RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 RNF182Q8N6D2 247 aa4.64□□□□□ -1.67
NECAP1-220ENST00000639841 OR10AC1Q8NH08 325 aa4.64□□□□□ -1.67
NECAP1-220ENST00000639841 PRELID3AQ96N28 172 aa4.64□□□□□ -1.67
NECAP1-220ENST00000639841 SCGB3A1Q96QR1 104 aa4.64□□□□□ -1.67
NECAP1-220ENST00000639841 METTL1Q9UBP6 276 aaKnown RBP4.64□□□□□ -1.67
NECAP1-220ENST00000639841 AGRNO00468 2067 aa4.64□□□□□ -1.67
NECAP1-220ENST00000639841 IGHV3-73A0A0B4J1V6 119 aa4.64□□□□□ -1.67
NECAP1-220ENST00000639841 OR2T8A6NH00 312 aa4.64□□□□□ -1.67
NECAP1-220ENST00000639841 ZNF736B4DX44 427 aaPredicted RBP4.64□□□□□ -1.67
NECAP1-220ENST00000639841 NPYP01303 97 aa4.64□□□□□ -1.67
NECAP1-220ENST00000639841 SAA2P0DJI9 122 aaPredicted RBP4.64□□□□□ -1.67
NECAP1-220ENST00000639841 HMGN3Q15651 99 aa4.64□□□□□ -1.67
NECAP1-220ENST00000639841 ZNF880Q6PDB4 577 aa4.64□□□□□ -1.67
NECAP1-220ENST00000639841 C7orf65Q6ZTY9 151 aa4.64□□□□□ -1.67
NECAP1-220ENST00000639841 C1orf64Q8NEQ6 169 aa4.64□□□□□ -1.67
NECAP1-220ENST00000639841 SFT2D1Q8WV19 159 aa4.64□□□□□ -1.67
NECAP1-220ENST00000639841 COMMD3Q9UBI1 195 aa4.64□□□□□ -1.67
NECAP1-220ENST00000639841 TRAPPC1Q9Y5R8 145 aa4.64□□□□□ -1.67
NECAP1-220ENST00000639841 HUWE1Q7Z6Z7 4374 aaKnown RBP4.63□□□□□ -1.67
NECAP1-220ENST00000639841 PANO1I0J062 215 aa4.63□□□□□ -1.67
NECAP1-220ENST00000639841 FXYD3Q14802 87 aa4.63□□□□□ -1.67
NECAP1-220ENST00000639841 TMEM91Q6ZNR0 172 aa4.63□□□□□ -1.67
NECAP1-220ENST00000639841 DPH3Q96FX2 82 aa4.63□□□□□ -1.67
NECAP1-220ENST00000639841 SMDT1Q9H4I9 107 aa4.63□□□□□ -1.67
NECAP1-220ENST00000639841 TAS2R4Q9NYW5 299 aa4.63□□□□□ -1.67
NECAP1-220ENST00000639841 PHOX2AO14813 284 aa4.62□□□□□ -1.67
NECAP1-220ENST00000639841 HLA-DRB4P13762 266 aa4.62□□□□□ -1.67
NECAP1-220ENST00000639841 SUPT4H1P63272 117 aaKnown RBP4.62□□□□□ -1.67
NECAP1-220ENST00000639841 NDPQ00604 133 aa4.62□□□□□ -1.67
NECAP1-220ENST00000639841 TEN1Q86WV5 123 aa4.62□□□□□ -1.67
NECAP1-220ENST00000639841 DIRC1Q969H9 104 aa4.62□□□□□ -1.67
NECAP1-220ENST00000639841 SNHG12Q9BXW3 62 aa4.62□□□□□ -1.67
NECAP1-220ENST00000639841 HLA-DRB4X5D2U9 266 aa4.62□□□□□ -1.67
NECAP1-220ENST00000639841 EPPK1P58107 5090 aaKnown RBP4.62□□□□□ -1.67
NECAP1-220ENST00000639841 HIST1H1BP16401 226 aaKnown RBP4.62□□□□□ -1.67
NECAP1-220ENST00000639841 EIF5AL1Q6IS14 154 aaKnown RBP4.62□□□□□ -1.67
NECAP1-220ENST00000639841 Q8NDZ9 215 aa4.62□□□□□ -1.67
NECAP1-220ENST00000639841 BPIFB6Q8NFQ5 453 aa4.62□□□□□ -1.67
NECAP1-220ENST00000639841 AP4S1Q9Y587 144 aa4.62□□□□□ -1.67
NECAP1-220ENST00000639841 H3BT86 120 aa4.61□□□□□ -1.67
NECAP1-220ENST00000639841 SNRPD3P62318 126 aaKnown RBP4.61□□□□□ -1.67
NECAP1-220ENST00000639841 DEFB114Q30KQ6 69 aa4.61□□□□□ -1.67
NECAP1-220ENST00000639841 IZUMO2Q6UXV1 221 aa4.61□□□□□ -1.67
NECAP1-220ENST00000639841 GRIFINA4D1Z8 144 aa4.6□□□□□ -1.67
NECAP1-220ENST00000639841 H3BQ85 93 aa4.6□□□□□ -1.67
NECAP1-220ENST00000639841 UQCRQO14949 82 aa4.6□□□□□ -1.67
NECAP1-220ENST00000639841 MT-ND6P03923 174 aa4.6□□□□□ -1.67
NECAP1-220ENST00000639841 RPL28P46779 137 aaKnown RBP4.6□□□□□ -1.67
NECAP1-220ENST00000639841 XCL1P47992 114 aa4.6□□□□□ -1.67
NECAP1-220ENST00000639841 GNGT1P63211 74 aa4.6□□□□□ -1.67
NECAP1-220ENST00000639841 CIB3Q96Q77 187 aaPredicted RBP4.6□□□□□ -1.67
NECAP1-220ENST00000639841 IMMP2LQ96T52 175 aa4.6□□□□□ -1.67
NECAP1-220ENST00000639841 TRGC1P0CF51 173 aa4.6□□□□□ -1.67
NECAP1-220ENST00000639841 LYZL2Q7Z4W2 148 aa4.6□□□□□ -1.67
NECAP1-220ENST00000639841 VSTM2AQ8TAG5 236 aa4.6□□□□□ -1.67
NECAP1-220ENST00000639841 C2orf70A6NJV1 201 aa4.59□□□□□ -1.67
NECAP1-220ENST00000639841 TXNL4BQ9NX01 149 aaKnown RBP4.59□□□□□ -1.67
NECAP1-220ENST00000639841 MDFICQ9P1T7 246 aa4.59□□□□□ -1.67
NECAP1-220ENST00000639841 C7orf71A4D174 169 aa4.58□□□□□ -1.68
NECAP1-220ENST00000639841 FNDC10F2Z333 226 aa4.58□□□□□ -1.68
NECAP1-220ENST00000639841 EIF2B2P49770 351 aaKnown RBP4.58□□□□□ -1.68
NECAP1-220ENST00000639841 HSD52Q0P140 79 aa4.58□□□□□ -1.68
NECAP1-220ENST00000639841 KLK9Q2XQG4 91 aa4.58□□□□□ -1.68
NECAP1-220ENST00000639841 TTC9CQ8N5M4 171 aa4.58□□□□□ -1.68
NECAP1-220ENST00000639841 UBALD1Q8TB05 177 aa4.58□□□□□ -1.68
NECAP1-220ENST00000639841 KLK9Q9UKQ9 250 aa4.58□□□□□ -1.68
NECAP1-220ENST00000639841 TNCP24821 2201 aa4.58□□□□□ -1.68
NECAP1-220ENST00000639841 TRBV7-1A0A0A6YYK4 115 aa4.58□□□□□ -1.68
NECAP1-220ENST00000639841 OR10P1Q8NGE3 313 aa4.58□□□□□ -1.68
NECAP1-220ENST00000639841 FAM103A1Q9BTL3 118 aaKnown RBP4.58□□□□□ -1.68
NECAP1-220ENST00000639841 CSMD3Q7Z407 3707 aa4.58□□□□□ -1.68
NECAP1-220ENST00000639841 PITX3O75364 302 aa4.57□□□□□ -1.68
NECAP1-220ENST00000639841 HBDP02042 147 aa4.57□□□□□ -1.68
NECAP1-220ENST00000639841 CBLN1P23435 193 aa4.57□□□□□ -1.68
NECAP1-220ENST00000639841 RPL39P5Q59GN2 51 aa4.57□□□□□ -1.68
NECAP1-220ENST00000639841 Q6ZQT7 251 aa4.57□□□□□ -1.68
NECAP1-220ENST00000639841 MIEN1Q9BRT3 115 aa4.57□□□□□ -1.68
NECAP1-220ENST00000639841 GINS4Q9BRT9 223 aa4.57□□□□□ -1.68
NECAP1-220ENST00000639841 LSM2Q9Y333 95 aaKnown RBP4.57□□□□□ -1.68
NECAP1-220ENST00000639841 STARD9Q9P2P6 4700 aa4.56□□□□□ -1.68
NECAP1-220ENST00000639841 C16orf90A8MZG2 172 aa4.56□□□□□ -1.68
NECAP1-220ENST00000639841 MPC2O95563 127 aa4.56□□□□□ -1.68
NECAP1-220ENST00000639841 DNAH10OSP0CZ25 163 aa4.56□□□□□ -1.68
NECAP1-220ENST00000639841 DEFA4P12838 97 aa4.56□□□□□ -1.68
NECAP1-220ENST00000639841 GTF2H5Q6ZYL4 71 aa4.56□□□□□ -1.68
NECAP1-220ENST00000639841 LINC00612Q8N6U2 182 aa4.56□□□□□ -1.68
NECAP1-220ENST00000639841 PYYP10082 97 aa4.55□□□□□ -1.68
NECAP1-220ENST00000639841 ZNF22P17026 224 aaPredicted RBP4.55□□□□□ -1.68
NECAP1-220ENST00000639841 CATR1Q13166 79 aa4.55□□□□□ -1.68
NECAP1-220ENST00000639841 FKBP11Q9NYL4 201 aa4.55□□□□□ -1.68
NECAP1-220ENST00000639841 MRPS14O60783 128 aaKnown RBP4.54□□□□□ -1.68
NECAP1-220ENST00000639841 TRAV2A0A0B4J234 112 aa4.54□□□□□ -1.68
NECAP1-220ENST00000639841 TMEM14DPA8MWL7 114 aa4.54□□□□□ -1.68
NECAP1-220ENST00000639841 SYNGR2O43760 224 aa4.54□□□□□ -1.68
NECAP1-220ENST00000639841 CLLU1Q5K131 121 aa4.54□□□□□ -1.68
NECAP1-220ENST00000639841 C6orf201Q7Z4U5 140 aa4.54□□□□□ -1.68
NECAP1-220ENST00000639841 GFRA4Q9GZZ7 299 aa4.54□□□□□ -1.68
NECAP1-220ENST00000639841 HERC2O95714 4834 aa4.54□□□□□ -1.68
NECAP1-220ENST00000639841 PLECQ15149 4684 aaKnown RBP4.54□□□□□ -1.68
NECAP1-220ENST00000639841 TRBV6-7A0A0A0MS04 114 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms