5F5 129 aa12.53□□□□□ -0.4
PHGDH-226ENST00000641756 CHCHD5Q9BSY4 110 aa12.53□□□□□ -0.4
PHGDH-226ENST00000641756 IGHV4-28A0A0C4DH34 117 aa12.52□□□□□ -0.41
PHGDH-226ENST00000641756 IGKV3OR2-268A0A0C4DH90 116 aa12.52□□□□□ -0.41
PHGDH-226ENST00000641756 H7C423 109 aa12.52□□□□□ -0.41
PHGDH-226ENST00000641756 IGLV4-60A0A075B6I1 120 aa12.51□□□□□ -0.41
PHGDH-226ENST00000641756 H3BMG7 143 aa12.51□□□□□ -0.41
PHGDH-226ENST00000641756 EIF4EBP3O60516 100 aaPredicted RBP12.51□□□□□ -0.41
PHGDH-226ENST00000641756 SMIM1B2RUZ4 78 aa12.5□□□□□ -0.41
PHGDH-226ENST00000641756 RPL24P83731 157 aaKnown RBP12.5□□□□□ -0.41
PHGDH-226ENST00000641756 OCIAD2Q56VL3 154 aa12.5□□□□□ -0.41
PHGDH-226ENST00000641756 A0A096LPF7 62 aa12.5□□□□□ -0.41
PHGDH-226ENST00000641756 IGLV5-39A0A0G2JS06 123 aa12.5□□□□□ -0.41
PHGDH-226ENST00000641756 LYRM9A8MSI8 78 aa12.5□□□□□ -0.41
PHGDH-226ENST00000641756 PRSS2P07478 247 aa12.5□□□□□ -0.41
PHGDH-226ENST00000641756 NPC2P61916 151 aa12.5□□□□□ -0.41
PHGDH-226ENST00000641756 ATP6V0E2Q8NHE4 81 aa12.5□□□□□ -0.41
PHGDH-226ENST00000641756 LOC107984156A0A0G2JMH3 177 aa12.49□□□□□ -0.41
PHGDH-226ENST00000641756 IGHV4-30-4P0DP06 118 aa12.49□□□□□ -0.41
PHGDH-226ENST00000641756 ARL17AQ8IVW1 177 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms