RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 SMAD5-AS1Q9Y6J3 95 aa3.14□□□□□ -1.91
SCN3A-209ENST00000639244 I3L3M4 83 aa3.13□□□□□ -1.91
SCN3A-209ENST00000639244 KRTAP27-1Q3LI81 207 aa3.13□□□□□ -1.91
SCN3A-209ENST00000639244 COL27A1Q8IZC6 1860 aaPredicted RBP3.13□□□□□ -1.91
SCN3A-209ENST00000639244 A0A0J9YX75 114 aa3.13□□□□□ -1.91
SCN3A-209ENST00000639244 K7ERS5 55 aa3.13□□□□□ -1.91
SCN3A-209ENST00000639244 ATP6V0E1O15342 81 aa3.13□□□□□ -1.91
SCN3A-209ENST00000639244 NREPQ16612 68 aa3.13□□□□□ -1.91
SCN3A-209ENST00000639244 Q6ZRP5 223 aa3.13□□□□□ -1.91
SCN3A-209ENST00000639244 TRBV6-6A0A0A6YYG2 114 aa3.13□□□□□ -1.91
SCN3A-209ENST00000639244 PDE6GP18545 87 aa3.13□□□□□ -1.91
SCN3A-209ENST00000639244 Q86TA4 180 aa3.13□□□□□ -1.91
SCN3A-209ENST00000639244 ZNF524Q96C55 264 aa3.13□□□□□ -1.91
SCN3A-209ENST00000639244 LINC00467Q9BRT7 94 aa3.13□□□□□ -1.91
SCN3A-209ENST00000639244 ATRQ13535 2644 aa3.13□□□□□ -1.91
SCN3A-209ENST00000639244 LINC00528Q8N1L1 170 aa3.13□□□□□ -1.91
SCN3A-209ENST00000639244 TOMM7Q9P0U1 55 aa3.13□□□□□ -1.91
SCN3A-209ENST00000639244 GNRH2O43555 120 aa3.13□□□□□ -1.91
SCN3A-209ENST00000639244 UTP20O75691 2785 aaKnown RBP3.12□□□□□ -1.91
SCN3A-209ENST00000639244 CXorf51AA0A1B0GTR3 108 aa3.12□□□□□ -1.91
SCN3A-209ENST00000639244 RPL28P46779 137 aaKnown RBP3.12□□□□□ -1.91
SCN3A-209ENST00000639244 ACACBO00763 2458 aa3.12□□□□□ -1.91
SCN3A-209ENST00000639244 IGKV1D-42A0A075B6H8 117 aa3.12□□□□□ -1.91
SCN3A-209ENST00000639244 TRBV6-8A0A0A6YYG3 113 aa3.12□□□□□ -1.91
SCN3A-209ENST00000639244 COX6B1P14854 86 aa3.12□□□□□ -1.91
SCN3A-209ENST00000639244 LINC01560Q8TB33 94 aa3.12□□□□□ -1.91
SCN3A-209ENST00000639244 MUC22E2RYF6 1773 aaPredicted RBP3.12□□□□□ -1.91
SCN3A-209ENST00000639244 IGHV3-73A0A0B4J1V6 119 aa3.12□□□□□ -1.91
SCN3A-209ENST00000639244 NTN3O00634 580 aaPredicted RBP3.12□□□□□ -1.91
SCN3A-209ENST00000639244 WFDC9Q8NEX5 89 aa3.12□□□□□ -1.91
SCN3A-209ENST00000639244 KLF14Q8TD94 323 aaPredicted RBP3.12□□□□□ -1.91
SCN3A-209ENST00000639244 TRBV7-4A0A0J9YYF1 115 aa3.12□□□□□ -1.91
SCN3A-209ENST00000639244 BPY2O14599 106 aa3.12□□□□□ -1.91
SCN3A-209ENST00000639244 XAGE1AQ9HD64 81 aa3.12□□□□□ -1.91
SCN3A-209ENST00000639244 TMEM14CQ9P0S9 112 aa3.12□□□□□ -1.91
SCN3A-209ENST00000639244 A0A0J9YXY3 114 aa3.12□□□□□ -1.91
SCN3A-209ENST00000639244 C17orf98A8MV24 154 aa3.12□□□□□ -1.91
SCN3A-209ENST00000639244 H0YGX0 51 aa3.12□□□□□ -1.91
SCN3A-209ENST00000639244 HTN3P15516 51 aa3.12□□□□□ -1.91
SCN3A-209ENST00000639244 PATE2Q6UY27 113 aa3.12□□□□□ -1.91
SCN3A-209ENST00000639244 IGKV1-27A0A075B6S5 117 aa3.11□□□□□ -1.91
SCN3A-209ENST00000639244 IGHV3-11P01762 117 aa3.11□□□□□ -1.91
SCN3A-209ENST00000639244 B3GALT5-AS1P59052 145 aa3.11□□□□□ -1.91
SCN3A-209ENST00000639244 C19orf73Q9NVV2 129 aa3.11□□□□□ -1.91
SCN3A-209ENST00000639244 PIEZO1Q92508 2521 aa3.11□□□□□ -1.91
SCN3A-209ENST00000639244 CENPEQ02224 2701 aa3.11□□□□□ -1.91
SCN3A-209ENST00000639244 LINC00846Q9NV44 126 aa3.11□□□□□ -1.91
SCN3A-209ENST00000639244 SRRM2Q9UQ35 2752 aaKnown RBP3.11□□□□□ -1.91
SCN3A-209ENST00000639244 PRB1P04280 392 aa3.11□□□□□ -1.91
SCN3A-209ENST00000639244 KLHL30-AS1Q8NEE0 82 aa3.11□□□□□ -1.91
SCN3A-209ENST00000639244 SMIM2Q9BVW6 85 aa3.11□□□□□ -1.91
SCN3A-209ENST00000639244 MRPL36Q9P0J6 103 aaKnown RBP3.11□□□□□ -1.91
SCN3A-209ENST00000639244 C16orf90A8MZG2 172 aa3.11□□□□□ -1.91
SCN3A-209ENST00000639244 FAM27BQ5VT28 67 aa3.11□□□□□ -1.91
SCN3A-209ENST00000639244 ZNF702PQ9H963 129 aa3.11□□□□□ -1.91
SCN3A-209ENST00000639244 ORMDL1Q9P0S3 153 aa3.11□□□□□ -1.91
SCN3A-209ENST00000639244 COL4A6Q14031 1691 aa3.11□□□□□ -1.91
SCN3A-209ENST00000639244 USP24Q9UPU5 2620 aa3.1□□□□□ -1.91
SCN3A-209ENST00000639244 COL4A5P29400 1685 aa3.1□□□□□ -1.91
SCN3A-209ENST00000639244 A0A087X002 238 aa3.1□□□□□ -1.91
SCN3A-209ENST00000639244 ZNF503-AS2A6NEH8 195 aa3.1□□□□□ -1.91
SCN3A-209ENST00000639244 MIAQ16674 131 aa3.1□□□□□ -1.91
SCN3A-209ENST00000639244 LYZL1Q6UWQ5 148 aa3.1□□□□□ -1.91
SCN3A-209ENST00000639244 ZNF843Q8N446 348 aa3.1□□□□□ -1.91
SCN3A-209ENST00000639244 FDCSPQ8NFU4 85 aa3.1□□□□□ -1.91
SCN3A-209ENST00000639244 CHCHD10Q8WYQ3 142 aaPredicted RBP3.1□□□□□ -1.91
SCN3A-209ENST00000639244 LYNX1G3V0Z9 82 aa3.1□□□□□ -1.91
SCN3A-209ENST00000639244 LYNX1P0DP58 116 aa3.1□□□□□ -1.91
SCN3A-209ENST00000639244 IGHV1-2P23083 117 aa3.1□□□□□ -1.91
SCN3A-209ENST00000639244 FAM229BQ4G0N7 80 aa3.1□□□□□ -1.91
SCN3A-209ENST00000639244 HAMPP81172 84 aa3.1□□□□□ -1.91
SCN3A-209ENST00000639244 IGFL4Q6B9Z1 124 aa3.1□□□□□ -1.91
SCN3A-209ENST00000639244 C2orf66Q6UXQ4 117 aa3.1□□□□□ -1.91
SCN3A-209ENST00000639244 LINC00114Q6XXX2 140 aa3.1□□□□□ -1.91
SCN3A-209ENST00000639244 HELZ2Q9BYK8 2649 aaKnown RBP3.1□□□□□ -1.91
SCN3A-209ENST00000639244 IGHV1OR15-1A0A075B7D0 117 aa3.1□□□□□ -1.91
SCN3A-209ENST00000639244 C7orf69Q9H7B7 122 aa3.09□□□□□ -1.91
SCN3A-209ENST00000639244 Q8N3U1 123 aa3.09□□□□□ -1.91
SCN3A-209ENST00000639244 CCL3L1P16619 93 aa3.09□□□□□ -1.91
SCN3A-209ENST00000639244 FHL1Q13642 323 aa3.09□□□□□ -1.91
SCN3A-209ENST00000639244 ZNF625Q96I27 306 aaPredicted RBP3.09□□□□□ -1.92
SCN3A-209ENST00000639244 CHD8Q9HCK8 2581 aa3.09□□□□□ -1.92
SCN3A-209ENST00000639244 TSPEAR-AS2P59090 65 aa3.09□□□□□ -1.92
SCN3A-209ENST00000639244 C1orf64Q8NEQ6 169 aa3.09□□□□□ -1.92
SCN3A-209ENST00000639244 PMS2P5A8MQ11 134 aa3.08□□□□□ -1.92
SCN3A-209ENST00000639244 PSCAO43653 123 aa3.08□□□□□ -1.92
SCN3A-209ENST00000639244 FGF23Q9GZV9 251 aaPredicted RBP3.08□□□□□ -1.92
SCN3A-209ENST00000639244 IGLV3-12A0A075B6K2 115 aa3.08□□□□□ -1.92
SCN3A-209ENST00000639244 TRBV6-1A0A0K0K1D8 114 aa3.08□□□□□ -1.92
SCN3A-209ENST00000639244 KRTAP16-1A8MUX0 517 aa3.08□□□□□ -1.92
SCN3A-209ENST00000639244 Q6ZSV7 163 aa3.08□□□□□ -1.92
SCN3A-209ENST00000639244 IGKV2-40A0A087WW87 121 aaPredicted RBP3.08□□□□□ -1.92
SCN3A-209ENST00000639244 IGKV2D-40P01614 121 aaPredicted RBP3.08□□□□□ -1.92
SCN3A-209ENST00000639244 LMO4P61968 165 aa3.08□□□□□ -1.92
SCN3A-209ENST00000639244 CCL19Q99731 98 aa3.08□□□□□ -1.92
SCN3A-209ENST00000639244 CNFNQ9BYD5 112 aa3.08□□□□□ -1.92
SCN3A-209ENST00000639244 LRCOL1A6NCL2 159 aa3.08□□□□□ -1.92
SCN3A-209ENST00000639244 Q5VV11 94 aa3.08□□□□□ -1.92
SCN3A-209ENST00000639244 DSPP15924 2871 aaKnown RBP3.08□□□□□ -1.92
SCN3A-209ENST00000639244 NDPQ00604 133 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms