RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	NTM-AS1	Q6ZSK4	140 aa		6.38	□□□□□ -1.39
CACNA1A-256	ENST00000637981	NIT1	Q86X76	327 aa		6.38	□□□□□ -1.39
CACNA1A-256	ENST00000637981	FAM229A	H3BQW9	127 aa		6.37	□□□□□ -1.39
CACNA1A-256	ENST00000637981	KIAA1644	Q3SXP7	199 aa		6.37	□□□□□ -1.39
CACNA1A-256	ENST00000637981		Q8N8P6	123 aa		6.37	□□□□□ -1.39
CACNA1A-256	ENST00000637981	TMA7	Q9Y2S6	64 aa	Known RBP	6.37	□□□□□ -1.39
CACNA1A-256	ENST00000637981		A0A087WTM6	91 aa		6.36	□□□□□ -1.39
CACNA1A-256	ENST00000637981	LOC389332	A0A1B0GUA5	103 aa		6.36	□□□□□ -1.39
CACNA1A-256	ENST00000637981		A0A1B0GUV1	79 aa		6.36	□□□□□ -1.39
CACNA1A-256	ENST00000637981	TSHB	P01222	138 aa		6.36	□□□□□ -1.39
CACNA1A-256	ENST00000637981	LAGE3	Q14657	143 aa		6.36	□□□□□ -1.39
CACNA1A-256	ENST00000637981	ORMDL2	Q53FV1	153 aa		6.36	□□□□□ -1.39
CACNA1A-256	ENST00000637981	AMMECR1L	Q6DCA0	310 aa		6.36	□□□□□ -1.39
CACNA1A-256	ENST00000637981	NFE4	Q86UQ8	179 aa		6.36	□□□□□ -1.39
CACNA1A-256	ENST00000637981	PRSS3P2	Q8NHM4	247 aa		6.36	□□□□□ -1.39
CACNA1A-256	ENST00000637981	ALKBH7	Q9BT30	221 aa	Predicted RBP	6.36	□□□□□ -1.39
CACNA1A-256	ENST00000637981	MYCBP2	O75592	4640 aa		6.36	□□□□□ -1.39
CACNA1A-256	ENST00000637981	FAT1	Q14517	4588 aa		6.35	□□□□□ -1.39
CACNA1A-256	ENST00000637981	TRAV8-3	A0A0A6YYJ7	113 aa		6.35	□□□□□ -1.39
CACNA1A-256	ENST00000637981	LINC01549	A6NIU2	74 aa		6.35	□□□□□ -1.39
CACNA1A-256	ENST00000637981	IGHV3-30	P01768	117 aa		6.35	□□□□□ -1.39
CACNA1A-256	ENST00000637981	IGHV3-33	P01772	117 aa		6.35	□□□□□ -1.39
CACNA1A-256	ENST00000637981	IGHV3-30-3	P0DP02	117 aa		6.35	□□□□□ -1.39
CACNA1A-256	ENST00000637981	IGHV3-30-5	P0DP03	117 aa		6.35	□□□□□ -1.39
CACNA1A-256	ENST00000637981	ESD	P10768	282 aa		6.35	□□□□□ -1.39
CACNA1A-256	ENST00000637981	ZNF25	P17030	456 aa	Predicted RBP	6.35	□□□□□ -1.39
CACNA1A-256	ENST00000637981	GCSH	P23434	173 aa		6.35	□□□□□ -1.39
CACNA1A-256	ENST00000637981	RAB5B	P61020	215 aa		6.35	□□□□□ -1.39
CACNA1A-256	ENST00000637981	HAMP	P81172	84 aa		6.35	□□□□□ -1.39
CACNA1A-256	ENST00000637981	GAGE6	Q13070	117 aa		6.35	□□□□□ -1.39
CACNA1A-256	ENST00000637981	TMEM101	Q96IK0	257 aa		6.35	□□□□□ -1.39
CACNA1A-256	ENST00000637981	COLCA2	A8K830	154 aa		6.34	□□□□□ -1.39
CACNA1A-256	ENST00000637981	IBA57-AS1	B1ANH7	110 aa		6.34	□□□□□ -1.39
CACNA1A-256	ENST00000637981	CRP	P02741	224 aa		6.34	□□□□□ -1.39
CACNA1A-256	ENST00000637981	ANG	P03950	147 aa	Known RBP	6.34	□□□□□ -1.39
CACNA1A-256	ENST00000637981		Q0VG73	95 aa		6.34	□□□□□ -1.39
CACNA1A-256	ENST00000637981	LCE3B	Q5TA77	95 aa		6.34	□□□□□ -1.39
CACNA1A-256	ENST00000637981	DGAT2L7P	Q6IED9	249 aa		6.34	□□□□□ -1.39
CACNA1A-256	ENST00000637981	RNASEK	Q6P5S7	137 aa	Known RBP	6.34	□□□□□ -1.39
CACNA1A-256	ENST00000637981	DEFB104A	Q8WTQ1	72 aa		6.34	□□□□□ -1.39
CACNA1A-256	ENST00000637981	RMI2	Q96E14	147 aa		6.34	□□□□□ -1.39
CACNA1A-256	ENST00000637981	VPS13B	Q7Z7G8	4022 aa		6.34	□□□□□ -1.39
CACNA1A-256	ENST00000637981	FLG2	Q5D862	2391 aa	Predicted RBP	6.34	□□□□□ -1.39
CACNA1A-256	ENST00000637981	SCO1	O75880	301 aa		6.33	□□□□□ -1.4
CACNA1A-256	ENST00000637981	FGF6	P10767	208 aa		6.33	□□□□□ -1.4
CACNA1A-256	ENST00000637981	IFI27	P40305	119 aa	Predicted RBP	6.33	□□□□□ -1.4
CACNA1A-256	ENST00000637981	RBX1	P62877	108 aa		6.33	□□□□□ -1.4
CACNA1A-256	ENST00000637981	MPV17L2	Q567V2	206 aa		6.33	□□□□□ -1.4
CACNA1A-256	ENST00000637981	FA2H	Q7L5A8	372 aa		6.33	□□□□□ -1.4
CACNA1A-256	ENST00000637981	MRPL52	Q86TS9	123 aa	Known RBP	6.33	□□□□□ -1.4
CACNA1A-256	ENST00000637981	C20orf203	Q8NBC4	194 aa		6.33	□□□□□ -1.4
CACNA1A-256	ENST00000637981	OR5A1	Q8NGJ0	315 aa		6.33	□□□□□ -1.4
CACNA1A-256	ENST00000637981	TIMM21	Q9BVV7	248 aa		6.33	□□□□□ -1.4
CACNA1A-256	ENST00000637981	TM2D2	Q9BX73	214 aa		6.33	□□□□□ -1.4
CACNA1A-256	ENST00000637981	KLK12	Q9UKR0	248 aa		6.33	□□□□□ -1.4
CACNA1A-256	ENST00000637981	CSDC2	Q9Y534	153 aa	Known RBP	6.33	□□□□□ -1.4
CACNA1A-256	ENST00000637981	COX11	Q9Y6N1	276 aa		6.33	□□□□□ -1.4
CACNA1A-256	ENST00000637981	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	6.32	□□□□□ -1.4
CACNA1A-256	ENST00000637981	IGKV2-29	A2NJV5	120 aa	Predicted RBP	6.32	□□□□□ -1.4
CACNA1A-256	ENST00000637981	TRGC2	P03986	189 aa		6.32	□□□□□ -1.4
CACNA1A-256	ENST00000637981	KRTAP4-12	Q9BQ66	201 aa		6.32	□□□□□ -1.4
CACNA1A-256	ENST00000637981	SPANXA1	Q9NS26	97 aa		6.32	□□□□□ -1.4
CACNA1A-256	ENST00000637981	CYSLTR1	Q9Y271	337 aa		6.32	□□□□□ -1.4
CACNA1A-256	ENST00000637981	MIA	Q16674	131 aa		6.31	□□□□□ -1.4
CACNA1A-256	ENST00000637981		Q8N976	141 aa		6.31	□□□□□ -1.4
CACNA1A-256	ENST00000637981	C18orf32	Q8TCD1	76 aa		6.31	□□□□□ -1.4
CACNA1A-256	ENST00000637981	UBE2W	Q96B02	151 aa		6.31	□□□□□ -1.4
CACNA1A-256	ENST00000637981	AP5S1	Q9NUS5	200 aa		6.31	□□□□□ -1.4
CACNA1A-256	ENST00000637981	IGLV5-52	A0A0A0MRZ9	124 aa		6.3	□□□□□ -1.4
CACNA1A-256	ENST00000637981	TRAV8-4	A0A0B4J246	113 aa		6.3	□□□□□ -1.4
CACNA1A-256	ENST00000637981	LINC01546	A6NGU7	62 aa		6.3	□□□□□ -1.4
CACNA1A-256	ENST00000637981	NPS	P0C0P6	89 aa		6.3	□□□□□ -1.4
CACNA1A-256	ENST00000637981	LINC00614	P0C842	121 aa		6.3	□□□□□ -1.4
CACNA1A-256	ENST00000637981	REG3A	Q06141	175 aa		6.3	□□□□□ -1.4
CACNA1A-256	ENST00000637981	PAPPA-AS1	Q5QFB9	102 aa		6.3	□□□□□ -1.4
CACNA1A-256	ENST00000637981	PYGO1	Q9Y3Y4	419 aa		6.3	□□□□□ -1.4
CACNA1A-256	ENST00000637981	IGLV4-60	A0A075B6I1	120 aa		6.29	□□□□□ -1.4
CACNA1A-256	ENST00000637981	TMEM238L	A0A1B0GVL6	79 aa		6.29	□□□□□ -1.4
CACNA1A-256	ENST00000637981	CCL25	O15444	150 aa		6.29	□□□□□ -1.4
CACNA1A-256	ENST00000637981	PSCA	O43653	123 aa		6.29	□□□□□ -1.4
CACNA1A-256	ENST00000637981	C2orf66	Q6UXQ4	117 aa		6.29	□□□□□ -1.4
CACNA1A-256	ENST00000637981	BAGE3	Q86Y29	109 aa		6.29	□□□□□ -1.4
CACNA1A-256	ENST00000637981	LINC00269	Q8N2A0	174 aa		6.29	□□□□□ -1.4
CACNA1A-256	ENST00000637981	ZNF664	Q8N3J9	261 aa		6.29	□□□□□ -1.4
CACNA1A-256	ENST00000637981	CHCHD1	Q96BP2	118 aa	Known RBP	6.29	□□□□□ -1.4
CACNA1A-256	ENST00000637981	C1orf43	Q9BWL3	253 aa		6.29	□□□□□ -1.4
CACNA1A-256	ENST00000637981		Q9HAA7	133 aa		6.29	□□□□□ -1.4
CACNA1A-256	ENST00000637981	PRR34	Q9NV39	138 aa		6.29	□□□□□ -1.4
CACNA1A-256	ENST00000637981	UBE2D4	Q9Y2X8	147 aa		6.29	□□□□□ -1.4
CACNA1A-256	ENST00000637981	SRRM2	Q9UQ35	2752 aa	Known RBP	6.29	□□□□□ -1.4
CACNA1A-256	ENST00000637981	IGKV2D-24	A0A075B6R9	120 aa		6.28	□□□□□ -1.4
CACNA1A-256	ENST00000637981	KRTAP29-1	A8MX34	341 aa	Predicted RBP	6.28	□□□□□ -1.4
CACNA1A-256	ENST00000637981	RPL39	P62891	51 aa	Known RBP	6.28	□□□□□ -1.4
CACNA1A-256	ENST00000637981	MRPS36	P82909	103 aa	Known RBP	6.28	□□□□□ -1.4
CACNA1A-256	ENST00000637981		Q6ZN92	141 aa		6.28	□□□□□ -1.4
CACNA1A-256	ENST00000637981	CDC42SE2	Q9NRR3	84 aa		6.28	□□□□□ -1.4
CACNA1A-256	ENST00000637981	SS18	Q15532	418 aa		6.27	□□□□□ -1.41
CACNA1A-256	ENST00000637981	ENHO	Q6UWT2	76 aa		6.27	□□□□□ -1.41
CACNA1A-256	ENST00000637981	ERAS	Q7Z444	233 aa		6.27	□□□□□ -1.41
CACNA1A-256	ENST00000637981	NTN5	Q8WTR8	489 aa	Predicted RBP	6.27	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms