RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 LYZP61626 148 aa6.08□□□□□ -1.44
GPC6-202ENST00000617456 SPANXN5Q5MJ07 72 aa6.08□□□□□ -1.44
GPC6-202ENST00000617456 Q6ZRU5 148 aa6.08□□□□□ -1.44
GPC6-202ENST00000617456 C2orf48Q96LS8 159 aa6.08□□□□□ -1.44
GPC6-202ENST00000617456 SHANK2-AS3Q9BTD1 123 aa6.08□□□□□ -1.44
GPC6-202ENST00000617456 OSTCQ9NRP0 149 aa6.08□□□□□ -1.44
GPC6-202ENST00000617456 PMS2P5A8MQ11 134 aa6.07□□□□□ -1.44
GPC6-202ENST00000617456 H7C1H1 209 aa6.07□□□□□ -1.44
GPC6-202ENST00000617456 SCGB1C2P0DMR2 95 aa6.07□□□□□ -1.44
GPC6-202ENST00000617456 CXCL5P42830 114 aa6.07□□□□□ -1.44
GPC6-202ENST00000617456 C1orf134Q5TEV5 83 aa6.07□□□□□ -1.44
GPC6-202ENST00000617456 Q6ZR54 194 aa6.07□□□□□ -1.44
GPC6-202ENST00000617456 AMN1Q8IY45 258 aa6.07□□□□□ -1.44
GPC6-202ENST00000617456 OR5C1Q8NGR4 320 aa6.07□□□□□ -1.44
GPC6-202ENST00000617456 C16orf92Q96LL3 132 aa6.07□□□□□ -1.44
GPC6-202ENST00000617456 PSENENQ9NZ42 101 aa6.07□□□□□ -1.44
GPC6-202ENST00000617456 XCL2Q9UBD3 114 aa6.07□□□□□ -1.44
GPC6-202ENST00000617456 LRP1BQ9NZR2 4599 aa6.06□□□□□ -1.44
GPC6-202ENST00000617456 TRAV13-1A0A0B4J241 112 aa6.06□□□□□ -1.44
GPC6-202ENST00000617456 NDUFB4O95168 129 aa6.06□□□□□ -1.44
GPC6-202ENST00000617456 PYYP10082 97 aa6.06□□□□□ -1.44
GPC6-202ENST00000617456 HTN3P15516 51 aa6.06□□□□□ -1.44
GPC6-202ENST00000617456 Q6ZQT7 251 aa6.06□□□□□ -1.44
GPC6-202ENST00000617456 FAM19A4Q96LR4 140 aa6.06□□□□□ -1.44
GPC6-202ENST00000617456 IGF2BP2-AS1Q96M15 143 aa6.06□□□□□ -1.44
GPC6-202ENST00000617456 V9GYV3 84 aa6.06□□□□□ -1.44
GPC6-202ENST00000617456 SMIM27A0A1W2PRY6 76 aa6.05□□□□□ -1.44
GPC6-202ENST00000617456 H3BRN7 92 aa6.05□□□□□ -1.44
GPC6-202ENST00000617456 CDK2AP2O75956 126 aa6.05□□□□□ -1.44
GPC6-202ENST00000617456 VPREB1P12018 145 aa6.05□□□□□ -1.44
GPC6-202ENST00000617456 FXYD2P54710 66 aa6.05□□□□□ -1.44
GPC6-202ENST00000617456 UBE2D3P61077 147 aa6.05□□□□□ -1.44
GPC6-202ENST00000617456 UBE2D2P62837 147 aa6.05□□□□□ -1.44
GPC6-202ENST00000617456 GDF5OSQ5U4N7 250 aa6.05□□□□□ -1.44
GPC6-202ENST00000617456 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.05□□□□□ -1.44
GPC6-202ENST00000617456 ATP5L2Q7Z4Y8 100 aa6.05□□□□□ -1.44
GPC6-202ENST00000617456 C11orf52Q96A22 123 aa6.05□□□□□ -1.44
GPC6-202ENST00000617456 C17orf77Q96MU5 243 aa6.05□□□□□ -1.44
GPC6-202ENST00000617456 CHCHD5Q9BSY4 110 aa6.05□□□□□ -1.44
GPC6-202ENST00000617456 DKK2Q9UBU2 259 aa6.05□□□□□ -1.44
GPC6-202ENST00000617456 TP73-AS1Q9UF72 201 aa6.05□□□□□ -1.44
GPC6-202ENST00000617456 HERC1Q15751 4861 aa6.04□□□□□ -1.44
GPC6-202ENST00000617456 IGHV3OR16-12A0A075B7B8 117 aa6.04□□□□□ -1.44
GPC6-202ENST00000617456 SMIM26A0A096LP01 95 aa6.04□□□□□ -1.44
GPC6-202ENST00000617456 LYRM9A8MSI8 78 aa6.04□□□□□ -1.44
GPC6-202ENST00000617456 IGKCP01834 107 aa6.04□□□□□ -1.44
GPC6-202ENST00000617456 HIST1H4AP62805 103 aaKnown RBP6.04□□□□□ -1.44
GPC6-202ENST00000617456 ZNF493Q6ZR52 646 aa6.04□□□□□ -1.44
GPC6-202ENST00000617456 COPS9Q8WXC6 57 aa6.04□□□□□ -1.44
GPC6-202ENST00000617456 URB1-AS1Q96HZ7 61 aa6.04□□□□□ -1.44
GPC6-202ENST00000617456 SLC25A22Q9H936 323 aa6.04□□□□□ -1.44
GPC6-202ENST00000617456 SERP1Q9Y6X1 66 aa6.04□□□□□ -1.44
GPC6-202ENST00000617456 DMBT1Q9UGM3 2413 aaPredicted RBP6.04□□□□□ -1.44
GPC6-202ENST00000617456 A0A087WWL8 130 aa6.03□□□□□ -1.44
GPC6-202ENST00000617456 TRAV26-2A0A0B4J265 109 aa6.03□□□□□ -1.44
GPC6-202ENST00000617456 H3BP45 60 aa6.03□□□□□ -1.44
GPC6-202ENST00000617456 ATOX1O00244 68 aa6.03□□□□□ -1.44
GPC6-202ENST00000617456 ACYP1P07311 99 aa6.03□□□□□ -1.44
GPC6-202ENST00000617456 FXYD7P58549 80 aa6.03□□□□□ -1.44
GPC6-202ENST00000617456 Q8N1X5 172 aa6.03□□□□□ -1.44
GPC6-202ENST00000617456 SLC50A1Q9BRV3 221 aa6.03□□□□□ -1.44
GPC6-202ENST00000617456 SLC25A2Q9BXI2 301 aa6.03□□□□□ -1.44
GPC6-202ENST00000617456 NACAE9PAV3 2078 aa6.02□□□□□ -1.45
GPC6-202ENST00000617456 TRAV8-2A0A0B4J237 113 aa6.02□□□□□ -1.45
GPC6-202ENST00000617456 A0A0U1RQV1 116 aa6.02□□□□□ -1.45
GPC6-202ENST00000617456 INSP01308 110 aa6.02□□□□□ -1.45
GPC6-202ENST00000617456 IGKV3-20P01619 116 aa6.02□□□□□ -1.45
GPC6-202ENST00000617456 MRPS36P82909 103 aaKnown RBP6.02□□□□□ -1.45
GPC6-202ENST00000617456 NEXN-AS1Q8NBZ9 246 aa6.02□□□□□ -1.45
GPC6-202ENST00000617456 MRPL53Q96EL3 112 aaKnown RBP6.02□□□□□ -1.45
GPC6-202ENST00000617456 USP17L23D6RBM5 183 aa6.01□□□□□ -1.45
GPC6-202ENST00000617456 F6UB75 175 aa6.01□□□□□ -1.45
GPC6-202ENST00000617456 H3BTX0 84 aa6.01□□□□□ -1.45
GPC6-202ENST00000617456 MRPS12O15235 138 aaKnown RBP6.01□□□□□ -1.45
GPC6-202ENST00000617456 CST7O76096 145 aa6.01□□□□□ -1.45
GPC6-202ENST00000617456 NPYP01303 97 aa6.01□□□□□ -1.45
GPC6-202ENST00000617456 SRSF9Q13242 221 aaKnown RBP eCLIP6.01□□□□□ -1.45
GPC6-202ENST00000617456 ZC2HC1BQ5TFG8 222 aa6.01□□□□□ -1.45
GPC6-202ENST00000617456 FAM222AQ5U5X8 452 aa6.01□□□□□ -1.45
GPC6-202ENST00000617456 PATE2Q6UY27 113 aa6.01□□□□□ -1.45
GPC6-202ENST00000617456 LINC00305Q7Z4B0 112 aa6.01□□□□□ -1.45
GPC6-202ENST00000617456 C5orf38Q86SI9 138 aa6.01□□□□□ -1.45
GPC6-202ENST00000617456 PRR15Q8IV56 129 aa6.01□□□□□ -1.45
GPC6-202ENST00000617456 OR8A1Q8NGG7 326 aa6.01□□□□□ -1.45
GPC6-202ENST00000617456 UPK3BQ9BT76 320 aa6.01□□□□□ -1.45
GPC6-202ENST00000617456 ZNF331Q9NQX6 463 aaPredicted RBP6.01□□□□□ -1.45
GPC6-202ENST00000617456 APOBP04114 4563 aaKnown RBP6.01□□□□□ -1.45
GPC6-202ENST00000617456 TRAV8-4A0A0B4J246 113 aa6□□□□□ -1.45
GPC6-202ENST00000617456 MYMXA0A1B0GTQ4 84 aa6□□□□□ -1.45
GPC6-202ENST00000617456 GCHFRP30047 84 aa6□□□□□ -1.45
GPC6-202ENST00000617456 DEFB1P60022 68 aa6□□□□□ -1.45
GPC6-202ENST00000617456 DAD1P61803 113 aa6□□□□□ -1.45
GPC6-202ENST00000617456 HBG1P69891 147 aa6□□□□□ -1.45
GPC6-202ENST00000617456 HBG2P69892 147 aa6□□□□□ -1.45
GPC6-202ENST00000617456 TMEM170BQ5T4T1 132 aa6□□□□□ -1.45
GPC6-202ENST00000617456 SDIM1Q6ZPB5 146 aa6□□□□□ -1.45
GPC6-202ENST00000617456 C6orf223Q8N319 242 aa6□□□□□ -1.45
GPC6-202ENST00000617456 MGST2Q99735 147 aa6□□□□□ -1.45
GPC6-202ENST00000617456 CHAC1Q9BUX1 264 aa6□□□□□ -1.45
GPC6-202ENST00000617456 DPH3P1Q9H4G8 78 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms