RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 UNQ9165/PRO28630Q6UXU0 137 aa4.19□□□□□ -1.74
SCN1A-209ENST00000635750 FAM19A3Q7Z5A8 133 aa4.18□□□□□ -1.74
SCN1A-209ENST00000635750 LINC00467Q9BRT7 94 aa4.18□□□□□ -1.74
SCN1A-209ENST00000635750 PRR4Q16378 134 aa4.18□□□□□ -1.74
SCN1A-209ENST00000635750 LYPD6Q86Y78 171 aa4.18□□□□□ -1.74
SCN1A-209ENST00000635750 SPRY4Q9C004 299 aa4.18□□□□□ -1.74
SCN1A-209ENST00000635750 XAGE1AQ9HD64 81 aa4.18□□□□□ -1.74
SCN1A-209ENST00000635750 COX17Q14061 63 aa4.18□□□□□ -1.74
SCN1A-209ENST00000635750 FBXL19-AS1Q494R0 122 aa4.18□□□□□ -1.74
SCN1A-209ENST00000635750 TMEM223A0PJW6 202 aa4.18□□□□□ -1.74
SCN1A-209ENST00000635750 LELP1Q5T871 98 aa4.18□□□□□ -1.74
SCN1A-209ENST00000635750 TRBV6-4A0A1B0GX49 114 aa4.18□□□□□ -1.74
SCN1A-209ENST00000635750 WFDC13Q8IUB5 93 aa4.18□□□□□ -1.74
SCN1A-209ENST00000635750 ALPK3Q96L96 1907 aa4.18□□□□□ -1.74
SCN1A-209ENST00000635750 ODF3BA8MYP8 253 aa4.18□□□□□ -1.74
SCN1A-209ENST00000635750 UQCRQO14949 82 aa4.18□□□□□ -1.74
SCN1A-209ENST00000635750 WFDC2Q14508 124 aa4.18□□□□□ -1.74
SCN1A-209ENST00000635750 Q8N7P7 452 aa4.18□□□□□ -1.74
SCN1A-209ENST00000635750 A0A0J9YXY3 114 aa4.17□□□□□ -1.74
SCN1A-209ENST00000635750 DCANP1Q8TF63 244 aa4.17□□□□□ -1.74
SCN1A-209ENST00000635750 ZFAND3Q9H8U3 227 aa4.17□□□□□ -1.74
SCN1A-209ENST00000635750 FXYD2P54710 66 aa4.17□□□□□ -1.74
SCN1A-209ENST00000635750 CEMP1Q6PRD7 247 aaPredicted RBP4.17□□□□□ -1.74
SCN1A-209ENST00000635750 RPL37AP8A6NKH3 93 aa4.17□□□□□ -1.74
SCN1A-209ENST00000635750 LINC00482Q8N8I6 264 aa4.17□□□□□ -1.74
SCN1A-209ENST00000635750 IGLV3-1P01715 115 aa4.17□□□□□ -1.74
SCN1A-209ENST00000635750 A0A0U1RQV1 116 aa4.17□□□□□ -1.74
SCN1A-209ENST00000635750 ESRGQ1W209 222 aa4.17□□□□□ -1.74
SCN1A-209ENST00000635750 CD164L2Q6UWJ8 174 aa4.17□□□□□ -1.74
SCN1A-209ENST00000635750 CDPF1Q6NVV7 123 aa4.16□□□□□ -1.74
SCN1A-209ENST00000635750 C10orf91Q5T1B1 145 aa4.16□□□□□ -1.74
SCN1A-209ENST00000635750 TP53TG3Q9ULZ0 132 aa4.16□□□□□ -1.74
SCN1A-209ENST00000635750 LRP4O75096 1905 aa4.16□□□□□ -1.74
SCN1A-209ENST00000635750 SLPIP03973 132 aa4.16□□□□□ -1.74
SCN1A-209ENST00000635750 NEXN-AS1Q8NBZ9 246 aa4.16□□□□□ -1.74
SCN1A-209ENST00000635750 LST1O00453 97 aa4.16□□□□□ -1.74
SCN1A-209ENST00000635750 RSPO1Q2MKA7 263 aaPredicted RBP4.16□□□□□ -1.74
SCN1A-209ENST00000635750 COL5A1P20908 1838 aaPredicted RBP4.16□□□□□ -1.74
SCN1A-209ENST00000635750 DEFB1P60022 68 aa4.16□□□□□ -1.74
SCN1A-209ENST00000635750 CFAP126Q5VTH2 177 aa4.16□□□□□ -1.74
SCN1A-209ENST00000635750 C6orf99Q4VX62 202 aa4.15□□□□□ -1.74
SCN1A-209ENST00000635750 Q6ZSR3 168 aa4.15□□□□□ -1.74
SCN1A-209ENST00000635750 LIMD2Q9BT23 127 aa4.15□□□□□ -1.74
SCN1A-209ENST00000635750 MUC7Q8TAX7 377 aa4.15□□□□□ -1.74
SCN1A-209ENST00000635750 C1orf147Q96MC9 270 aaPredicted RBP4.15□□□□□ -1.74
SCN1A-209ENST00000635750 CCDC140Q96MF4 163 aa4.15□□□□□ -1.74
SCN1A-209ENST00000635750 CLUHP3Q96NS8 147 aa4.15□□□□□ -1.74
SCN1A-209ENST00000635750 NANOS2P60321 138 aaKnown RBP4.15□□□□□ -1.74
SCN1A-209ENST00000635750 FAM30AQ9NZY2 134 aa4.15□□□□□ -1.74
SCN1A-209ENST00000635750 K7EQG2 157 aa4.15□□□□□ -1.75
SCN1A-209ENST00000635750 IGLV1-47P01700 117 aa4.15□□□□□ -1.75
SCN1A-209ENST00000635750 IGLC6P0CF74 106 aa4.15□□□□□ -1.75
SCN1A-209ENST00000635750 BBC3Q96PG8 261 aaPredicted RBP4.15□□□□□ -1.75
SCN1A-209ENST00000635750 TRBV7-6A0A0J9YX20 115 aa4.15□□□□□ -1.75
SCN1A-209ENST00000635750 FAM167A-AS1Q96KT0 104 aa4.15□□□□□ -1.75
SCN1A-209ENST00000635750 WFDC10AQ9H1F0 79 aa4.15□□□□□ -1.75
SCN1A-209ENST00000635750 TRBV6-5A0A0K0K1A5 114 aa4.15□□□□□ -1.75
SCN1A-209ENST00000635750 M0QXV9 152 aa4.15□□□□□ -1.75
SCN1A-209ENST00000635750 REG3GQ6UW15 175 aa4.15□□□□□ -1.75
SCN1A-209ENST00000635750 PLA2G1BP04054 148 aaKnown RBP4.14□□□□□ -1.75
SCN1A-209ENST00000635750 PATE2Q6UY27 113 aa4.14□□□□□ -1.75
SCN1A-209ENST00000635750 LOC100131303A0A0U1RQF7 123 aa4.14□□□□□ -1.75
SCN1A-209ENST00000635750 TRBV27A0A0K0K1C4 114 aa4.14□□□□□ -1.75
SCN1A-209ENST00000635750 Q6ZSV7 163 aa4.14□□□□□ -1.75
SCN1A-209ENST00000635750 LINC00308Q8TCZ7 52 aa4.14□□□□□ -1.75
SCN1A-209ENST00000635750 C1orf134Q5TEV5 83 aa4.14□□□□□ -1.75
SCN1A-209ENST00000635750 LINC00173Q6ZV60 143 aa4.14□□□□□ -1.75
SCN1A-209ENST00000635750 CDKN2A-AS1Q9UH64 79 aa4.14□□□□□ -1.75
SCN1A-209ENST00000635750 CCDC168Q8NDH2 2452 aa4.13□□□□□ -1.75
SCN1A-209ENST00000635750 NDUFV3P56181 108 aaKnown RBP4.13□□□□□ -1.75
SCN1A-209ENST00000635750 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.13□□□□□ -1.75
SCN1A-209ENST00000635750 KRTAP27-1Q3LI81 207 aa4.13□□□□□ -1.75
SCN1A-209ENST00000635750 SNURFQ9Y675 71 aa4.13□□□□□ -1.75
SCN1A-209ENST00000635750 U3KQK5 164 aa4.13□□□□□ -1.75
SCN1A-209ENST00000635750 CPAMD8Q8IZJ3 1885 aa4.13□□□□□ -1.75
SCN1A-209ENST00000635750 IGLV2-8P01709 118 aa4.13□□□□□ -1.75
SCN1A-209ENST00000635750 LMO4P61968 165 aa4.13□□□□□ -1.75
SCN1A-209ENST00000635750 IGLV4-3A0A075B6K6 122 aa4.12□□□□□ -1.75
SCN1A-209ENST00000635750 IGHV6-1A0A0B4J1U7 121 aa4.12□□□□□ -1.75
SCN1A-209ENST00000635750 C1orf137Q5JT78 98 aa4.12□□□□□ -1.75
SCN1A-209ENST00000635750 TRBV30A0A0K0K1B3 111 aa4.12□□□□□ -1.75
SCN1A-209ENST00000635750 RBX1P62877 108 aa4.12□□□□□ -1.75
SCN1A-209ENST00000635750 LINC01556Q5JQF7 62 aa4.12□□□□□ -1.75
SCN1A-209ENST00000635750 PSMG3-AS1Q96PY0 264 aa4.12□□□□□ -1.75
SCN1A-209ENST00000635750 CSDC2Q9Y534 153 aaKnown RBP4.12□□□□□ -1.75
SCN1A-209ENST00000635750 IGLV2-11P01706 119 aa4.12□□□□□ -1.75
SCN1A-209ENST00000635750 TIMM17BO60830 172 aa4.12□□□□□ -1.75
SCN1A-209ENST00000635750 Q6ZQY7 126 aa4.12□□□□□ -1.75
SCN1A-209ENST00000635750 RETNLBQ9BQ08 111 aa4.12□□□□□ -1.75
SCN1A-209ENST00000635750 ZNF73O43830 326 aaPredicted RBP4.12□□□□□ -1.75
SCN1A-209ENST00000635750 NHLRC4P0CG21 123 aaPredicted RBP4.11□□□□□ -1.75
SCN1A-209ENST00000635750 PLA2G2AP14555 144 aa4.11□□□□□ -1.75
SCN1A-209ENST00000635750 Q6JHZ5 121 aa4.11□□□□□ -1.75
SCN1A-209ENST00000635750 PTPRBP23467 1997 aa4.11□□□□□ -1.75
SCN1A-209ENST00000635750 P0C879 139 aa4.11□□□□□ -1.75
SCN1A-209ENST00000635750 COA6Q5JTJ3 125 aaKnown RBP4.11□□□□□ -1.75
SCN1A-209ENST00000635750 LINC00959A0A1B0GUT2 108 aa4.11□□□□□ -1.75
SCN1A-209ENST00000635750 SPINK1P00995 79 aa4.11□□□□□ -1.75
SCN1A-209ENST00000635750 MRGPRG-AS1Q2M3A8 158 aa4.11□□□□□ -1.75
SCN1A-209ENST00000635750 E7EUB6 86 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 242.9 ms