RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 BAGE2Q86Y30 109 aa-4.17□□□□□ -3.08
LMBR1-222ENST00000638959 WFDC13Q8IUB5 93 aa-4.17□□□□□ -3.08
LMBR1-222ENST00000638959 ARMC1Q9NVT9 282 aa-4.17□□□□□ -3.08
LMBR1-222ENST00000638959 NKIRAS1Q9NYS0 192 aa-4.17□□□□□ -3.08
LMBR1-222ENST00000638959 SS18L2Q9UHA2 77 aa-4.17□□□□□ -3.08
LMBR1-222ENST00000638959 LAMTOR2Q9Y2Q5 125 aa-4.17□□□□□ -3.08
LMBR1-222ENST00000638959 V9GYH0 126 aa-4.17□□□□□ -3.08
LMBR1-222ENST00000638959 KIF21AQ7Z4S6 1674 aa-4.17□□□□□ -3.08
LMBR1-222ENST00000638959 LRBAP50851 2863 aa-4.17□□□□□ -3.08
LMBR1-222ENST00000638959 TRRAPQ9Y4A5 3859 aa-4.18□□□□□ -3.08
LMBR1-222ENST00000638959 DCUN1D2Q6PH85 259 aa-4.18□□□□□ -3.08
LMBR1-222ENST00000638959 SMIM23A6NLE4 172 aa-4.19□□□□□ -3.08
LMBR1-222ENST00000638959 UQCR11O14957 56 aa-4.19□□□□□ -3.08
LMBR1-222ENST00000638959 APOC3P02656 99 aa-4.19□□□□□ -3.08
LMBR1-222ENST00000638959 RBP4P02753 201 aa-4.19□□□□□ -3.08
LMBR1-222ENST00000638959 CST2P09228 141 aa-4.19□□□□□ -3.08
LMBR1-222ENST00000638959 UBE2G1P62253 170 aa-4.19□□□□□ -3.08
LMBR1-222ENST00000638959 MRPL40Q9NQ50 206 aaKnown RBP-4.19□□□□□ -3.08
LMBR1-222ENST00000638959 CDC42SE2Q9NRR3 84 aa-4.19□□□□□ -3.08
LMBR1-222ENST00000638959 MYO9AB2RTY4 2548 aa-4.2□□□□□ -3.08
LMBR1-222ENST00000638959 I3L3M4 83 aa-4.2□□□□□ -3.08
LMBR1-222ENST00000638959 PSPHP78330 225 aa-4.2□□□□□ -3.08
LMBR1-222ENST00000638959 LELP1Q5T871 98 aa-4.2□□□□□ -3.08
LMBR1-222ENST00000638959 SPTSSBQ8NFR3 76 aa-4.2□□□□□ -3.08
LMBR1-222ENST00000638959 DNAJC15Q9Y5T4 150 aa-4.2□□□□□ -3.08
LMBR1-222ENST00000638959 A2MP01023 1474 aa-4.2□□□□□ -3.08
LMBR1-222ENST00000638959 NKTRP30414 1462 aaKnown RBP-4.2□□□□□ -3.08
LMBR1-222ENST00000638959 TRAV30A0A087WSZ9 112 aa-4.21□□□□□ -3.08
LMBR1-222ENST00000638959 ATG12O94817 140 aa-4.21□□□□□ -3.08
LMBR1-222ENST00000638959 RPL7P18124 248 aaKnown RBP-4.21□□□□□ -3.08
LMBR1-222ENST00000638959 SPANXN1Q5VSR9 72 aa-4.21□□□□□ -3.08
LMBR1-222ENST00000638959 MAP3K1Q13233 1512 aa-4.21□□□□□ -3.08
LMBR1-222ENST00000638959 ZFHX3Q15911 3703 aa-4.22□□□□□ -3.08
LMBR1-222ENST00000638959 PXDNQ92626 1479 aa-4.22□□□□□ -3.08
LMBR1-222ENST00000638959 MT1EP04732 61 aa-4.22□□□□□ -3.08
LMBR1-222ENST00000638959 TPPP2P59282 170 aa-4.22□□□□□ -3.08
LMBR1-222ENST00000638959 DYDC1Q8WWB3 177 aa-4.22□□□□□ -3.08
LMBR1-222ENST00000638959 CDKN2A-AS1Q9UH64 79 aa-4.22□□□□□ -3.08
LMBR1-222ENST00000638959 RPS28P62857 69 aaKnown RBP-4.23□□□□□ -3.09
LMBR1-222ENST00000638959 KRTAP20-1Q3LI63 56 aa-4.23□□□□□ -3.09
LMBR1-222ENST00000638959 YPEL1O60688 119 aa-4.24□□□□□ -3.09
LMBR1-222ENST00000638959 C10orf113Q5VZT2 155 aa-4.24□□□□□ -3.09
LMBR1-222ENST00000638959 DNAH5Q8TE73 4624 aa-4.24□□□□□ -3.09
LMBR1-222ENST00000638959 DNAH17Q9UFH2 4485 aa-4.25□□□□□ -3.09
LMBR1-222ENST00000638959 ITPR2Q14571 2701 aa-4.25□□□□□ -3.09
LMBR1-222ENST00000638959 TRBV7-3A0A075B6L6 115 aa-4.25□□□□□ -3.09
LMBR1-222ENST00000638959 MT1GP13640 62 aa-4.25□□□□□ -3.09
LMBR1-222ENST00000638959 BTG2P78543 158 aa-4.25□□□□□ -3.09
LMBR1-222ENST00000638959 TMED4Q7Z7H5 227 aa-4.25□□□□□ -3.09
LMBR1-222ENST00000638959 FDCSPQ8NFU4 85 aa-4.25□□□□□ -3.09
LMBR1-222ENST00000638959 TMEM263Q8WUH6 116 aaKnown RBP-4.25□□□□□ -3.09
LMBR1-222ENST00000638959 YTHDC2Q9H6S0 1430 aaKnown RBP-4.25□□□□□ -3.09
LMBR1-222ENST00000638959 BPTFQ12830 3046 aa-4.25□□□□□ -3.09
LMBR1-222ENST00000638959 DYNC2H1Q8NCM8 4307 aaKnown RBP-4.25□□□□□ -3.09
LMBR1-222ENST00000638959 KDM5CP41229 1560 aa-4.26□□□□□ -3.09
LMBR1-222ENST00000638959 DISP2A7MBM2 1401 aa-4.26□□□□□ -3.09
LMBR1-222ENST00000638959 CLLU1Q5K131 121 aa-4.26□□□□□ -3.09
LMBR1-222ENST00000638959 FAM24BQ8N5W8 94 aa-4.26□□□□□ -3.09
LMBR1-222ENST00000638959 SELENOSQ9BQE4 189 aa-4.26□□□□□ -3.09
LMBR1-222ENST00000638959 CMPK1P30085 196 aa-4.27□□□□□ -3.09
LMBR1-222ENST00000638959 CEBPGP53567 150 aa-4.27□□□□□ -3.09
LMBR1-222ENST00000638959 CCL8P80075 99 aa-4.27□□□□□ -3.09
LMBR1-222ENST00000638959 OR13C6PQ8NH95 151 aa-4.27□□□□□ -3.09
LMBR1-222ENST00000638959 LENEPQ9Y5L5 61 aa-4.27□□□□□ -3.09
LMBR1-222ENST00000638959 CCDC141Q6ZP82 1450 aa-4.27□□□□□ -3.09
LMBR1-222ENST00000638959 RAPGEF6Q8TEU7 1601 aa-4.28□□□□□ -3.09
LMBR1-222ENST00000638959 B2MP61769 119 aa-4.28□□□□□ -3.09
LMBR1-222ENST00000638959 MT1LQ93083 61 aa-4.28□□□□□ -3.09
LMBR1-222ENST00000638959 GINS3Q9BRX5 216 aa-4.28□□□□□ -3.09
LMBR1-222ENST00000638959 MED31Q9Y3C7 131 aa-4.28□□□□□ -3.09
LMBR1-222ENST00000638959 ATP6V1DQ9Y5K8 247 aa-4.28□□□□□ -3.09
LMBR1-222ENST00000638959 BCORQ6W2J9 1755 aa-4.28□□□□□ -3.09
LMBR1-222ENST00000638959 PCF11O94913 1555 aaKnown RBP-4.28□□□□□ -3.09
LMBR1-222ENST00000638959 FGF7P21781 194 aa-4.29□□□□□ -3.1
LMBR1-222ENST00000638959 TRAPPC2LQ9UL33 140 aa-4.29□□□□□ -3.1
LMBR1-222ENST00000638959 LINC01558Q9Y6Z2 57 aa-4.29□□□□□ -3.1
LMBR1-222ENST00000638959 MARF1Q9Y4F3 1742 aaKnown RBP-4.29□□□□□ -3.1
LMBR1-222ENST00000638959 E7EQ34 232 aa-4.3□□□□□ -3.1
LMBR1-222ENST00000638959 HLA-DRB4P13762 266 aa-4.3□□□□□ -3.1
LMBR1-222ENST00000638959 STX12Q86Y82 276 aa-4.3□□□□□ -3.1
LMBR1-222ENST00000638959 MT1MQ8N339 61 aa-4.3□□□□□ -3.1
LMBR1-222ENST00000638959 PRAP1Q96NZ9 151 aa-4.3□□□□□ -3.1
LMBR1-222ENST00000638959 HIGD1BQ9P298 99 aa-4.3□□□□□ -3.1
LMBR1-222ENST00000638959 ARL2BPQ9Y2Y0 163 aa-4.3□□□□□ -3.1
LMBR1-222ENST00000638959 HLA-DRB4X5D2U9 266 aa-4.3□□□□□ -3.1
LMBR1-222ENST00000638959 TLN2Q9Y4G6 2542 aa-4.3□□□□□ -3.1
LMBR1-222ENST00000638959 CCL22O00626 93 aa-4.31□□□□□ -3.1
LMBR1-222ENST00000638959 MT1BP07438 61 aa-4.31□□□□□ -3.1
LMBR1-222ENST00000638959 C10orf128Q5T292 105 aa-4.31□□□□□ -3.1
LMBR1-222ENST00000638959 ATP6V1G3Q96LB4 118 aa-4.31□□□□□ -3.1
LMBR1-222ENST00000638959 LINC01600Q96MT4 127 aa-4.31□□□□□ -3.1
LMBR1-222ENST00000638959 MRPL34Q9BQ48 92 aaKnown RBP-4.31□□□□□ -3.1
LMBR1-222ENST00000638959 ERCC6Q03468 1493 aa-4.31□□□□□ -3.1
LMBR1-222ENST00000638959 DNAH10Q8IVF4 4471 aa-4.31□□□□□ -3.1
LMBR1-222ENST00000638959 NWD2Q9ULI1 1742 aa-4.32□□□□□ -3.1
LMBR1-222ENST00000638959 SMIM24O75264 130 aa-4.32□□□□□ -3.1
LMBR1-222ENST00000638959 CBLN1P23435 193 aa-4.32□□□□□ -3.1
LMBR1-222ENST00000638959 CCL7P80098 99 aa-4.32□□□□□ -3.1
LMBR1-222ENST00000638959 ZCCHC11Q5TAX3 1644 aaKnown RBP-4.32□□□□□ -3.1
LMBR1-222ENST00000638959 MYH3P11055 1940 aa-4.33□□□□□ -3.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms