RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 CCL4L1Q8NHW4 92 aa0.52□□□□□ -2.33
CHD2-203ENST00000625243 DIRC1Q969H9 104 aa0.52□□□□□ -2.33
CHD2-203ENST00000625243 CIB3Q96Q77 187 aaPredicted RBP0.52□□□□□ -2.33
CHD2-203ENST00000625243 CCL19Q99731 98 aa0.52□□□□□ -2.33
CHD2-203ENST00000625243 NIT2Q9NQR4 276 aa0.52□□□□□ -2.33
CHD2-203ENST00000625243 GINS2Q9Y248 185 aa0.52□□□□□ -2.33
CHD2-203ENST00000625243 U3KQA8 63 aa0.52□□□□□ -2.33
CHD2-203ENST00000625243 CCDC171Q6TFL3 1326 aa0.52□□□□□ -2.33
CHD2-203ENST00000625243 PLIN4Q96Q06 1357 aa0.52□□□□□ -2.33
CHD2-203ENST00000625243 LRP1BQ9NZR2 4599 aa0.52□□□□□ -2.33
CHD2-203ENST00000625243 CITO14578 2027 aa0.52□□□□□ -2.33
CHD2-203ENST00000625243 HRNRQ86YZ3 2850 aaPredicted RBP0.51□□□□□ -2.33
CHD2-203ENST00000625243 VPS13BQ7Z7G8 4022 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 TRAV13-1A0A0B4J241 112 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 A0A0J9YY99 117 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 A0A1W2PRE2 83 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 NUPR2A6NF83 97 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 K7EIL1 84 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 PLXNA2O75051 1894 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 ROCK2O75116 1388 aaKnown RBP0.51□□□□□ -2.33
CHD2-203ENST00000625243 LY6G6CO95867 125 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 IFNA21P01568 189 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 STATHP02808 62 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 APODP05090 189 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 CCSMST1Q4G0I0 132 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 DEFB121Q5J5C9 76 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 VPS13DQ5THJ4 4388 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 GLIPR1L1Q6UWM5 242 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 ZCCHC23Q6ZST2 131 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 LINC00269Q8N2A0 174 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 C10orf111Q8N326 155 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 FDCSPQ8NFU4 85 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 THEM6Q8WUY1 208 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 SKA2Q8WVK7 121 aaPredicted RBP0.51□□□□□ -2.33
CHD2-203ENST00000625243 LIMD2Q9BT23 127 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 LPAR5Q9H1C0 372 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 MED31Q9Y3C7 131 aa0.51□□□□□ -2.33
CHD2-203ENST00000625243 MYH1P12882 1939 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 NUP210LQ5VU65 1888 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 MYO5AQ9Y4I1 1855 aaKnown RBP0.5□□□□□ -2.33
CHD2-203ENST00000625243 DNAH17Q9UFH2 4485 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 MACF1Q9UPN3 7388 aaKnown RBP0.5□□□□□ -2.33
CHD2-203ENST00000625243 PKD1P98161 4303 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.5□□□□□ -2.33
CHD2-203ENST00000625243 TRBV7-6A0A0J9YX20 115 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 TRBV27A0A0K0K1C4 114 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 H7BYZ3 331 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 PGRMC1O00264 195 aaKnown RBP0.5□□□□□ -2.33
CHD2-203ENST00000625243 KRTAP2-3P0C7H8 128 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 CCL4P13236 92 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 PDE6GP18545 87 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 S100GP29377 79 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 ETV6P41212 452 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 SPINT3P49223 89 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 DNAJB13P59910 316 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 C3orf62Q6ZUJ4 267 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 Q86TA4 180 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 TCTEX1D1Q8N7M0 179 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 MORN4Q8NDC4 146 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 OR9Q1Q8NGQ5 310 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 DDA1Q9BW61 102 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 KRTAP2-4Q9BYR9 128 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 SMPXQ9UHP9 88 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 JPT1Q9UK76 154 aa0.5□□□□□ -2.33
CHD2-203ENST00000625243 MYH9P35579 1960 aaKnown RBP0.5□□□□□ -2.33
CHD2-203ENST00000625243 FAT3Q8TDW7 4589 aa0.49□□□□□ -2.33
CHD2-203ENST00000625243 MYH10P35580 1976 aa0.49□□□□□ -2.33
CHD2-203ENST00000625243 MYH4Q9Y623 1939 aa0.49□□□□□ -2.33
CHD2-203ENST00000625243 PRORSD1PA6NEY8 169 aa0.49□□□□□ -2.33
CHD2-203ENST00000625243 IFITM5A6NNB3 132 aa0.49□□□□□ -2.33
CHD2-203ENST00000625243 TSTD3H0UI37 97 aa0.49□□□□□ -2.33
CHD2-203ENST00000625243 RPS3P23396 243 aaKnown RBP eCLIP0.49□□□□□ -2.33
CHD2-203ENST00000625243 KDELR1P24390 212 aa0.49□□□□□ -2.33
CHD2-203ENST00000625243 POLR2HP52434 150 aaKnown RBP0.49□□□□□ -2.33
CHD2-203ENST00000625243 Q5VSD8 79 aa0.49□□□□□ -2.33
CHD2-203ENST00000625243 IZUMO2Q6UXV1 221 aa0.49□□□□□ -2.33
CHD2-203ENST00000625243 ATOH7Q8N100 152 aa0.49□□□□□ -2.33
CHD2-203ENST00000625243 TEX29Q8N6K0 151 aa0.49□□□□□ -2.33
CHD2-203ENST00000625243 OR8J3Q8NGG0 315 aa0.49□□□□□ -2.33
CHD2-203ENST00000625243 OR51A4Q8NGJ6 313 aa0.49□□□□□ -2.33
CHD2-203ENST00000625243 CARD19Q96LW7 228 aa0.49□□□□□ -2.33
CHD2-203ENST00000625243 SPTBP11277 2137 aa0.49□□□□□ -2.33
CHD2-203ENST00000625243 MUC5ACP98088 5654 aa0.49□□□□□ -2.33
CHD2-203ENST00000625243 EML6Q6ZMW3 1958 aa0.48□□□□□ -2.33
CHD2-203ENST00000625243 EXPH5Q8NEV8 1989 aa0.48□□□□□ -2.33
CHD2-203ENST00000625243 TNXBP22105 4242 aa0.48□□□□□ -2.33
CHD2-203ENST00000625243 A0A096LNT2 108 aa0.48□□□□□ -2.33
CHD2-203ENST00000625243 LOC107984640A0A0U1RRK4 108 aa0.48□□□□□ -2.33
CHD2-203ENST00000625243 PNMA8CA0A1B0GUJ8 204 aa0.48□□□□□ -2.33
CHD2-203ENST00000625243 EDF1O60869 148 aaKnown RBP0.48□□□□□ -2.33
CHD2-203ENST00000625243 GYPBP06028 91 aa0.48□□□□□ -2.33
CHD2-203ENST00000625243 CRYGSP22914 178 aa0.48□□□□□ -2.33
CHD2-203ENST00000625243 ZNF137PP52743 207 aa0.48□□□□□ -2.33
CHD2-203ENST00000625243 CAV3P56539 151 aa0.48□□□□□ -2.33
CHD2-203ENST00000625243 FXYD4P59646 89 aa0.48□□□□□ -2.33
CHD2-203ENST00000625243 SNRPD3P62318 126 aaKnown RBP0.48□□□□□ -2.33
CHD2-203ENST00000625243 UBA52P62987 128 aaKnown RBP0.48□□□□□ -2.33
CHD2-203ENST00000625243 DEFB133Q30KQ1 61 aa0.48□□□□□ -2.33
CHD2-203ENST00000625243 HRCT1Q6UXD1 115 aa0.48□□□□□ -2.33
CHD2-203ENST00000625243 OR5A2Q8NGI9 324 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms