RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 TRRAPQ9Y4A5 3859 aa8.92□□□□□ -0.98
CIITA-212ENST00000618207 TRGV2A0A075B6R0 118 aa8.92□□□□□ -0.98
CIITA-212ENST00000618207 F8W1H4 67 aa8.92□□□□□ -0.98
CIITA-212ENST00000618207 MT-ATP8P03928 68 aa8.92□□□□□ -0.98
CIITA-212ENST00000618207 SPANXA1Q9NS26 97 aa8.92□□□□□ -0.98
CIITA-212ENST00000618207 C19orf73Q9NVV2 129 aa8.92□□□□□ -0.98
CIITA-212ENST00000618207 RHODO00212 210 aa8.91□□□□□ -0.98
CIITA-212ENST00000618207 RS1O15537 224 aa8.91□□□□□ -0.98
CIITA-212ENST00000618207 GAGE13Q4V321 117 aa8.91□□□□□ -0.98
CIITA-212ENST00000618207 TM2D2Q9BX73 214 aa8.91□□□□□ -0.98
CIITA-212ENST00000618207 SMIM9A6NGZ8 99 aa8.91□□□□□ -0.98
CIITA-212ENST00000618207 BEAN1Q3B7T3 259 aa8.91□□□□□ -0.98
CIITA-212ENST00000618207 SFTA2Q6UW10 78 aa8.91□□□□□ -0.98
CIITA-212ENST00000618207 TMEM263Q8WUH6 116 aaKnown RBP8.91□□□□□ -0.98
CIITA-212ENST00000618207 F8WDY8 70 aa8.9□□□□□ -0.98
CIITA-212ENST00000618207 NHLRC4P0CG21 123 aaPredicted RBP8.9□□□□□ -0.98
CIITA-212ENST00000618207 PAPPA-AS1Q5QFB9 102 aa8.9□□□□□ -0.98
CIITA-212ENST00000618207 CHCHD7Q9BUK0 85 aa8.9□□□□□ -0.98
CIITA-212ENST00000618207 LINC01549A6NIU2 74 aa8.9□□□□□ -0.98
CIITA-212ENST00000618207 NDUFA7O95182 113 aa8.9□□□□□ -0.98
CIITA-212ENST00000618207 Q6ZUT4 128 aa8.9□□□□□ -0.98
CIITA-212ENST00000618207 CDIP1Q9H305 208 aa8.9□□□□□ -0.98
CIITA-212ENST00000618207 TRAV8-3A0A0A6YYJ7 113 aa8.9□□□□□ -0.99
CIITA-212ENST00000618207 LOC100131303A0A0U1RQF7 123 aa8.9□□□□□ -0.99
CIITA-212ENST00000618207 SAMD5Q5TGI4 173 aa8.9□□□□□ -0.99
CIITA-212ENST00000618207 FAM104AQ969W3 186 aa8.9□□□□□ -0.99
CIITA-212ENST00000618207 A8MZ25 164 aa8.89□□□□□ -0.99
CIITA-212ENST00000618207 J3QQQ9 107 aa8.89□□□□□ -0.99
CIITA-212ENST00000618207 ZNF22P17026 224 aaPredicted RBP8.89□□□□□ -0.99
CIITA-212ENST00000618207 LGALS3P17931 250 aaKnown RBP8.89□□□□□ -0.99
CIITA-212ENST00000618207 RRN3P1Q2M238 152 aa8.89□□□□□ -0.99
CIITA-212ENST00000618207 DGAT2L7PQ6IED9 249 aa8.89□□□□□ -0.99
CIITA-212ENST00000618207 LINC00482Q8N8I6 264 aa8.89□□□□□ -0.99
CIITA-212ENST00000618207 SLC25A29Q8N8R3 303 aa8.89□□□□□ -0.99
CIITA-212ENST00000618207 TRBV7-3A0A075B6L6 115 aa8.89□□□□□ -0.99
CIITA-212ENST00000618207 WFDC2Q14508 124 aa8.89□□□□□ -0.99
CIITA-212ENST00000618207 ZFAND6Q6FIF0 208 aa8.88□□□□□ -0.99
CIITA-212ENST00000618207 CCDC179H3BU77 68 aa8.88□□□□□ -0.99
CIITA-212ENST00000618207 APOMO95445 188 aa8.88□□□□□ -0.99
CIITA-212ENST00000618207 DEFB130BP0DP73 79 aa8.88□□□□□ -0.99
CIITA-212ENST00000618207 DEFB130AP0DP74 79 aa8.88□□□□□ -0.99
CIITA-212ENST00000618207 C12orf74Q32Q52 190 aa8.88□□□□□ -0.99
CIITA-212ENST00000618207 NDUFA11Q86Y39 141 aa8.88□□□□□ -0.99
CIITA-212ENST00000618207 UBE2D4Q9Y2X8 147 aa8.88□□□□□ -0.99
CIITA-212ENST00000618207 LINC00694P0DN24 101 aa8.87□□□□□ -0.99
CIITA-212ENST00000618207 ETDBQ3ZM63 59 aa8.87□□□□□ -0.99
CIITA-212ENST00000618207 XGP55808 180 aa8.87□□□□□ -0.99
CIITA-212ENST00000618207 SH2D6Q7Z4S9 175 aa8.87□□□□□ -0.99
CIITA-212ENST00000618207 PLAC8L1A1L4L8 177 aa8.86□□□□□ -0.99
CIITA-212ENST00000618207 K7EQD1 137 aa8.86□□□□□ -0.99
CIITA-212ENST00000618207 RPL36AP83881 106 aaKnown RBP8.86□□□□□ -0.99
CIITA-212ENST00000618207 PIK3CD-AS1Q5SR53 167 aa8.86□□□□□ -0.99
CIITA-212ENST00000618207 RPL36ALQ969Q0 106 aaKnown RBP8.86□□□□□ -0.99
CIITA-212ENST00000618207 A0A0J9YY99 117 aa8.86□□□□□ -0.99
CIITA-212ENST00000618207 TMEM223A0PJW6 202 aa8.86□□□□□ -0.99
CIITA-212ENST00000618207 NFE4Q86UQ8 179 aa8.86□□□□□ -0.99
CIITA-212ENST00000618207 IL17DQ8TAD2 202 aa8.86□□□□□ -0.99
CIITA-212ENST00000618207 EDA2RQ9HAV5 297 aa8.86□□□□□ -0.99
CIITA-212ENST00000618207 TRGV4A0A0C4DH28 118 aa8.86□□□□□ -0.99
CIITA-212ENST00000618207 CRLF1O75462 422 aa8.86□□□□□ -0.99
CIITA-212ENST00000618207 CSNK1G2-AS1Q8NCQ2 148 aa8.86□□□□□ -0.99
CIITA-212ENST00000618207 DEFB4AO15263 64 aa8.85□□□□□ -0.99
CIITA-212ENST00000618207 INSL3P51460 131 aa8.85□□□□□ -0.99
CIITA-212ENST00000618207 CMC4P56277 68 aaPredicted RBP8.85□□□□□ -0.99
CIITA-212ENST00000618207 NTM-AS1Q6ZSK4 140 aa8.85□□□□□ -0.99
CIITA-212ENST00000618207 C16orf74Q96GX8 76 aa8.85□□□□□ -0.99
CIITA-212ENST00000618207 AMELXQ99217 191 aa8.85□□□□□ -0.99
CIITA-212ENST00000618207 TMEM126AQ9H061 195 aa8.85□□□□□ -0.99
CIITA-212ENST00000618207 TRAV4A0A0B4J268 109 aa8.84□□□□□ -0.99
CIITA-212ENST00000618207 IGKV3OR2-268A0A0C4DH90 116 aa8.84□□□□□ -0.99
CIITA-212ENST00000618207 TAL2Q16559 108 aa8.84□□□□□ -0.99
CIITA-212ENST00000618207 DNAJC30Q96LL9 226 aa8.84□□□□□ -0.99
CIITA-212ENST00000618207 PYGO1Q9Y3Y4 419 aa8.84□□□□□ -0.99
CIITA-212ENST00000618207 TRAV13-1A0A0B4J241 112 aa8.84□□□□□ -0.99
CIITA-212ENST00000618207 IGLL5B9A064 214 aa8.84□□□□□ -0.99
CIITA-212ENST00000618207 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.84□□□□□ -0.99
CIITA-212ENST00000618207 TIMM21Q9BVV7 248 aa8.84□□□□□ -0.99
CIITA-212ENST00000618207 IGHV3-30-3P0DP02 117 aa8.83□□□□□ -1
CIITA-212ENST00000618207 NPC2P61916 151 aa8.83□□□□□ -1
CIITA-212ENST00000618207 STAB1Q9NY15 2570 aa8.83□□□□□ -1
CIITA-212ENST00000618207 LEPROTO15243 131 aa8.82□□□□□ -1
CIITA-212ENST00000618207 NDUFV3P56181 108 aaKnown RBP8.82□□□□□ -1
CIITA-212ENST00000618207 MRPS36P82909 103 aaKnown RBP8.82□□□□□ -1
CIITA-212ENST00000618207 DAZ2Q13117 558 aaKnown RBP8.82□□□□□ -1
CIITA-212ENST00000618207 CDKN2A-AS1Q9UH64 79 aa8.82□□□□□ -1
CIITA-212ENST00000618207 C10orf126Q8N4M7 172 aa8.81□□□□□ -1
CIITA-212ENST00000618207 A0A096LPF7 62 aa8.81□□□□□ -1
CIITA-212ENST00000618207 COX6A2Q02221 97 aa8.81□□□□□ -1
CIITA-212ENST00000618207 FOXI1Q12951 378 aa8.81□□□□□ -1
CIITA-212ENST00000618207 H7C2G1 150 aa8.81□□□□□ -1
CIITA-212ENST00000618207 PRSS2P07478 247 aa8.81□□□□□ -1
CIITA-212ENST00000618207 DEFB135Q30KP9 77 aa8.81□□□□□ -1
CIITA-212ENST00000618207 LOC107984156A0A0G2JMH3 177 aa8.8□□□□□ -1
CIITA-212ENST00000618207 A0A0U1RRA0 63 aa8.8□□□□□ -1
CIITA-212ENST00000618207 H3BMG7 143 aa8.8□□□□□ -1
CIITA-212ENST00000618207 UBE2D3P61077 147 aa8.8□□□□□ -1
CIITA-212ENST00000618207 UBE2D2P62837 147 aa8.8□□□□□ -1
CIITA-212ENST00000618207 ARL17AQ8IVW1 177 aa8.8□□□□□ -1
CIITA-212ENST00000618207 ZNF625Q96I27 306 aaPredicted RBP8.8□□□□□ -1
CIITA-212ENST00000618207 F5H768 121 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms