RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 CRYBA4P53673 196 aa12.27□□□□□ -0.44
PCDHGC3-205ENST00000617641 LINC00612Q8N6U2 182 aa12.27□□□□□ -0.44
PCDHGC3-205ENST00000617641 TAX1BP3O14907 124 aa12.27□□□□□ -0.45
PCDHGC3-205ENST00000617641 ZNF22P17026 224 aaPredicted RBP12.27□□□□□ -0.45
PCDHGC3-205ENST00000617641 SEC11AP67812 179 aa12.27□□□□□ -0.45
PCDHGC3-205ENST00000617641 LINC00694P0DN24 101 aa12.26□□□□□ -0.45
PCDHGC3-205ENST00000617641 ZNF815PA8K554 130 aa12.26□□□□□ -0.45
PCDHGC3-205ENST00000617641 TSPEAR-AS2P59090 65 aa12.26□□□□□ -0.45
PCDHGC3-205ENST00000617641 OXLD1Q5BKU9 147 aa12.26□□□□□ -0.45
PCDHGC3-205ENST00000617641 DEFB4AO15263 64 aa12.25□□□□□ -0.45
PCDHGC3-205ENST00000617641 IGHV4-30-4P0DP06 118 aa12.25□□□□□ -0.45
PCDHGC3-205ENST00000617641 GCSHP23434 173 aa12.25□□□□□ -0.45
PCDHGC3-205ENST00000617641 C3orf56Q8N813 242 aa12.25□□□□□ -0.45
PCDHGC3-205ENST00000617641 TMEM223A0PJW6 202 aa12.24□□□□□ -0.45
PCDHGC3-205ENST00000617641 MRPS36P82909 103 aaKnown RBP12.24□□□□□ -0.45
PCDHGC3-205ENST00000617641 FAM222AQ5U5X8 452 aa12.24□□□□□ -0.45
PCDHGC3-205ENST00000617641 DGAT2L7PQ6IED9 249 aa12.23□□□□□ -0.45
PCDHGC3-205ENST00000617641 PRIMA1Q86XR5 153 aa12.23□□□□□ -0.45
PCDHGC3-205ENST00000617641 TIMM21Q9BVV7 248 aa12.23□□□□□ -0.45
PCDHGC3-205ENST00000617641 IGHV3-64A0A075B6Q5 118 aa12.23□□□□□ -0.45
PCDHGC3-205ENST00000617641 FXYD2P54710 66 aa12.23□□□□□ -0.45
PCDHGC3-205ENST00000617641 SBSPONQ8IVN8 264 aa12.23□□□□□ -0.45
PCDHGC3-205ENST00000617641 PLEKHB2Q96CS7 222 aa12.23□□□□□ -0.45
PCDHGC3-205ENST00000617641 A6NDN8 102 aa12.22□□□□□ -0.45
PCDHGC3-205ENST00000617641 IGHV4-28A0A0C4DH34 117 aa12.22□□□□□ -0.45
PCDHGC3-205ENST00000617641 GTSF1LQ9H1H1 148 aa12.22□□□□□ -0.45
PCDHGC3-205ENST00000617641 CEND1Q8N111 149 aa12.21□□□□□ -0.45
PCDHGC3-205ENST00000617641 J3QQQ9 107 aa12.21□□□□□ -0.46
PCDHGC3-205ENST00000617641 KRTAP10-11P60412 298 aa12.21□□□□□ -0.46
PCDHGC3-205ENST00000617641 SCGB1D4Q6XE38 83 aa12.21□□□□□ -0.46
PCDHGC3-205ENST00000617641 HIST1H4GQ99525 98 aa12.21□□□□□ -0.46
PCDHGC3-205ENST00000617641 TMEM243Q9BU79 118 aa12.21□□□□□ -0.46
PCDHGC3-205ENST00000617641 LYRM9A8MSI8 78 aa12.2□□□□□ -0.46
PCDHGC3-205ENST00000617641 CMYA5Q8N3K9 4069 aa12.2□□□□□ -0.46
PCDHGC3-205ENST00000617641 TINCRA0A1B0GVN0 87 aa12.2□□□□□ -0.46
PCDHGC3-205ENST00000617641 LEPROTO15243 131 aa12.2□□□□□ -0.46
PCDHGC3-205ENST00000617641 UBE2D1P51668 147 aa12.2□□□□□ -0.46
PCDHGC3-205ENST00000617641 SHISA2Q6UWI4 295 aa12.2□□□□□ -0.46
PCDHGC3-205ENST00000617641 A0A1B0GV72 72 aa12.19□□□□□ -0.46
PCDHGC3-205ENST00000617641 LGALS3P17931 250 aaKnown RBP12.19□□□□□ -0.46
PCDHGC3-205ENST00000617641 STAB1Q9NY15 2570 aa12.19□□□□□ -0.46
PCDHGC3-205ENST00000617641 TAL2Q16559 108 aa12.19□□□□□ -0.46
PCDHGC3-205ENST00000617641 Q8NAQ8 132 aa12.19□□□□□ -0.46
PCDHGC3-205ENST00000617641 TM2D2Q9BX73 214 aa12.19□□□□□ -0.46
PCDHGC3-205ENST00000617641 UBE2L6O14933 153 aa12.18□□□□□ -0.46
PCDHGC3-205ENST00000617641 CSDC2Q9Y534 153 aaKnown RBP12.18□□□□□ -0.46
PCDHGC3-205ENST00000617641 GYPEP15421 78 aa12.17□□□□□ -0.46
PCDHGC3-205ENST00000617641 VAMP3Q15836 100 aa12.17□□□□□ -0.46
PCDHGC3-205ENST00000617641 RNF183Q96D59 192 aa12.17□□□□□ -0.46
PCDHGC3-205ENST00000617641 TRAV8-3A0A0A6YYJ7 113 aa12.17□□□□□ -0.46
PCDHGC3-205ENST00000617641 AMMECR1LQ6DCA0 310 aa12.17□□□□□ -0.46
PCDHGC3-205ENST00000617641 OR5A1Q8NGJ0 315 aa12.17□□□□□ -0.46
PCDHGC3-205ENST00000617641 CELA1Q9UNI1 258 aa12.17□□□□□ -0.46
PCDHGC3-205ENST00000617641 H3BRM9 83 aa12.16□□□□□ -0.46
PCDHGC3-205ENST00000617641 MIFP14174 115 aa12.16□□□□□ -0.46
PCDHGC3-205ENST00000617641 RAB37Q96AX2 223 aa12.16□□□□□ -0.46
PCDHGC3-205ENST00000617641 GEMIN7Q9H840 131 aaKnown RBP12.16□□□□□ -0.46
PCDHGC3-205ENST00000617641 A0A0J9YY99 117 aa12.16□□□□□ -0.46
PCDHGC3-205ENST00000617641 CDC42SE2Q9NRR3 84 aa12.16□□□□□ -0.46
PCDHGC3-205ENST00000617641 PRO0255Q9UI72 69 aa12.16□□□□□ -0.46
PCDHGC3-205ENST00000617641 TRBV6-8A0A0A6YYG3 113 aa12.15□□□□□ -0.46
PCDHGC3-205ENST00000617641 IGHV3-30-3P0DP02 117 aa12.15□□□□□ -0.46
PCDHGC3-205ENST00000617641 K7ERJ3 54 aa12.15□□□□□ -0.46
PCDHGC3-205ENST00000617641 SPINK8P0C7L1 97 aa12.15□□□□□ -0.46
PCDHGC3-205ENST00000617641 DAD1P61803 113 aa12.15□□□□□ -0.46
PCDHGC3-205ENST00000617641 GAGE6Q13070 117 aa12.15□□□□□ -0.46
PCDHGC3-205ENST00000617641 NHP2Q9NX24 153 aaKnown RBP12.15□□□□□ -0.46
PCDHGC3-205ENST00000617641 COX6A2Q02221 97 aa12.14□□□□□ -0.47
PCDHGC3-205ENST00000617641 SMAGPQ0VAQ4 97 aa12.14□□□□□ -0.47
PCDHGC3-205ENST00000617641 NAA38Q9BRA0 125 aaKnown RBP12.14□□□□□ -0.47
PCDHGC3-205ENST00000617641 CDKN2A-AS1Q9UH64 79 aa12.14□□□□□ -0.47
PCDHGC3-205ENST00000617641 TRAV13-1A0A0B4J241 112 aa12.14□□□□□ -0.47
PCDHGC3-205ENST00000617641 SCGB1A1P11684 91 aa12.14□□□□□ -0.47
PCDHGC3-205ENST00000617641 EGFEM1PQ0D2K5 195 aa12.14□□□□□ -0.47
PCDHGC3-205ENST00000617641 PKD1L1Q8TDX9 2849 aa12.13□□□□□ -0.47
PCDHGC3-205ENST00000617641 SMIM13P0DJ93 91 aa12.13□□□□□ -0.47
PCDHGC3-205ENST00000617641 TIRAPP58753 221 aa12.13□□□□□ -0.47
PCDHGC3-205ENST00000617641 LINC00242Q5T6M2 205 aa12.13□□□□□ -0.47
PCDHGC3-205ENST00000617641 ATP6V0E2Q8NHE4 81 aa12.13□□□□□ -0.47
PCDHGC3-205ENST00000617641 TMEM101Q96IK0 257 aa12.13□□□□□ -0.47
PCDHGC3-205ENST00000617641 IGHV1-58A0A0C4DH39 117 aa12.12□□□□□ -0.47
PCDHGC3-205ENST00000617641 C9orf118A6NHY6 69 aa12.12□□□□□ -0.47
PCDHGC3-205ENST00000617641 SRSF9Q13242 221 aaKnown RBP eCLIP12.12□□□□□ -0.47
PCDHGC3-205ENST00000617641 CHCHD5Q9BSY4 110 aa12.12□□□□□ -0.47
PCDHGC3-205ENST00000617641 MAST4O15021 2626 aa12.12□□□□□ -0.47
PCDHGC3-205ENST00000617641 A8MZ25 164 aa12.12□□□□□ -0.47
PCDHGC3-205ENST00000617641 H7C423 109 aa12.12□□□□□ -0.47
PCDHGC3-205ENST00000617641 PAX4O43316 350 aa12.12□□□□□ -0.47
PCDHGC3-205ENST00000617641 IGLV5-45A0A087WSX0 123 aa12.11□□□□□ -0.47
PCDHGC3-205ENST00000617641 A0A096LPF7 62 aa12.11□□□□□ -0.47
PCDHGC3-205ENST00000617641 VSIG2Q96IQ7 327 aa12.11□□□□□ -0.47
PCDHGC3-205ENST00000617641 H3BUT2 72 aa12.11□□□□□ -0.47
PCDHGC3-205ENST00000617641 HERVK_113P63121 156 aa12.1□□□□□ -0.47
PCDHGC3-205ENST00000617641 C10orf126Q8N4M7 172 aa12.1□□□□□ -0.47
PCDHGC3-205ENST00000617641 IGLV4-60A0A075B6I1 120 aa12.1□□□□□ -0.47
PCDHGC3-205ENST00000617641 SPART-AS1P0CW21 52 aa12.1□□□□□ -0.47
PCDHGC3-205ENST00000617641 FAM19A3Q7Z5A8 133 aa12.1□□□□□ -0.47
PCDHGC3-205ENST00000617641 RETNQ9HD89 108 aa12.1□□□□□ -0.47
PCDHGC3-205ENST00000617641 G3V4G9 280 aa12.09□□□□□ -0.47
PCDHGC3-205ENST00000617641 ATP5G1P05496 136 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms