RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 Q6ZUT4 128 aa14.29□□□□□ -0.12
MMP28-207ENST00000619655 KIR2DL5BQ8NHK3 375 aa14.29□□□□□ -0.12
MMP28-207ENST00000619655 SPANXA1Q9NS26 97 aa14.29□□□□□ -0.12
MMP28-207ENST00000619655 TRBV6-4A0A1B0GX49 114 aa14.28□□□□□ -0.12
MMP28-207ENST00000619655 NTM-AS1Q6ZSK4 140 aa14.28□□□□□ -0.12
MMP28-207ENST00000619655 PRIMA1Q86XR5 153 aa14.28□□□□□ -0.12
MMP28-207ENST00000619655 SMIM9A6NGZ8 99 aa14.27□□□□□ -0.12
MMP28-207ENST00000619655 DGAT2L7PQ6IED9 249 aa14.27□□□□□ -0.12
MMP28-207ENST00000619655 IGHV3-64A0A075B6Q5 118 aa14.27□□□□□ -0.13
MMP28-207ENST00000619655 MYMXA0A1B0GTQ4 84 aa14.27□□□□□ -0.13
MMP28-207ENST00000619655 LINC00694P0DN24 101 aa14.27□□□□□ -0.13
MMP28-207ENST00000619655 AMELXQ99217 191 aa14.27□□□□□ -0.13
MMP28-207ENST00000619655 HIGD1BQ9P298 99 aa14.27□□□□□ -0.13
MMP28-207ENST00000619655 WIPF1O43516 503 aa14.26□□□□□ -0.13
MMP28-207ENST00000619655 FAM222AQ5U5X8 452 aa14.26□□□□□ -0.13
MMP28-207ENST00000619655 NFE4Q86UQ8 179 aa14.26□□□□□ -0.13
MMP28-207ENST00000619655 ZNF815PA8K554 130 aa14.26□□□□□ -0.13
MMP28-207ENST00000619655 K7EP34 96 aa14.25□□□□□ -0.13
MMP28-207ENST00000619655 CIDEAO60543 219 aa14.25□□□□□ -0.13
MMP28-207ENST00000619655 GCSHP23434 173 aa14.25□□□□□ -0.13
MMP28-207ENST00000619655 ZNF22P17026 224 aaPredicted RBP14.24□□□□□ -0.13
MMP28-207ENST00000619655 IGHV4-28A0A0C4DH34 117 aa14.24□□□□□ -0.13
MMP28-207ENST00000619655 CMYA5Q8N3K9 4069 aa14.23□□□□□ -0.13
MMP28-207ENST00000619655 ANK2Q01484 3957 aa14.23□□□□□ -0.13
MMP28-207ENST00000619655 H3BUT2 72 aa14.23□□□□□ -0.13
MMP28-207ENST00000619655 TSPEAR-AS2P59090 65 aa14.23□□□□□ -0.13
MMP28-207ENST00000619655 KRTAP10-11P60412 298 aa14.23□□□□□ -0.13
MMP28-207ENST00000619655 SCGB1D4Q6XE38 83 aa14.23□□□□□ -0.13
MMP28-207ENST00000619655 SHISA2Q6UWI4 295 aa14.22□□□□□ -0.13
MMP28-207ENST00000619655 UBE2L6O14933 153 aa14.21□□□□□ -0.13
MMP28-207ENST00000619655 LINC00612Q8N6U2 182 aa14.21□□□□□ -0.13
MMP28-207ENST00000619655 TMEM223A0PJW6 202 aa14.21□□□□□ -0.13
MMP28-207ENST00000619655 CRYBA4P53673 196 aa14.21□□□□□ -0.13
MMP28-207ENST00000619655 PLEKHB2Q96CS7 222 aa14.21□□□□□ -0.13
MMP28-207ENST00000619655 COL6A5A8TX70 2615 aa14.2□□□□□ -0.14
MMP28-207ENST00000619655 G3V4G9 280 aa14.2□□□□□ -0.14
MMP28-207ENST00000619655 MRPS36P82909 103 aaKnown RBP14.2□□□□□ -0.14
MMP28-207ENST00000619655 OR5A1Q8NGJ0 315 aa14.2□□□□□ -0.14
MMP28-207ENST00000619655 RAB37Q96AX2 223 aa14.2□□□□□ -0.14
MMP28-207ENST00000619655 HIST1H4GQ99525 98 aa14.2□□□□□ -0.14
MMP28-207ENST00000619655 FXYD2P54710 66 aa14.2□□□□□ -0.14
MMP28-207ENST00000619655 TMEM243Q9BU79 118 aa14.19□□□□□ -0.14
MMP28-207ENST00000619655 LYRM9A8MSI8 78 aa14.19□□□□□ -0.14
MMP28-207ENST00000619655 J3QQQ9 107 aa14.19□□□□□ -0.14
MMP28-207ENST00000619655 NAA38Q9BRA0 125 aaKnown RBP14.19□□□□□ -0.14
MMP28-207ENST00000619655 A0A1W2PPM0 123 aa14.18□□□□□ -0.14
MMP28-207ENST00000619655 GYPEP15421 78 aa14.18□□□□□ -0.14
MMP28-207ENST00000619655 LGALS3P17931 250 aaKnown RBP14.18□□□□□ -0.14
MMP28-207ENST00000619655 GTSF1LQ9H1H1 148 aa14.18□□□□□ -0.14
MMP28-207ENST00000619655 SMIM13P0DJ93 91 aa14.18□□□□□ -0.14
MMP28-207ENST00000619655 SBSPONQ8IVN8 264 aa14.18□□□□□ -0.14
MMP28-207ENST00000619655 CEND1Q8N111 149 aa14.18□□□□□ -0.14
MMP28-207ENST00000619655 TIMM21Q9BVV7 248 aa14.18□□□□□ -0.14
MMP28-207ENST00000619655 CELA1Q9UNI1 258 aa14.18□□□□□ -0.14
MMP28-207ENST00000619655 Q8NAQ8 132 aa14.17□□□□□ -0.14
MMP28-207ENST00000619655 TM2D2Q9BX73 214 aa14.17□□□□□ -0.14
MMP28-207ENST00000619655 GEMIN7Q9H840 131 aaKnown RBP14.17□□□□□ -0.14
MMP28-207ENST00000619655 A0A096LPF7 62 aa14.16□□□□□ -0.14
MMP28-207ENST00000619655 RNF183Q96D59 192 aa14.16□□□□□ -0.14
MMP28-207ENST00000619655 TRAV8-3A0A0A6YYJ7 113 aa14.16□□□□□ -0.14
MMP28-207ENST00000619655 TINCRA0A1B0GVN0 87 aa14.16□□□□□ -0.14
MMP28-207ENST00000619655 MIFP14174 115 aa14.16□□□□□ -0.14
MMP28-207ENST00000619655 UBE2D1P51668 147 aa14.16□□□□□ -0.14
MMP28-207ENST00000619655 DAD1P61803 113 aa14.16□□□□□ -0.14
MMP28-207ENST00000619655 SPCS1Q9Y6A9 102 aa14.16□□□□□ -0.14
MMP28-207ENST00000619655 LEPROTO15243 131 aa14.15□□□□□ -0.14
MMP28-207ENST00000619655 GAGE6Q13070 117 aa14.15□□□□□ -0.14
MMP28-207ENST00000619655 TRAV13-1A0A0B4J241 112 aa14.15□□□□□ -0.14
MMP28-207ENST00000619655 A0A0J9YY99 117 aa14.15□□□□□ -0.14
MMP28-207ENST00000619655 PRO0255Q9UI72 69 aa14.15□□□□□ -0.14
MMP28-207ENST00000619655 TMEM238C9JI98 176 aa14.14□□□□□ -0.15
MMP28-207ENST00000619655 SPINK8P0C7L1 97 aa14.14□□□□□ -0.15
MMP28-207ENST00000619655 FABP2P12104 132 aa14.14□□□□□ -0.15
MMP28-207ENST00000619655 TRBV6-8A0A0A6YYG3 113 aa14.14□□□□□ -0.15
MMP28-207ENST00000619655 TMEM101Q96IK0 257 aa14.14□□□□□ -0.15
MMP28-207ENST00000619655 CHCHD5Q9BSY4 110 aa14.14□□□□□ -0.15
MMP28-207ENST00000619655 NHP2Q9NX24 153 aaKnown RBP14.13□□□□□ -0.15
MMP28-207ENST00000619655 K7ERJ3 54 aa14.13□□□□□ -0.15
MMP28-207ENST00000619655 IGHV3-30-3P0DP02 117 aa14.13□□□□□ -0.15
MMP28-207ENST00000619655 CDC42SE2Q9NRR3 84 aa14.13□□□□□ -0.15
MMP28-207ENST00000619655 CSDC2Q9Y534 153 aaKnown RBP14.13□□□□□ -0.15
MMP28-207ENST00000619655 A8MZ25 164 aa14.12□□□□□ -0.15
MMP28-207ENST00000619655 PAX4O43316 350 aa14.12□□□□□ -0.15
MMP28-207ENST00000619655 SRSF9Q13242 221 aaKnown RBP eCLIP14.12□□□□□ -0.15
MMP28-207ENST00000619655 TAL2Q16559 108 aa14.12□□□□□ -0.15
MMP28-207ENST00000619655 SAMD5Q5TGI4 173 aa14.12□□□□□ -0.15
MMP28-207ENST00000619655 ATP6V0E2Q8NHE4 81 aa14.12□□□□□ -0.15
MMP28-207ENST00000619655 RETNQ9HD89 108 aa14.12□□□□□ -0.15
MMP28-207ENST00000619655 CDKN2A-AS1Q9UH64 79 aa14.12□□□□□ -0.15
MMP28-207ENST00000619655 HTN3P15516 51 aa14.12□□□□□ -0.15
MMP28-207ENST00000619655 COX6A2Q02221 97 aa14.12□□□□□ -0.15
MMP28-207ENST00000619655 SMAGPQ0VAQ4 97 aa14.11□□□□□ -0.15
MMP28-207ENST00000619655 IGKV3OR2-268A0A0C4DH90 116 aa14.1□□□□□ -0.15
MMP28-207ENST00000619655 EGFEM1PQ0D2K5 195 aa14.1□□□□□ -0.15
MMP28-207ENST00000619655 LINC00242Q5T6M2 205 aa14.1□□□□□ -0.15
MMP28-207ENST00000619655 SPART-AS1P0CW21 52 aa14.09□□□□□ -0.15
MMP28-207ENST00000619655 IGHV1-58A0A0C4DH39 117 aa14.09□□□□□ -0.15
MMP28-207ENST00000619655 F5H768 121 aa14.08□□□□□ -0.16
MMP28-207ENST00000619655 ATP5G1P05496 136 aa14.08□□□□□ -0.16
MMP28-207ENST00000619655 IGLV4-60A0A075B6I1 120 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms