RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 PLA2G2AP14555 144 aa11.97□□□□□ -0.49
HNRNPU-228ENST00000640306 ICOSQ9Y6W8 199 aa11.97□□□□□ -0.49
HNRNPU-228ENST00000640306 CLUHP3Q96NS8 147 aa11.97□□□□□ -0.49
HNRNPU-228ENST00000640306 TINCRA0A1B0GVN0 87 aa11.96□□□□□ -0.49
HNRNPU-228ENST00000640306 COX6A2Q02221 97 aa11.96□□□□□ -0.49
HNRNPU-228ENST00000640306 A0A1W2PRX2 142 aa11.96□□□□□ -0.5
HNRNPU-228ENST00000640306 DSCR9P59020 149 aa11.96□□□□□ -0.5
HNRNPU-228ENST00000640306 MIAQ16674 131 aa11.95□□□□□ -0.5
HNRNPU-228ENST00000640306 C11orf72Q8NBR9 251 aa11.95□□□□□ -0.5
HNRNPU-228ENST00000640306 CRLF1O75462 422 aa11.94□□□□□ -0.5
HNRNPU-228ENST00000640306 RNF183Q96D59 192 aa11.94□□□□□ -0.5
HNRNPU-228ENST00000640306 SPANXA1Q9NS26 97 aa11.94□□□□□ -0.5
HNRNPU-228ENST00000640306 LINC00694P0DN24 101 aa11.94□□□□□ -0.5
HNRNPU-228ENST00000640306 RPL13AP40429 203 aaKnown RBP11.94□□□□□ -0.5
HNRNPU-228ENST00000640306 C2orf82Q6UX34 121 aa11.94□□□□□ -0.5
HNRNPU-228ENST00000640306 TRGV1A0A0A0MS02 117 aa11.93□□□□□ -0.5
HNRNPU-228ENST00000640306 TRAV13-1A0A0B4J241 112 aa11.93□□□□□ -0.5
HNRNPU-228ENST00000640306 TRBV30A0A0K0K1B3 111 aa11.93□□□□□ -0.5
HNRNPU-228ENST00000640306 J3QKU1 62 aa11.93□□□□□ -0.5
HNRNPU-228ENST00000640306 IGHV4-31P0DP07 118 aa11.93□□□□□ -0.5
HNRNPU-228ENST00000640306 RNF152Q8N8N0 203 aa11.93□□□□□ -0.5
HNRNPU-228ENST00000640306 TMEM101Q96IK0 257 aa11.93□□□□□ -0.5
HNRNPU-228ENST00000640306 TRAV4A0A0B4J268 109 aa11.92□□□□□ -0.5
HNRNPU-228ENST00000640306 TRBV10-2A0A0K0K1G8 114 aa11.92□□□□□ -0.5
HNRNPU-228ENST00000640306 J3QLI3 93 aa11.92□□□□□ -0.5
HNRNPU-228ENST00000640306 DEFB113Q30KQ7 82 aa11.92□□□□□ -0.5
HNRNPU-228ENST00000640306 TMEM262E9PQX1 116 aa11.92□□□□□ -0.5
HNRNPU-228ENST00000640306 H7C423 109 aa11.92□□□□□ -0.5
HNRNPU-228ENST00000640306 INSP01308 110 aa11.92□□□□□ -0.5
HNRNPU-228ENST00000640306 ZFAND6Q6FIF0 208 aa11.92□□□□□ -0.5
HNRNPU-228ENST00000640306 SPANXDQ9BXN6 97 aa11.92□□□□□ -0.5
HNRNPU-228ENST00000640306 Q9H8V8 135 aa11.92□□□□□ -0.5
HNRNPU-228ENST00000640306 SPANXCQ9NY87 97 aa11.92□□□□□ -0.5
HNRNPU-228ENST00000640306 PEMTQ9UBM1 199 aa11.92□□□□□ -0.5
HNRNPU-228ENST00000640306 EDA2RQ9HAV5 297 aa11.91□□□□□ -0.5
HNRNPU-228ENST00000640306 GCN1Q92616 2671 aaKnown RBP11.91□□□□□ -0.5
HNRNPU-228ENST00000640306 DEFB114Q30KQ6 69 aa11.91□□□□□ -0.5
HNRNPU-228ENST00000640306 TEX29Q8N6K0 151 aa11.91□□□□□ -0.5
HNRNPU-228ENST00000640306 ANAPC13Q9BS18 74 aa11.9□□□□□ -0.5
HNRNPU-228ENST00000640306 ITPR2Q14571 2701 aa11.9□□□□□ -0.5
HNRNPU-228ENST00000640306 COX6CP09669 75 aa11.9□□□□□ -0.5
HNRNPU-228ENST00000640306 SVIPQ8NHG7 77 aa11.9□□□□□ -0.5
HNRNPU-228ENST00000640306 UBE2WQ96B02 151 aa11.9□□□□□ -0.5
HNRNPU-228ENST00000640306 Q96MF0 132 aa11.9□□□□□ -0.5
HNRNPU-228ENST00000640306 SETXQ7Z333 2677 aaKnown RBP11.9□□□□□ -0.5
HNRNPU-228ENST00000640306 HECTD1Q9ULT8 2610 aa11.89□□□□□ -0.51
HNRNPU-228ENST00000640306 MTORP42345 2549 aa11.89□□□□□ -0.51
HNRNPU-228ENST00000640306 TRAV8-4A0A0B4J246 113 aa11.89□□□□□ -0.51
HNRNPU-228ENST00000640306 SNCGO76070 127 aa11.89□□□□□ -0.51
HNRNPU-228ENST00000640306 ODF3L2Q3SX64 289 aa11.89□□□□□ -0.51
HNRNPU-228ENST00000640306 CR1P17927 2039 aa11.89□□□□□ -0.51
HNRNPU-228ENST00000640306 FASNP49327 2511 aaKnown RBP11.89□□□□□ -0.51
HNRNPU-228ENST00000640306 Q6ZTI0 123 aa11.88□□□□□ -0.51
HNRNPU-228ENST00000640306 A8MTW9 85 aa11.88□□□□□ -0.51
HNRNPU-228ENST00000640306 STHQ8IWL8 128 aa11.88□□□□□ -0.51
HNRNPU-228ENST00000640306 GAGE12JA6NER3 117 aa11.87□□□□□ -0.51
HNRNPU-228ENST00000640306 FSHBP01225 129 aa11.87□□□□□ -0.51
HNRNPU-228ENST00000640306 GAGE4Q13068 117 aa11.87□□□□□ -0.51
HNRNPU-228ENST00000640306 GAGE5Q13069 117 aa11.87□□□□□ -0.51
HNRNPU-228ENST00000640306 LINC00242Q5T6M2 205 aa11.87□□□□□ -0.51
HNRNPU-228ENST00000640306 ITPR3Q14573 2671 aa11.87□□□□□ -0.51
HNRNPU-228ENST00000640306 ACANP16112 2415 aa11.87□□□□□ -0.51
HNRNPU-228ENST00000640306 RS1O15537 224 aa11.87□□□□□ -0.51
HNRNPU-228ENST00000640306 C1orf158Q8N1D5 194 aa11.87□□□□□ -0.51
HNRNPU-228ENST00000640306 TTC32Q5I0X7 151 aa11.87□□□□□ -0.51
HNRNPU-228ENST00000640306 C4orf3Q8WVX3 66 aa11.87□□□□□ -0.51
HNRNPU-228ENST00000640306 WFDC11Q8NEX6 87 aa11.86□□□□□ -0.51
HNRNPU-228ENST00000640306 CITED2Q99967 270 aaPredicted RBP11.86□□□□□ -0.51
HNRNPU-228ENST00000640306 IGKV3OR2-268A0A0C4DH90 116 aa11.86□□□□□ -0.51
HNRNPU-228ENST00000640306 GAGE2BQ13066 116 aa11.86□□□□□ -0.51
HNRNPU-228ENST00000640306 BEAN1Q3B7T3 259 aa11.86□□□□□ -0.51
HNRNPU-228ENST00000640306 GAGE2EQ4V326 116 aa11.86□□□□□ -0.51
HNRNPU-228ENST00000640306 KRTAP1-3Q8IUG1 177 aa11.86□□□□□ -0.51
HNRNPU-228ENST00000640306 CITED1Q99966 193 aa11.86□□□□□ -0.51
HNRNPU-228ENST00000640306 GAGE2DQ9UEU5 116 aa11.86□□□□□ -0.51
HNRNPU-228ENST00000640306 MEIG1Q5JSS6 88 aa11.85□□□□□ -0.51
HNRNPU-228ENST00000640306 NTM-AS1Q6ZSK4 140 aa11.85□□□□□ -0.51
HNRNPU-228ENST00000640306 C15orf53Q8NAA6 179 aa11.85□□□□□ -0.51
HNRNPU-228ENST00000640306 YAE1D1Q9NRH1 226 aa11.85□□□□□ -0.51
HNRNPU-228ENST00000640306 FN1P02751 2386 aaKnown RBP11.85□□□□□ -0.51
HNRNPU-228ENST00000640306 NDUFA1O15239 70 aa11.85□□□□□ -0.51
HNRNPU-228ENST00000640306 LINC00308Q8TCZ7 52 aa11.85□□□□□ -0.51
HNRNPU-228ENST00000640306 DNAJC30Q96LL9 226 aa11.85□□□□□ -0.51
HNRNPU-228ENST00000640306 FLNAP21333 2647 aaKnown RBP11.84□□□□□ -0.51
HNRNPU-228ENST00000640306 UNC79Q9P2D8 2635 aa11.84□□□□□ -0.51
HNRNPU-228ENST00000640306 LST1O00453 97 aa11.84□□□□□ -0.51
HNRNPU-228ENST00000640306 CIRBPQ14011 172 aaKnown RBP11.84□□□□□ -0.51
HNRNPU-228ENST00000640306 SOSTDC1Q6X4U4 206 aa11.84□□□□□ -0.51
HNRNPU-228ENST00000640306 PRIMA1Q86XR5 153 aa11.84□□□□□ -0.51
HNRNPU-228ENST00000640306 Q8N2B8 174 aa11.84□□□□□ -0.51
HNRNPU-228ENST00000640306 WFDC10AQ9H1F0 79 aa11.84□□□□□ -0.51
HNRNPU-228ENST00000640306 M0QXV9 152 aa11.83□□□□□ -0.51
HNRNPU-228ENST00000640306 NOTCH2Q04721 2471 aa11.83□□□□□ -0.52
HNRNPU-228ENST00000640306 NOP10Q9NPE3 64 aaKnown RBP11.83□□□□□ -0.52
HNRNPU-228ENST00000640306 TIRAPP58753 221 aa11.83□□□□□ -0.52
HNRNPU-228ENST00000640306 SMIM1B2RUZ4 78 aa11.82□□□□□ -0.52
HNRNPU-228ENST00000640306 PDZD2O15018 2839 aa11.82□□□□□ -0.52
HNRNPU-228ENST00000640306 LOC100131303A0A0U1RQF7 123 aa11.82□□□□□ -0.52
HNRNPU-228ENST00000640306 HERVK_113P63121 156 aa11.82□□□□□ -0.52
HNRNPU-228ENST00000640306 RPL36AP83881 106 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms