RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 UBE2D3P61077 147 aa8.57□□□□□ -1.04
TP53-227ENST00000622645 UBE2D2P62837 147 aa8.57□□□□□ -1.04
TP53-227ENST00000622645 SMR3AQ99954 134 aa8.57□□□□□ -1.04
TP53-227ENST00000622645 PRO1854Q9UHT4 67 aa8.57□□□□□ -1.04
TP53-227ENST00000622645 GAGE12HA6NDE8 117 aa8.57□□□□□ -1.04
TP53-227ENST00000622645 J3QR89 54 aa8.57□□□□□ -1.04
TP53-227ENST00000622645 LINC00694P0DN24 101 aa8.57□□□□□ -1.04
TP53-227ENST00000622645 DGAT2L7PQ6IED9 249 aa8.57□□□□□ -1.04
TP53-227ENST00000622645 J3QKU1 62 aa8.57□□□□□ -1.04
TP53-227ENST00000622645 IGLV1-51P01701 117 aa8.57□□□□□ -1.04
TP53-227ENST00000622645 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.57□□□□□ -1.04
TP53-227ENST00000622645 VSIG2Q96IQ7 327 aa8.57□□□□□ -1.04
TP53-227ENST00000622645 GEMIN7Q9H840 131 aaKnown RBP8.57□□□□□ -1.04
TP53-227ENST00000622645 CDKN2A-AS1Q9UH64 79 aa8.57□□□□□ -1.04
TP53-227ENST00000622645 FASNP49327 2511 aaKnown RBP8.56□□□□□ -1.04
TP53-227ENST00000622645 C19orf73Q9NVV2 129 aa8.56□□□□□ -1.04
TP53-227ENST00000622645 NDUFA12Q9UI09 145 aa8.56□□□□□ -1.04
TP53-227ENST00000622645 NDUFA7O95182 113 aa8.56□□□□□ -1.04
TP53-227ENST00000622645 NTM-AS1Q6ZSK4 140 aa8.56□□□□□ -1.04
TP53-227ENST00000622645 ZNF418Q8TF45 676 aaPredicted RBP8.56□□□□□ -1.04
TP53-227ENST00000622645 SIGMAR1Q99720 223 aa8.56□□□□□ -1.04
TP53-227ENST00000622645 LITAFQ99732 161 aa8.56□□□□□ -1.04
TP53-227ENST00000622645 GAGE12JA6NER3 117 aa8.55□□□□□ -1.04
TP53-227ENST00000622645 H7C2G1 150 aa8.55□□□□□ -1.04
TP53-227ENST00000622645 K7EQD1 137 aa8.55□□□□□ -1.04
TP53-227ENST00000622645 PRSS2P07478 247 aa8.55□□□□□ -1.04
TP53-227ENST00000622645 RPL36AP83881 106 aaKnown RBP8.55□□□□□ -1.04
TP53-227ENST00000622645 SMAGPQ0VAQ4 97 aa8.55□□□□□ -1.04
TP53-227ENST00000622645 GAGE4Q13068 117 aa8.55□□□□□ -1.04
TP53-227ENST00000622645 GAGE5Q13069 117 aa8.55□□□□□ -1.04
TP53-227ENST00000622645 ADAMTSL4-AS1Q5T5F5 129 aa8.55□□□□□ -1.04
TP53-227ENST00000622645 RPL36ALQ969Q0 106 aaKnown RBP8.55□□□□□ -1.04
TP53-227ENST00000622645 PLAC8L1A1L4L8 177 aa8.55□□□□□ -1.04
TP53-227ENST00000622645 TCL1BO95988 128 aa8.55□□□□□ -1.04
TP53-227ENST00000622645 HILS1P60008 231 aa8.55□□□□□ -1.04
TP53-227ENST00000622645 TRAV4A0A0B4J268 109 aa8.54□□□□□ -1.04
TP53-227ENST00000622645 COX6A2Q02221 97 aa8.54□□□□□ -1.04
TP53-227ENST00000622645 HIVEP2P31629 2446 aa8.54□□□□□ -1.04
TP53-227ENST00000622645 GAGE7O76087 117 aa8.54□□□□□ -1.04
TP53-227ENST00000622645 GAGE12FP0CL80 117 aa8.54□□□□□ -1.04
TP53-227ENST00000622645 GAGE12GP0CL81 117 aa8.54□□□□□ -1.04
TP53-227ENST00000622645 GAGE12IP0CL82 117 aa8.54□□□□□ -1.04
TP53-227ENST00000622645 SCGB1C2P0DMR2 95 aa8.54□□□□□ -1.04
TP53-227ENST00000622645 TRBV10-1A0A0K0K1A3 114 aa8.53□□□□□ -1.04
TP53-227ENST00000622645 IGHV3-33P01772 117 aa8.53□□□□□ -1.04
TP53-227ENST00000622645 SPATA25Q9BR10 227 aa8.53□□□□□ -1.04
TP53-227ENST00000622645 TRGV2A0A075B6R0 118 aa8.53□□□□□ -1.04
TP53-227ENST00000622645 CMC4P56277 68 aaPredicted RBP8.53□□□□□ -1.04
TP53-227ENST00000622645 NPC2P61916 151 aa8.53□□□□□ -1.04
TP53-227ENST00000622645 DAZ2Q13117 558 aaKnown RBP8.53□□□□□ -1.04
TP53-227ENST00000622645 C1QTNF4Q9BXJ3 329 aa8.53□□□□□ -1.04
TP53-227ENST00000622645 FOXI1Q12951 378 aa8.52□□□□□ -1.05
TP53-227ENST00000622645 LINC00242Q5T6M2 205 aa8.52□□□□□ -1.05
TP53-227ENST00000622645 CSNK1G2-AS1Q8NCQ2 148 aa8.52□□□□□ -1.05
TP53-227ENST00000622645 NOTCH2Q04721 2471 aa8.52□□□□□ -1.05
TP53-227ENST00000622645 TRAV13-1A0A0B4J241 112 aa8.52□□□□□ -1.05
TP53-227ENST00000622645 LOC100131303A0A0U1RQF7 123 aa8.52□□□□□ -1.05
TP53-227ENST00000622645 ZFAND6Q6FIF0 208 aa8.52□□□□□ -1.05
TP53-227ENST00000622645 DAZ4Q86SG3 579 aaKnown RBP8.52□□□□□ -1.05
TP53-227ENST00000622645 C16orf74Q96GX8 76 aa8.52□□□□□ -1.05
TP53-227ENST00000622645 TMEM101Q96IK0 257 aa8.52□□□□□ -1.05
TP53-227ENST00000622645 DAZ3Q9NR90 486 aaKnown RBP8.52□□□□□ -1.05
TP53-227ENST00000622645 ERG28Q9UKR5 140 aa8.52□□□□□ -1.05
TP53-227ENST00000622645 A0A0B4J2C4 111 aa8.51□□□□□ -1.05
TP53-227ENST00000622645 TIRAPP58753 221 aa8.51□□□□□ -1.05
TP53-227ENST00000622645 LYRM7Q5U5X0 104 aa8.51□□□□□ -1.05
TP53-227ENST00000622645 IGLV5-45A0A087WSX0 123 aa8.51□□□□□ -1.05
TP53-227ENST00000622645 KRTAP10-3P60369 221 aa8.51□□□□□ -1.05
TP53-227ENST00000622645 FAM110AQ9BQ89 295 aa8.51□□□□□ -1.05
TP53-227ENST00000622645 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.5□□□□□ -1.05
TP53-227ENST00000622645 DAND5Q8N907 189 aa8.5□□□□□ -1.05
TP53-227ENST00000622645 TRBV20-1A0A075B6N2 111 aa8.5□□□□□ -1.05
TP53-227ENST00000622645 Q1RN00 199 aa8.5□□□□□ -1.05
TP53-227ENST00000622645 KMT2BQ9UMN6 2715 aaPredicted RBP8.5□□□□□ -1.05
TP53-227ENST00000622645 HECTD1Q9ULT8 2610 aa8.49□□□□□ -1.05
TP53-227ENST00000622645 SBSPONQ8IVN8 264 aa8.49□□□□□ -1.05
TP53-227ENST00000622645 ATP6V0E2Q8NHE4 81 aa8.49□□□□□ -1.05
TP53-227ENST00000622645 FN1P02751 2386 aaKnown RBP8.49□□□□□ -1.05
TP53-227ENST00000622645 HERVK_113P63121 156 aa8.49□□□□□ -1.05
TP53-227ENST00000622645 MIAQ16674 131 aa8.49□□□□□ -1.05
TP53-227ENST00000622645 SPANXDQ9BXN6 97 aa8.49□□□□□ -1.05
TP53-227ENST00000622645 CDC42SE2Q9NRR3 84 aa8.49□□□□□ -1.05
TP53-227ENST00000622645 SPANXCQ9NY87 97 aa8.49□□□□□ -1.05
TP53-227ENST00000622645 ZNF625Q96I27 306 aaPredicted RBP8.48□□□□□ -1.05
TP53-227ENST00000622645 CARD19Q96LW7 228 aa8.48□□□□□ -1.05
TP53-227ENST00000622645 CSDC2Q9Y534 153 aaKnown RBP8.48□□□□□ -1.05
TP53-227ENST00000622645 TRGV4A0A0C4DH28 118 aa8.48□□□□□ -1.05
TP53-227ENST00000622645 OVOL2Q9BRP0 275 aa8.48□□□□□ -1.05
TP53-227ENST00000622645 A0A0U1RRA0 63 aa8.47□□□□□ -1.05
TP53-227ENST00000622645 NDUFA1O15239 70 aa8.47□□□□□ -1.05
TP53-227ENST00000622645 SCGB1A1P11684 91 aa8.47□□□□□ -1.05
TP53-227ENST00000622645 Q9H8V8 135 aa8.47□□□□□ -1.05
TP53-227ENST00000622645 IGLV5-39A0A0G2JS06 123 aa8.47□□□□□ -1.05
TP53-227ENST00000622645 TRBV6-4A0A1B0GX49 114 aa8.47□□□□□ -1.05
TP53-227ENST00000622645 SMIM1B2RUZ4 78 aa8.47□□□□□ -1.05
TP53-227ENST00000622645 UBE2L6O14933 153 aa8.47□□□□□ -1.05
TP53-227ENST00000622645 PF4P02776 101 aa8.47□□□□□ -1.05
TP53-227ENST00000622645 TEN1Q86WV5 123 aa8.47□□□□□ -1.05
TP53-227ENST00000622645 TMEM243Q9BU79 118 aa8.47□□□□□ -1.05
TP53-227ENST00000622645 CDIP1Q9H305 208 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms