RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 SLPIP03973 132 aa4.63□□□□□ -1.67
SCN1A-212ENST00000636194 LOC107984640A0A0U1RRK4 108 aa4.63□□□□□ -1.67
SCN1A-212ENST00000636194 ZFAND2AQ8N6M9 145 aa4.63□□□□□ -1.67
SCN1A-212ENST00000636194 SPRY4Q9C004 299 aa4.63□□□□□ -1.67
SCN1A-212ENST00000636194 EPOPA6NHQ4 379 aa4.63□□□□□ -1.67
SCN1A-212ENST00000636194 RPL39LQ96EH5 51 aaKnown RBP4.63□□□□□ -1.67
SCN1A-212ENST00000636194 IMUPQ9GZP8 106 aa4.63□□□□□ -1.67
SCN1A-212ENST00000636194 LTBP1Q14766 1721 aa4.63□□□□□ -1.67
SCN1A-212ENST00000636194 hDV103S1A0JD37 113 aa4.63□□□□□ -1.67
SCN1A-212ENST00000636194 IBA57-AS1B1ANH7 110 aa4.63□□□□□ -1.67
SCN1A-212ENST00000636194 LY6G6CO95867 125 aa4.63□□□□□ -1.67
SCN1A-212ENST00000636194 ATRAIDQ6UW56 229 aa4.63□□□□□ -1.67
SCN1A-212ENST00000636194 SHISA2Q6UWI4 295 aa4.63□□□□□ -1.67
SCN1A-212ENST00000636194 C7orf65Q6ZTY9 151 aa4.62□□□□□ -1.67
SCN1A-212ENST00000636194 E9PLD3 99 aa4.62□□□□□ -1.67
SCN1A-212ENST00000636194 IGLC1P0CG04 106 aa4.62□□□□□ -1.67
SCN1A-212ENST00000636194 WT1P19544 449 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-212ENST00000636194 MDFICQ9P1T7 246 aa4.62□□□□□ -1.67
SCN1A-212ENST00000636194 TRBV6-1A0A0K0K1D8 114 aa4.62□□□□□ -1.67
SCN1A-212ENST00000636194 TRBV30A0A0K0K1B3 111 aa4.62□□□□□ -1.67
SCN1A-212ENST00000636194 PPDPFQ9H3Y8 114 aa4.62□□□□□ -1.67
SCN1A-212ENST00000636194 CELA1Q9UNI1 258 aa4.62□□□□□ -1.67
SCN1A-212ENST00000636194 WISP3O95389 354 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-212ENST00000636194 C4orf51C9J302 202 aa4.61□□□□□ -1.67
SCN1A-212ENST00000636194 RETNLBQ9BQ08 111 aa4.61□□□□□ -1.67
SCN1A-212ENST00000636194 CYYR1Q96J86 154 aa4.61□□□□□ -1.67
SCN1A-212ENST00000636194 IGHV7-81A0A0B4J1V7 117 aa4.61□□□□□ -1.67
SCN1A-212ENST00000636194 TGFBR3LH3BV60 316 aa4.61□□□□□ -1.67
SCN1A-212ENST00000636194 IGLC6P0CF74 106 aa4.61□□□□□ -1.67
SCN1A-212ENST00000636194 Q6ZRM9 215 aa4.61□□□□□ -1.67
SCN1A-212ENST00000636194 CHCHD10Q8WYQ3 142 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-212ENST00000636194 ZNF747Q9BV97 191 aa4.61□□□□□ -1.67
SCN1A-212ENST00000636194 DEFB4AO15263 64 aa4.61□□□□□ -1.67
SCN1A-212ENST00000636194 LST1O00453 97 aa4.61□□□□□ -1.67
SCN1A-212ENST00000636194 SYCNQ0VAF6 134 aa4.61□□□□□ -1.67
SCN1A-212ENST00000636194 PLAC8L1A1L4L8 177 aa4.6□□□□□ -1.67
SCN1A-212ENST00000636194 PINLYPA6NC86 204 aa4.6□□□□□ -1.67
SCN1A-212ENST00000636194 WIPF3A6NGB9 483 aa4.6□□□□□ -1.67
SCN1A-212ENST00000636194 PATE2Q6UY27 113 aa4.6□□□□□ -1.67
SCN1A-212ENST00000636194 CHD8Q9HCK8 2581 aa4.6□□□□□ -1.67
SCN1A-212ENST00000636194 C19orf71A6NCJ1 209 aa4.6□□□□□ -1.67
SCN1A-212ENST00000636194 NDUFA7O95182 113 aa4.6□□□□□ -1.67
SCN1A-212ENST00000636194 LINC01554Q52M75 96 aa4.6□□□□□ -1.67
SCN1A-212ENST00000636194 CSNK1G2-AS1Q8NCQ2 148 aa4.6□□□□□ -1.67
SCN1A-212ENST00000636194 SMIM26A0A096LP01 95 aa4.6□□□□□ -1.67
SCN1A-212ENST00000636194 P0C879 139 aa4.6□□□□□ -1.67
SCN1A-212ENST00000636194 CXCL6P80162 114 aa4.6□□□□□ -1.67
SCN1A-212ENST00000636194 WT1-ASQ06250 92 aa4.6□□□□□ -1.67
SCN1A-212ENST00000636194 ANKRD11Q6UB99 2663 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-212ENST00000636194 A0A0J9YXV3 536 aa4.59□□□□□ -1.67
SCN1A-212ENST00000636194 M0QXV9 152 aa4.59□□□□□ -1.67
SCN1A-212ENST00000636194 PSPHP1O15172 72 aa4.59□□□□□ -1.67
SCN1A-212ENST00000636194 M0R378 163 aa4.59□□□□□ -1.67
SCN1A-212ENST00000636194 AGPAT4-IT1Q9H0P7 198 aa4.59□□□□□ -1.67
SCN1A-212ENST00000636194 IGKV2-28A0A075B6P5 120 aa4.59□□□□□ -1.67
SCN1A-212ENST00000636194 IGKV2D-28P01615 120 aa4.59□□□□□ -1.67
SCN1A-212ENST00000636194 CRYGAP11844 174 aa4.59□□□□□ -1.67
SCN1A-212ENST00000636194 LUZP6Q538Z0 58 aa4.59□□□□□ -1.67
SCN1A-212ENST00000636194 ARTNQ5T4W7 220 aa4.59□□□□□ -1.67
SCN1A-212ENST00000636194 Q6JHZ5 121 aa4.59□□□□□ -1.67
SCN1A-212ENST00000636194 ODF3Q96PU9 254 aa4.59□□□□□ -1.67
SCN1A-212ENST00000636194 A0A1B0GU69 56 aa4.59□□□□□ -1.67
SCN1A-212ENST00000636194 EBI3Q14213 229 aa4.59□□□□□ -1.67
SCN1A-212ENST00000636194 IGHV6-1A0A0B4J1U7 121 aa4.59□□□□□ -1.67
SCN1A-212ENST00000636194 A0A0J9YXY3 114 aa4.59□□□□□ -1.67
SCN1A-212ENST00000636194 IGLV4-69A0A075B6H9 119 aa4.59□□□□□ -1.68
SCN1A-212ENST00000636194 LOC100131303A0A0U1RQF7 123 aa4.59□□□□□ -1.68
SCN1A-212ENST00000636194 CTSZQ9UBR2 303 aa4.59□□□□□ -1.68
SCN1A-212ENST00000636194 C17orf58Q2M2W7 97 aa4.58□□□□□ -1.68
SCN1A-212ENST00000636194 M0R2N4 97 aa4.58□□□□□ -1.68
SCN1A-212ENST00000636194 RNASE3P12724 160 aaKnown RBP4.58□□□□□ -1.68
SCN1A-212ENST00000636194 PTH2Q96A98 100 aa4.58□□□□□ -1.68
SCN1A-212ENST00000636194 SSBP3-AS1Q7Z2R9 100 aa4.58□□□□□ -1.68
SCN1A-212ENST00000636194 PYGO1Q9Y3Y4 419 aa4.58□□□□□ -1.68
SCN1A-212ENST00000636194 IGLV5-52A0A0A0MRZ9 124 aa4.58□□□□□ -1.68
SCN1A-212ENST00000636194 C8orf87E5RJ46 101 aa4.58□□□□□ -1.68
SCN1A-212ENST00000636194 FOXL2NBQ6ZUU3 175 aa4.58□□□□□ -1.68
SCN1A-212ENST00000636194 CRIPAKQ8N1N5 446 aa4.58□□□□□ -1.68
SCN1A-212ENST00000636194 DNAJC9-AS1A6NH13 148 aa4.58□□□□□ -1.68
SCN1A-212ENST00000636194 RPL39P62891 51 aaKnown RBP4.58□□□□□ -1.68
SCN1A-212ENST00000636194 CRIPTQ9P021 101 aa4.58□□□□□ -1.68
SCN1A-212ENST00000636194 BPTFQ12830 3046 aa4.57□□□□□ -1.68
SCN1A-212ENST00000636194 ZFP36P26651 326 aaKnown RBP4.57□□□□□ -1.68
SCN1A-212ENST00000636194 DAZAP2Q15038 168 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-212ENST00000636194 BEAN1Q3B7T3 259 aa4.57□□□□□ -1.68
SCN1A-212ENST00000636194 LINC00208Q96KT6 92 aa4.57□□□□□ -1.68
SCN1A-212ENST00000636194 MLANAQ16655 118 aa4.57□□□□□ -1.68
SCN1A-212ENST00000636194 SBSPONQ8IVN8 264 aa4.57□□□□□ -1.68
SCN1A-212ENST00000636194 IGLV2-18A0A075B6J9 118 aa4.57□□□□□ -1.68
SCN1A-212ENST00000636194 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.56□□□□□ -1.68
SCN1A-212ENST00000636194 Q6ZSR3 168 aa4.56□□□□□ -1.68
SCN1A-212ENST00000636194 WFDC2Q14508 124 aa4.56□□□□□ -1.68
SCN1A-212ENST00000636194 KIAA0087Q14695 138 aa4.56□□□□□ -1.68
SCN1A-212ENST00000636194 C22orf34Q6ZV56 151 aa4.56□□□□□ -1.68
SCN1A-212ENST00000636194 K7EN84 100 aa4.56□□□□□ -1.68
SCN1A-212ENST00000636194 TRBV6-5A0A0K0K1A5 114 aa4.55□□□□□ -1.68
SCN1A-212ENST00000636194 ZNF726P1Q15940 193 aa4.55□□□□□ -1.68
SCN1A-212ENST00000636194 IGKV2D-30A0A075B6S6 120 aa4.55□□□□□ -1.68
SCN1A-212ENST00000636194 IGKV2-30P06310 120 aa4.55□□□□□ -1.68
SCN1A-212ENST00000636194 REG3GQ6UW15 175 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms