RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 TRBV10-1A0A0K0K1A3 114 aa10.78□□□□□ -0.68
TRIM3-215ENST00000639856 RNASE13Q5GAN3 156 aaKnown RBP10.78□□□□□ -0.68
TRIM3-215ENST00000639856 C16orf74Q96GX8 76 aa10.78□□□□□ -0.68
TRIM3-215ENST00000639856 NOP10Q9NPE3 64 aaKnown RBP10.78□□□□□ -0.68
TRIM3-215ENST00000639856 IGHV3-64A0A075B6Q5 118 aa10.77□□□□□ -0.69
TRIM3-215ENST00000639856 UBE2D1P51668 147 aa10.77□□□□□ -0.69
TRIM3-215ENST00000639856 PLAC8L1A1L4L8 177 aa10.76□□□□□ -0.69
TRIM3-215ENST00000639856 K7EQD1 137 aa10.76□□□□□ -0.69
TRIM3-215ENST00000639856 RRN3P1Q2M238 152 aa10.76□□□□□ -0.69
TRIM3-215ENST00000639856 OCIAD2Q56VL3 154 aa10.76□□□□□ -0.69
TRIM3-215ENST00000639856 Q6ZUT4 128 aa10.76□□□□□ -0.69
TRIM3-215ENST00000639856 PRIMA1Q86XR5 153 aa10.76□□□□□ -0.69
TRIM3-215ENST00000639856 NBEAL2Q6ZNJ1 2754 aa10.76□□□□□ -0.69
TRIM3-215ENST00000639856 TINCRA0A1B0GVN0 87 aa10.76□□□□□ -0.69
TRIM3-215ENST00000639856 IGHV3-30P01768 117 aa10.76□□□□□ -0.69
TRIM3-215ENST00000639856 IGHV3-30-5P0DP03 117 aa10.76□□□□□ -0.69
TRIM3-215ENST00000639856 RPL36AP83881 106 aaKnown RBP10.76□□□□□ -0.69
TRIM3-215ENST00000639856 WFDC9Q8NEX5 89 aa10.76□□□□□ -0.69
TRIM3-215ENST00000639856 RPL36ALQ969Q0 106 aaKnown RBP10.76□□□□□ -0.69
TRIM3-215ENST00000639856 VPS25Q9BRG1 176 aa10.76□□□□□ -0.69
TRIM3-215ENST00000639856 TIMM21Q9BVV7 248 aa10.75□□□□□ -0.69
TRIM3-215ENST00000639856 IGHV3-30-3P0DP02 117 aa10.75□□□□□ -0.69
TRIM3-215ENST00000639856 DAZ4Q86SG3 579 aaKnown RBP10.73□□□□□ -0.69
TRIM3-215ENST00000639856 DAZ3Q9NR90 486 aaKnown RBP10.73□□□□□ -0.69
TRIM3-215ENST00000639856 K7ERU9 68 aa10.73□□□□□ -0.69
TRIM3-215ENST00000639856 OVOL2Q9BRP0 275 aa10.73□□□□□ -0.69
TRIM3-215ENST00000639856 PGPEP1Q9NXJ5 209 aa10.73□□□□□ -0.69
TRIM3-215ENST00000639856 PKD1L1Q8TDX9 2849 aa10.73□□□□□ -0.69
TRIM3-215ENST00000639856 COL6A5A8TX70 2615 aa10.72□□□□□ -0.69
TRIM3-215ENST00000639856 TRAV8-3A0A0A6YYJ7 113 aa10.72□□□□□ -0.69
TRIM3-215ENST00000639856 IGHV1-58A0A0C4DH39 117 aa10.72□□□□□ -0.69
TRIM3-215ENST00000639856 UBE2D3P61077 147 aa10.72□□□□□ -0.69
TRIM3-215ENST00000639856 UBE2D2P62837 147 aa10.72□□□□□ -0.69
TRIM3-215ENST00000639856 DGAT2L7PQ6IED9 249 aa10.72□□□□□ -0.69
TRIM3-215ENST00000639856 GAGE7O76087 117 aa10.72□□□□□ -0.69
TRIM3-215ENST00000639856 GAGE12FP0CL80 117 aa10.72□□□□□ -0.69
TRIM3-215ENST00000639856 GAGE12GP0CL81 117 aa10.72□□□□□ -0.69
TRIM3-215ENST00000639856 GAGE12IP0CL82 117 aa10.72□□□□□ -0.69
TRIM3-215ENST00000639856 C10orf126Q8N4M7 172 aa10.72□□□□□ -0.69
TRIM3-215ENST00000639856 TRGV2A0A075B6R0 118 aa10.71□□□□□ -0.69
TRIM3-215ENST00000639856 CIDEAO60543 219 aa10.71□□□□□ -0.69
TRIM3-215ENST00000639856 APOMO95445 188 aa10.71□□□□□ -0.69
TRIM3-215ENST00000639856 NTM-AS1Q6ZSK4 140 aa10.71□□□□□ -0.69
TRIM3-215ENST00000639856 C3orf56Q8N813 242 aa10.71□□□□□ -0.69
TRIM3-215ENST00000639856 GEMIN7Q9H840 131 aaKnown RBP10.71□□□□□ -0.69
TRIM3-215ENST00000639856 GAGE12JA6NER3 117 aa10.7□□□□□ -0.7
TRIM3-215ENST00000639856 GAGE4Q13068 117 aa10.7□□□□□ -0.7
TRIM3-215ENST00000639856 GAGE5Q13069 117 aa10.7□□□□□ -0.7
TRIM3-215ENST00000639856 GAGE13Q4V321 117 aa10.7□□□□□ -0.7
TRIM3-215ENST00000639856 VSIG2Q96IQ7 327 aa10.7□□□□□ -0.7
TRIM3-215ENST00000639856 CSDC2Q9Y534 153 aaKnown RBP10.7□□□□□ -0.7
TRIM3-215ENST00000639856 A0A0J9YXY3 114 aa10.7□□□□□ -0.7
TRIM3-215ENST00000639856 TMEM238C9JI98 176 aa10.7□□□□□ -0.7
TRIM3-215ENST00000639856 CFC1BP0CG36 223 aa10.7□□□□□ -0.7
TRIM3-215ENST00000639856 CFC1P0CG37 223 aa10.7□□□□□ -0.7
TRIM3-215ENST00000639856 LINC00694P0DN24 101 aa10.7□□□□□ -0.7
TRIM3-215ENST00000639856 WIPF1O43516 503 aa10.69□□□□□ -0.7
TRIM3-215ENST00000639856 TIRAPP58753 221 aa10.69□□□□□ -0.7
TRIM3-215ENST00000639856 IGLV5-45A0A087WSX0 123 aa10.69□□□□□ -0.7
TRIM3-215ENST00000639856 TRBV6-4A0A1B0GX49 114 aa10.69□□□□□ -0.7
TRIM3-215ENST00000639856 TSPAN13O95857 204 aa10.69□□□□□ -0.7
TRIM3-215ENST00000639856 SPINK8P0C7L1 97 aa10.69□□□□□ -0.7
TRIM3-215ENST00000639856 OXLD1Q5BKU9 147 aa10.69□□□□□ -0.7
TRIM3-215ENST00000639856 SBSPONQ8IVN8 264 aa10.69□□□□□ -0.7
TRIM3-215ENST00000639856 H3BMG7 143 aa10.68□□□□□ -0.7
TRIM3-215ENST00000639856 F8W1H4 67 aa10.67□□□□□ -0.7
TRIM3-215ENST00000639856 GTSF1LQ9H1H1 148 aa10.67□□□□□ -0.7
TRIM3-215ENST00000639856 CDKN2A-AS1Q9UH64 79 aa10.67□□□□□ -0.7
TRIM3-215ENST00000639856 NDUFA12Q9UI09 145 aa10.67□□□□□ -0.7
TRIM3-215ENST00000639856 X6R8D5 127 aa10.67□□□□□ -0.7
TRIM3-215ENST00000639856 TRGV4A0A0C4DH28 118 aa10.66□□□□□ -0.7
TRIM3-215ENST00000639856 A4D1N5 150 aa10.66□□□□□ -0.7
TRIM3-215ENST00000639856 RPL24P83731 157 aaKnown RBP10.66□□□□□ -0.7
TRIM3-215ENST00000639856 SMAGPQ0VAQ4 97 aa10.66□□□□□ -0.7
TRIM3-215ENST00000639856 DEFB135Q30KP9 77 aa10.66□□□□□ -0.7
TRIM3-215ENST00000639856 MUSTN1Q8IVN3 82 aa10.66□□□□□ -0.7
TRIM3-215ENST00000639856 HERVK_113P63121 156 aa10.66□□□□□ -0.7
TRIM3-215ENST00000639856 SHISA2Q6UWI4 295 aa10.66□□□□□ -0.7
TRIM3-215ENST00000639856 FAM19A3Q7Z5A8 133 aa10.66□□□□□ -0.7
TRIM3-215ENST00000639856 LITAFQ99732 161 aa10.66□□□□□ -0.7
TRIM3-215ENST00000639856 PRO1854Q9UHT4 67 aa10.66□□□□□ -0.7
TRIM3-215ENST00000639856 LOC100131303A0A0U1RQF7 123 aa10.65□□□□□ -0.7
TRIM3-215ENST00000639856 A8MZ25 164 aa10.65□□□□□ -0.7
TRIM3-215ENST00000639856 COX6A2Q02221 97 aa10.65□□□□□ -0.7
TRIM3-215ENST00000639856 LINC00242Q5T6M2 205 aa10.65□□□□□ -0.7
TRIM3-215ENST00000639856 ZFAND6Q6FIF0 208 aa10.65□□□□□ -0.7
TRIM3-215ENST00000639856 TMEM243Q9BU79 118 aa10.64□□□□□ -0.71
TRIM3-215ENST00000639856 CDC42SE2Q9NRR3 84 aa10.64□□□□□ -0.71
TRIM3-215ENST00000639856 LOC107984156A0A0G2JMH3 177 aa10.64□□□□□ -0.71
TRIM3-215ENST00000639856 IGHV4-30-4P0DP06 118 aa10.64□□□□□ -0.71
TRIM3-215ENST00000639856 KRTAP10-11P60412 298 aa10.64□□□□□ -0.71
TRIM3-215ENST00000639856 FHL2Q14192 279 aa10.64□□□□□ -0.71
TRIM3-215ENST00000639856 ARL17AQ8IVW1 177 aa10.64□□□□□ -0.71
TRIM3-215ENST00000639856 TMEM101Q96IK0 257 aa10.63□□□□□ -0.71
TRIM3-215ENST00000639856 A0A0B4J2C4 111 aa10.63□□□□□ -0.71
TRIM3-215ENST00000639856 G3V4G9 280 aa10.63□□□□□ -0.71
TRIM3-215ENST00000639856 UBE2L6O14933 153 aa10.63□□□□□ -0.71
TRIM3-215ENST00000639856 APOC4P55056 127 aa10.63□□□□□ -0.71
TRIM3-215ENST00000639856 WFDC2Q14508 124 aa10.63□□□□□ -0.71
TRIM3-215ENST00000639856 LYRM7Q5U5X0 104 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms