RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 TM2D3Q9BRN9 247 aa6.35□□□□□ -1.39
GTF2I-219ENST00000621040 OTORQ9NRC9 128 aa6.35□□□□□ -1.39
GTF2I-219ENST00000621040 H3BMM0 161 aa6.35□□□□□ -1.39
GTF2I-219ENST00000621040 LEPP41159 167 aa6.35□□□□□ -1.39
GTF2I-219ENST00000621040 ZNF80P51504 273 aaPredicted RBP6.35□□□□□ -1.39
GTF2I-219ENST00000621040 PMVKQ15126 192 aa6.35□□□□□ -1.39
GTF2I-219ENST00000621040 CEMP1Q6PRD7 247 aaPredicted RBP6.35□□□□□ -1.39
GTF2I-219ENST00000621040 SFTA2Q6UW10 78 aa6.35□□□□□ -1.39
GTF2I-219ENST00000621040 UBE2WQ96B02 151 aa6.35□□□□□ -1.39
GTF2I-219ENST00000621040 SMAD5-AS1Q9Y6J3 95 aa6.35□□□□□ -1.39
GTF2I-219ENST00000621040 PRB2P02812 416 aaPredicted RBP6.34□□□□□ -1.39
GTF2I-219ENST00000621040 CFC1BP0CG36 223 aa6.34□□□□□ -1.39
GTF2I-219ENST00000621040 CFC1P0CG37 223 aa6.34□□□□□ -1.39
GTF2I-219ENST00000621040 SHANK2-AS3Q9BTD1 123 aa6.34□□□□□ -1.39
GTF2I-219ENST00000621040 DAZ1Q9NQZ3 744 aaKnown RBP6.34□□□□□ -1.39
GTF2I-219ENST00000621040 SACSQ9NZJ4 4579 aa6.34□□□□□ -1.39
GTF2I-219ENST00000621040 ZNF56Q15929 161 aa6.34□□□□□ -1.39
GTF2I-219ENST00000621040 LINC00477Q96M19 166 aa6.34□□□□□ -1.39
GTF2I-219ENST00000621040 PRR25Q96S07 402 aa6.34□□□□□ -1.39
GTF2I-219ENST00000621040 JPT2Q9H910 190 aa6.34□□□□□ -1.39
GTF2I-219ENST00000621040 NXT2Q9NPJ8 142 aaKnown RBP6.34□□□□□ -1.39
GTF2I-219ENST00000621040 TRAV12-1A0A0B4J245 112 aa6.34□□□□□ -1.4
GTF2I-219ENST00000621040 TRBV10-2A0A0K0K1G8 114 aa6.34□□□□□ -1.4
GTF2I-219ENST00000621040 TMEM170BQ5T4T1 132 aa6.34□□□□□ -1.4
GTF2I-219ENST00000621040 TMEM75Q8N9X5 138 aa6.34□□□□□ -1.4
GTF2I-219ENST00000621040 IGHV7-4-1A0A0J9YVY3 117 aa6.33□□□□□ -1.4
GTF2I-219ENST00000621040 HIST1H4AP62805 103 aaKnown RBP6.33□□□□□ -1.4
GTF2I-219ENST00000621040 Q8N8P6 123 aa6.33□□□□□ -1.4
GTF2I-219ENST00000621040 LINC01620Q4KN68 170 aa6.33□□□□□ -1.4
GTF2I-219ENST00000621040 SDIM1Q6ZPB5 146 aa6.33□□□□□ -1.4
GTF2I-219ENST00000621040 Q8TAT8 98 aa6.33□□□□□ -1.4
GTF2I-219ENST00000621040 PRO1854Q9UHT4 67 aa6.33□□□□□ -1.4
GTF2I-219ENST00000621040 TGP01266 2768 aa6.33□□□□□ -1.4
GTF2I-219ENST00000621040 CXCL5P42830 114 aa6.32□□□□□ -1.4
GTF2I-219ENST00000621040 KMT2CQ8NEZ4 4911 aaKnown RBP6.32□□□□□ -1.4
GTF2I-219ENST00000621040 IGLV2-18A0A075B6J9 118 aa6.32□□□□□ -1.4
GTF2I-219ENST00000621040 CKS2P33552 79 aa6.32□□□□□ -1.4
GTF2I-219ENST00000621040 TRACP01848 142 aa6.32□□□□□ -1.4
GTF2I-219ENST00000621040 ATXN8Q156A1 80 aa6.32□□□□□ -1.4
GTF2I-219ENST00000621040 C5orf38Q86SI9 138 aa6.32□□□□□ -1.4
GTF2I-219ENST00000621040 TMEM61Q8N0U2 210 aa6.32□□□□□ -1.4
GTF2I-219ENST00000621040 MSRB1Q9NZV6 116 aa6.32□□□□□ -1.4
GTF2I-219ENST00000621040 PYGO1Q9Y3Y4 419 aa6.32□□□□□ -1.4
GTF2I-219ENST00000621040 PLECQ15149 4684 aaKnown RBP6.31□□□□□ -1.4
GTF2I-219ENST00000621040 F8VRH5 84 aa6.31□□□□□ -1.4
GTF2I-219ENST00000621040 ACYP1P07311 99 aa6.31□□□□□ -1.4
GTF2I-219ENST00000621040 S100A4P26447 101 aaKnown RBP6.31□□□□□ -1.4
GTF2I-219ENST00000621040 LYZL1Q6UWQ5 148 aa6.31□□□□□ -1.4
GTF2I-219ENST00000621040 COX8CQ7Z4L0 72 aa6.31□□□□□ -1.4
GTF2I-219ENST00000621040 RYR2Q92736 4967 aa6.31□□□□□ -1.4
GTF2I-219ENST00000621040 SMKR1H3BMG3 65 aa6.31□□□□□ -1.4
GTF2I-219ENST00000621040 IGHV3-30P01768 117 aa6.31□□□□□ -1.4
GTF2I-219ENST00000621040 IGHV3-30-5P0DP03 117 aa6.31□□□□□ -1.4
GTF2I-219ENST00000621040 RNF182Q8N6D2 247 aa6.31□□□□□ -1.4
GTF2I-219ENST00000621040 RNF185Q96GF1 192 aa6.31□□□□□ -1.4
GTF2I-219ENST00000621040 H7C1H1 209 aa6.31□□□□□ -1.4
GTF2I-219ENST00000621040 IGHV4-30-4P0DP06 118 aa6.31□□□□□ -1.4
GTF2I-219ENST00000621040 C16orf92Q96LL3 132 aa6.31□□□□□ -1.4
GTF2I-219ENST00000621040 FAM19A4Q96LR4 140 aa6.31□□□□□ -1.4
GTF2I-219ENST00000621040 IGKV2-40A0A087WW87 121 aaPredicted RBP6.3□□□□□ -1.4
GTF2I-219ENST00000621040 RBMY1BA6NDE4 496 aaKnown RBP6.3□□□□□ -1.4
GTF2I-219ENST00000621040 RBMY1EA6NEQ0 496 aaKnown RBP6.3□□□□□ -1.4
GTF2I-219ENST00000621040 H3BT86 120 aa6.3□□□□□ -1.4
GTF2I-219ENST00000621040 IGKV2D-40P01614 121 aaPredicted RBP6.3□□□□□ -1.4
GTF2I-219ENST00000621040 RBMY1DP0C7P1 496 aaKnown RBP6.3□□□□□ -1.4
GTF2I-219ENST00000621040 PLEKHB2Q96CS7 222 aa6.3□□□□□ -1.4
GTF2I-219ENST00000621040 RNF125Q96EQ8 232 aa6.3□□□□□ -1.4
GTF2I-219ENST00000621040 IGHV3-33P01772 117 aa6.3□□□□□ -1.4
GTF2I-219ENST00000621040 SRSF9Q13242 221 aaKnown RBP eCLIP6.3□□□□□ -1.4
GTF2I-219ENST00000621040 CYSTM1Q9H1C7 97 aa6.3□□□□□ -1.4
GTF2I-219ENST00000621040 A0A0J9YY99 117 aa6.29□□□□□ -1.4
GTF2I-219ENST00000621040 A8MTW9 85 aa6.29□□□□□ -1.4
GTF2I-219ENST00000621040 EPM2AB3EWF7 344 aa6.29□□□□□ -1.4
GTF2I-219ENST00000621040 SOCS3O14543 225 aa6.29□□□□□ -1.4
GTF2I-219ENST00000621040 SH2D1AO60880 128 aa6.29□□□□□ -1.4
GTF2I-219ENST00000621040 ODF3L2Q3SX64 289 aa6.29□□□□□ -1.4
GTF2I-219ENST00000621040 UPK3BQ9BT76 320 aa6.29□□□□□ -1.4
GTF2I-219ENST00000621040 RYR3Q15413 4870 aa6.29□□□□□ -1.4
GTF2I-219ENST00000621040 DCANP1Q8TF63 244 aa6.29□□□□□ -1.4
GTF2I-219ENST00000621040 VPS13DQ5THJ4 4388 aa6.29□□□□□ -1.4
GTF2I-219ENST00000621040 TENM3Q9P273 2699 aa6.29□□□□□ -1.4
GTF2I-219ENST00000621040 ZNF815PA8K554 130 aa6.29□□□□□ -1.4
GTF2I-219ENST00000621040 PRAC2D3DTV9 90 aa6.29□□□□□ -1.4
GTF2I-219ENST00000621040 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.29□□□□□ -1.4
GTF2I-219ENST00000621040 LINC00643Q86TS7 51 aa6.29□□□□□ -1.4
GTF2I-219ENST00000621040 METTL26Q96S19 204 aa6.29□□□□□ -1.4
GTF2I-219ENST00000621040 C11orf21Q9P2W6 132 aa6.29□□□□□ -1.4
GTF2I-219ENST00000621040 V9GYY9 64 aa6.29□□□□□ -1.4
GTF2I-219ENST00000621040 A0A0B4J2C4 111 aa6.28□□□□□ -1.4
GTF2I-219ENST00000621040 F5H697 171 aa6.28□□□□□ -1.4
GTF2I-219ENST00000621040 RPL35AP18077 110 aaKnown RBP6.28□□□□□ -1.4
GTF2I-219ENST00000621040 LINC00336Q6ZUF6 198 aa6.28□□□□□ -1.4
GTF2I-219ENST00000621040 hADV29S1A0JD25 119 aa6.28□□□□□ -1.4
GTF2I-219ENST00000621040 ATOX1O00244 68 aa6.28□□□□□ -1.4
GTF2I-219ENST00000621040 TMEM263Q8WUH6 116 aaKnown RBP6.28□□□□□ -1.4
GTF2I-219ENST00000621040 BUB3O43684 328 aa6.28□□□□□ -1.4
GTF2I-219ENST00000621040 EIF4EBP3O60516 100 aaPredicted RBP6.28□□□□□ -1.4
GTF2I-219ENST00000621040 GATA1P15976 413 aaPredicted RBP6.28□□□□□ -1.4
GTF2I-219ENST00000621040 LYPD1Q8N2G4 141 aa6.28□□□□□ -1.4
GTF2I-219ENST00000621040 C9orf85Q96MD7 179 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms