RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 GAGE7O76087 117 aa12.16□□□□□ -0.46
PHGDH-211ENST00000641213 GAGE12FP0CL80 117 aa12.16□□□□□ -0.46
PHGDH-211ENST00000641213 GAGE12GP0CL81 117 aa12.16□□□□□ -0.46
PHGDH-211ENST00000641213 GAGE12IP0CL82 117 aa12.16□□□□□ -0.46
PHGDH-211ENST00000641213 RNF151Q2KHN1 245 aa12.16□□□□□ -0.46
PHGDH-211ENST00000641213 DGAT2L7PQ6IED9 249 aa12.16□□□□□ -0.46
PHGDH-211ENST00000641213 NTM-AS1Q6ZSK4 140 aa12.16□□□□□ -0.46
PHGDH-211ENST00000641213 A0A0J9YXY3 114 aa12.15□□□□□ -0.46
PHGDH-211ENST00000641213 GAGE12JA6NER3 117 aa12.15□□□□□ -0.46
PHGDH-211ENST00000641213 LINC00694P0DN24 101 aa12.15□□□□□ -0.46
PHGDH-211ENST00000641213 GAGE4Q13068 117 aa12.15□□□□□ -0.46
PHGDH-211ENST00000641213 GAGE5Q13069 117 aa12.15□□□□□ -0.46
PHGDH-211ENST00000641213 GAGE13Q4V321 117 aa12.15□□□□□ -0.46
PHGDH-211ENST00000641213 TRGV2A0A075B6R0 118 aa12.15□□□□□ -0.46
PHGDH-211ENST00000641213 K7ERU9 68 aa12.15□□□□□ -0.46
PHGDH-211ENST00000641213 TSPAN13O95857 204 aa12.15□□□□□ -0.46
PHGDH-211ENST00000641213 CFC1BP0CG36 223 aa12.15□□□□□ -0.46
PHGDH-211ENST00000641213 CFC1P0CG37 223 aa12.15□□□□□ -0.46
PHGDH-211ENST00000641213 VSIG2Q96IQ7 327 aa12.15□□□□□ -0.46
PHGDH-211ENST00000641213 GEMIN7Q9H840 131 aaKnown RBP12.15□□□□□ -0.46
PHGDH-211ENST00000641213 H3BMG7 143 aa12.14□□□□□ -0.47
PHGDH-211ENST00000641213 SPINK8P0C7L1 97 aa12.14□□□□□ -0.47
PHGDH-211ENST00000641213 OTOGQ6ZRI0 2925 aa12.14□□□□□ -0.47
PHGDH-211ENST00000641213 SBSPONQ8IVN8 264 aa12.14□□□□□ -0.47
PHGDH-211ENST00000641213 TMEM238C9JI98 176 aa12.13□□□□□ -0.47
PHGDH-211ENST00000641213 INAFM1C9JVW0 142 aa12.13□□□□□ -0.47
PHGDH-211ENST00000641213 TIRAPP58753 221 aa12.13□□□□□ -0.47
PHGDH-211ENST00000641213 A8MZ25 164 aa12.12□□□□□ -0.47
PHGDH-211ENST00000641213 CDKN2A-AS1Q9UH64 79 aa12.12□□□□□ -0.47
PHGDH-211ENST00000641213 CSDC2Q9Y534 153 aaKnown RBP12.12□□□□□ -0.47
PHGDH-211ENST00000641213 IGLV5-45A0A087WSX0 123 aa12.12□□□□□ -0.47
PHGDH-211ENST00000641213 CIDEAO60543 219 aa12.12□□□□□ -0.47
PHGDH-211ENST00000641213 MUSTN1Q8IVN3 82 aa12.12□□□□□ -0.47
PHGDH-211ENST00000641213 NDUFA12Q9UI09 145 aa12.12□□□□□ -0.47
PHGDH-211ENST00000641213 TRBV6-4A0A1B0GX49 114 aa12.11□□□□□ -0.47
PHGDH-211ENST00000641213 A4D1N5 150 aa12.11□□□□□ -0.47
PHGDH-211ENST00000641213 F8W1H4 67 aa12.11□□□□□ -0.47
PHGDH-211ENST00000641213 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.11□□□□□ -0.47
PHGDH-211ENST00000641213 LITAFQ99732 161 aa12.11□□□□□ -0.47
PHGDH-211ENST00000641213 LOC100131303A0A0U1RQF7 123 aa12.1□□□□□ -0.47
PHGDH-211ENST00000641213 COX6A2Q02221 97 aa12.1□□□□□ -0.47
PHGDH-211ENST00000641213 GTSF1LQ9H1H1 148 aa12.1□□□□□ -0.47
PHGDH-211ENST00000641213 FN1P02751 2386 aaKnown RBP12.1□□□□□ -0.47
PHGDH-211ENST00000641213 RPL24P83731 157 aaKnown RBP12.1□□□□□ -0.47
PHGDH-211ENST00000641213 TRGV4A0A0C4DH28 118 aa12.09□□□□□ -0.47
PHGDH-211ENST00000641213 LINC00242Q5T6M2 205 aa12.09□□□□□ -0.47
PHGDH-211ENST00000641213 SFTA2Q6UW10 78 aa12.09□□□□□ -0.47
PHGDH-211ENST00000641213 FAM19A3Q7Z5A8 133 aa12.09□□□□□ -0.47
PHGDH-211ENST00000641213 PRO1854Q9UHT4 67 aa12.09□□□□□ -0.47
PHGDH-211ENST00000641213 NSD1Q96L73 2696 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-211ENST00000641213 C2CD3Q4AC94 2353 aa12.09□□□□□ -0.47
PHGDH-211ENST00000641213 EIF4EBP3O60516 100 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-211ENST00000641213 WFDC2Q14508 124 aa12.09□□□□□ -0.47
PHGDH-211ENST00000641213 ZFAND6Q6FIF0 208 aa12.09□□□□□ -0.47
PHGDH-211ENST00000641213 LOC107984156A0A0G2JMH3 177 aa12.08□□□□□ -0.48
PHGDH-211ENST00000641213 HERVK_113P63121 156 aa12.08□□□□□ -0.48
PHGDH-211ENST00000641213 FHL2Q14192 279 aa12.08□□□□□ -0.48
PHGDH-211ENST00000641213 ARL17AQ8IVW1 177 aa12.08□□□□□ -0.48
PHGDH-211ENST00000641213 SPATA3Q8NHX4 192 aa12.08□□□□□ -0.48
PHGDH-211ENST00000641213 TMEM101Q96IK0 257 aa12.08□□□□□ -0.48
PHGDH-211ENST00000641213 G3V4G9 280 aa12.07□□□□□ -0.48
PHGDH-211ENST00000641213 VPS25Q9BRG1 176 aa12.07□□□□□ -0.48
PHGDH-211ENST00000641213 CDC42SE2Q9NRR3 84 aa12.07□□□□□ -0.48
PHGDH-211ENST00000641213 PRO0461Q9UI25 63 aa12.07□□□□□ -0.48
PHGDH-211ENST00000641213 SMAGPQ0VAQ4 97 aa12.07□□□□□ -0.48
PHGDH-211ENST00000641213 ADAMTSL4-AS1Q5T5F5 129 aa12.07□□□□□ -0.48
PHGDH-211ENST00000641213 TMEM243Q9BU79 118 aa12.07□□□□□ -0.48
PHGDH-211ENST00000641213 NOTCH2Q04721 2471 aa12.07□□□□□ -0.48
PHGDH-211ENST00000641213 CRLF1O75462 422 aa12.06□□□□□ -0.48
PHGDH-211ENST00000641213 VWFP04275 2813 aa12.06□□□□□ -0.48
PHGDH-211ENST00000641213 A0A0B4J2C4 111 aa12.06□□□□□ -0.48
PHGDH-211ENST00000641213 UBE2L6O14933 153 aa12.06□□□□□ -0.48
PHGDH-211ENST00000641213 INSL3P51460 131 aa12.06□□□□□ -0.48
PHGDH-211ENST00000641213 MTURNQ8N3F0 131 aa12.06□□□□□ -0.48
PHGDH-211ENST00000641213 SPANXDQ9BXN6 97 aa12.06□□□□□ -0.48
PHGDH-211ENST00000641213 SPANXCQ9NY87 97 aa12.06□□□□□ -0.48
PHGDH-211ENST00000641213 TRAV13-1A0A0B4J241 112 aa12.05□□□□□ -0.48
PHGDH-211ENST00000641213 TEX48A0A1B0GUV7 120 aa12.05□□□□□ -0.48
PHGDH-211ENST00000641213 PSMB2P49721 201 aa12.05□□□□□ -0.48
PHGDH-211ENST00000641213 IGLV5-39A0A0G2JS06 123 aa12.04□□□□□ -0.48
PHGDH-211ENST00000641213 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.04□□□□□ -0.48
PHGDH-211ENST00000641213 IGHV3-33P01772 117 aa12.04□□□□□ -0.48
PHGDH-211ENST00000641213 C9orf66Q5T8R8 295 aa12.04□□□□□ -0.48
PHGDH-211ENST00000641213 LYRM7Q5U5X0 104 aa12.04□□□□□ -0.48
PHGDH-211ENST00000641213 KIR2DL5BQ8NHK3 375 aa12.04□□□□□ -0.48
PHGDH-211ENST00000641213 H7C423 109 aa12.03□□□□□ -0.48
PHGDH-211ENST00000641213 NDUFA1O15239 70 aa12.03□□□□□ -0.48
PHGDH-211ENST00000641213 PRSS2P07478 247 aa12.03□□□□□ -0.48
PHGDH-211ENST00000641213 MIAQ16674 131 aa12.03□□□□□ -0.48
PHGDH-211ENST00000641213 DEFB130BP0DP73 79 aa12.02□□□□□ -0.48
PHGDH-211ENST00000641213 DEFB130AP0DP74 79 aa12.02□□□□□ -0.48
PHGDH-211ENST00000641213 LINC00612Q8N6U2 182 aa12.02□□□□□ -0.48
PHGDH-211ENST00000641213 X6R8D5 127 aa12.02□□□□□ -0.48
PHGDH-211ENST00000641213 SMIM1B2RUZ4 78 aa12.01□□□□□ -0.49
PHGDH-211ENST00000641213 TIMM17BO60830 172 aa12.01□□□□□ -0.49
PHGDH-211ENST00000641213 TCL1BO95988 128 aa12.01□□□□□ -0.49
PHGDH-211ENST00000641213 SH2D6Q7Z4S9 175 aa12.01□□□□□ -0.49
PHGDH-211ENST00000641213 TENM1Q9UKZ4 2725 aa12.01□□□□□ -0.49
PHGDH-211ENST00000641213 ETDBQ3ZM63 59 aa12.01□□□□□ -0.49
PHGDH-211ENST00000641213 ERG28Q9UKR5 140 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms