RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 RHOHQ15669 191 aa5.5□□□□□ -1.53
NEK3-207ENST00000617054 TMEM170BQ5T4T1 132 aa5.5□□□□□ -1.53
NEK3-207ENST00000617054 C2orf91Q6ZV80 131 aa5.5□□□□□ -1.53
NEK3-207ENST00000617054 TRAV12-1A0A0B4J245 112 aa5.49□□□□□ -1.53
NEK3-207ENST00000617054 VCX2Q9H322 139 aa5.49□□□□□ -1.53
NEK3-207ENST00000617054 EDA2RQ9HAV5 297 aa5.49□□□□□ -1.53
NEK3-207ENST00000617054 Q6ZUT4 128 aa5.49□□□□□ -1.53
NEK3-207ENST00000617054 TIMM17AQ99595 171 aa5.49□□□□□ -1.53
NEK3-207ENST00000617054 UBE2D4Q9Y2X8 147 aa5.49□□□□□ -1.53
NEK3-207ENST00000617054 UBE2D3P61077 147 aa5.49□□□□□ -1.53
NEK3-207ENST00000617054 UBE2D2P62837 147 aa5.49□□□□□ -1.53
NEK3-207ENST00000617054 COL7A1Q02388 2944 aa5.48□□□□□ -1.53
NEK3-207ENST00000617054 WIPF1O43516 503 aa5.48□□□□□ -1.53
NEK3-207ENST00000617054 PLNP26678 52 aa5.48□□□□□ -1.53
NEK3-207ENST00000617054 BOD1L2Q8IYS8 172 aa5.48□□□□□ -1.53
NEK3-207ENST00000617054 TMEM141Q96I45 108 aa5.48□□□□□ -1.53
NEK3-207ENST00000617054 IGKV3OR2-268A0A0C4DH90 116 aa5.48□□□□□ -1.53
NEK3-207ENST00000617054 K7EP13 123 aa5.48□□□□□ -1.53
NEK3-207ENST00000617054 Q8NAQ8 132 aa5.48□□□□□ -1.53
NEK3-207ENST00000617054 KIR2DL5BQ8NHK3 375 aa5.48□□□□□ -1.53
NEK3-207ENST00000617054 DNAJC30Q96LL9 226 aa5.48□□□□□ -1.53
NEK3-207ENST00000617054 A8MZ25 164 aa5.47□□□□□ -1.53
NEK3-207ENST00000617054 GYPEP15421 78 aa5.47□□□□□ -1.53
NEK3-207ENST00000617054 MRAPQ8TCY5 172 aa5.47□□□□□ -1.53
NEK3-207ENST00000617054 MRPS16Q9Y3D3 137 aaKnown RBP5.47□□□□□ -1.53
NEK3-207ENST00000617054 RNF151Q2KHN1 245 aa5.47□□□□□ -1.53
NEK3-207ENST00000617054 CHAC1Q9BUX1 264 aa5.47□□□□□ -1.53
NEK3-207ENST00000617054 TRBV6-4A0A1B0GX49 114 aa5.47□□□□□ -1.53
NEK3-207ENST00000617054 GAGE6Q13070 117 aa5.47□□□□□ -1.53
NEK3-207ENST00000617054 RNF183Q96D59 192 aa5.47□□□□□ -1.53
NEK3-207ENST00000617054 PRADC1Q9BSG0 188 aa5.47□□□□□ -1.53
NEK3-207ENST00000617054 LYSTQ99698 3801 aa5.46□□□□□ -1.53
NEK3-207ENST00000617054 TRBV10-1A0A0K0K1A3 114 aa5.46□□□□□ -1.54
NEK3-207ENST00000617054 DAD1P61803 113 aa5.46□□□□□ -1.54
NEK3-207ENST00000617054 TRBV25-1A0A075B6N4 114 aa5.46□□□□□ -1.54
NEK3-207ENST00000617054 TRAV8-3A0A0A6YYJ7 113 aa5.46□□□□□ -1.54
NEK3-207ENST00000617054 TRAV13-1A0A0B4J241 112 aa5.46□□□□□ -1.54
NEK3-207ENST00000617054 SMIM9A6NGZ8 99 aa5.46□□□□□ -1.54
NEK3-207ENST00000617054 F5H768 121 aa5.46□□□□□ -1.54
NEK3-207ENST00000617054 DLEU1O43261 78 aa5.46□□□□□ -1.54
NEK3-207ENST00000617054 TSPEAR-AS2P59090 65 aa5.46□□□□□ -1.54
NEK3-207ENST00000617054 TRAV26-1A0A087WT03 109 aa5.45□□□□□ -1.54
NEK3-207ENST00000617054 CRYBA4P53673 196 aa5.45□□□□□ -1.54
NEK3-207ENST00000617054 EGFEM1PQ0D2K5 195 aa5.45□□□□□ -1.54
NEK3-207ENST00000617054 DAZ4Q86SG3 579 aaKnown RBP5.45□□□□□ -1.54
NEK3-207ENST00000617054 DAZ3Q9NR90 486 aaKnown RBP5.45□□□□□ -1.54
NEK3-207ENST00000617054 COX6A2Q02221 97 aa5.45□□□□□ -1.54
NEK3-207ENST00000617054 DEFB121Q5J5C9 76 aa5.45□□□□□ -1.54
NEK3-207ENST00000617054 BVES-AS1Q5T3Y7 98 aa5.45□□□□□ -1.54
NEK3-207ENST00000617054 Q8N3U1 123 aa5.45□□□□□ -1.54
NEK3-207ENST00000617054 PAX4O43316 350 aa5.45□□□□□ -1.54
NEK3-207ENST00000617054 LINC00612Q8N6U2 182 aa5.45□□□□□ -1.54
NEK3-207ENST00000617054 PLEKHB2Q96CS7 222 aa5.45□□□□□ -1.54
NEK3-207ENST00000617054 VSIG2Q96IQ7 327 aa5.45□□□□□ -1.54
NEK3-207ENST00000617054 AMELXQ99217 191 aa5.45□□□□□ -1.54
NEK3-207ENST00000617054 CHCHD5Q9BSY4 110 aa5.45□□□□□ -1.54
NEK3-207ENST00000617054 IGLV4-60A0A075B6I1 120 aa5.44□□□□□ -1.54
NEK3-207ENST00000617054 UBE2L6O14933 153 aa5.44□□□□□ -1.54
NEK3-207ENST00000617054 ZNF22P17026 224 aaPredicted RBP5.44□□□□□ -1.54
NEK3-207ENST00000617054 SBSPONQ8IVN8 264 aa5.44□□□□□ -1.54
NEK3-207ENST00000617054 PYGO1Q9Y3Y4 419 aa5.44□□□□□ -1.54
NEK3-207ENST00000617054 AMMECR1LQ6DCA0 310 aa5.44□□□□□ -1.54
NEK3-207ENST00000617054 PRO0255Q9UI72 69 aa5.44□□□□□ -1.54
NEK3-207ENST00000617054 ZNF815PA8K554 130 aa5.43□□□□□ -1.54
NEK3-207ENST00000617054 LYRM9A8MSI8 78 aa5.43□□□□□ -1.54
NEK3-207ENST00000617054 E9PLD3 99 aa5.43□□□□□ -1.54
NEK3-207ENST00000617054 TMEM262E9PQX1 116 aa5.43□□□□□ -1.54
NEK3-207ENST00000617054 SPINK8P0C7L1 97 aa5.43□□□□□ -1.54
NEK3-207ENST00000617054 MIFP14174 115 aa5.43□□□□□ -1.54
NEK3-207ENST00000617054 TMEM97Q5BJF2 176 aa5.43□□□□□ -1.54
NEK3-207ENST00000617054 COL5A1-AS1Q5SY13 56 aa5.43□□□□□ -1.54
NEK3-207ENST00000617054 CLPSL2Q6UWE3 100 aa5.43□□□□□ -1.54
NEK3-207ENST00000617054 NAA38Q9BRA0 125 aaKnown RBP5.43□□□□□ -1.54
NEK3-207ENST00000617054 DNHD1Q96M86 4753 aa5.43□□□□□ -1.54
NEK3-207ENST00000617054 CSMD3Q7Z407 3707 aa5.43□□□□□ -1.54
NEK3-207ENST00000617054 TRBV6-8A0A0A6YYG3 113 aa5.43□□□□□ -1.54
NEK3-207ENST00000617054 GCSHP23434 173 aa5.43□□□□□ -1.54
NEK3-207ENST00000617054 ATP6V0E2Q8NHE4 81 aa5.43□□□□□ -1.54
NEK3-207ENST00000617054 TMEM243Q9BU79 118 aa5.43□□□□□ -1.54
NEK3-207ENST00000617054 HUWE1Q7Z6Z7 4374 aaKnown RBP5.43□□□□□ -1.54
NEK3-207ENST00000617054 SPART-AS1P0CW21 52 aa5.43□□□□□ -1.54
NEK3-207ENST00000617054 SPANXA1Q9NS26 97 aa5.43□□□□□ -1.54
NEK3-207ENST00000617054 CDKN2A-AS1Q9UH64 79 aa5.43□□□□□ -1.54
NEK3-207ENST00000617054 MYMXA0A1B0GTQ4 84 aa5.42□□□□□ -1.54
NEK3-207ENST00000617054 LINC01549A6NIU2 74 aa5.42□□□□□ -1.54
NEK3-207ENST00000617054 CCL25O15444 150 aa5.42□□□□□ -1.54
NEK3-207ENST00000617054 SCGB1D4Q6XE38 83 aa5.42□□□□□ -1.54
NEK3-207ENST00000617054 RAB37Q96AX2 223 aa5.42□□□□□ -1.54
NEK3-207ENST00000617054 STAB2Q8WWQ8 2551 aa5.42□□□□□ -1.54
NEK3-207ENST00000617054 A0A0J9YWU9 116 aa5.42□□□□□ -1.54
NEK3-207ENST00000617054 TMEM223A0PJW6 202 aa5.42□□□□□ -1.54
NEK3-207ENST00000617054 FXYD2P54710 66 aa5.42□□□□□ -1.54
NEK3-207ENST00000617054 C12orf74Q32Q52 190 aa5.42□□□□□ -1.54
NEK3-207ENST00000617054 NFE4Q86UQ8 179 aa5.42□□□□□ -1.54
NEK3-207ENST00000617054 OR5A1Q8NGJ0 315 aa5.42□□□□□ -1.54
NEK3-207ENST00000617054 CDC42SE2Q9NRR3 84 aa5.42□□□□□ -1.54
NEK3-207ENST00000617054 ATP5G1P05496 136 aa5.42□□□□□ -1.54
NEK3-207ENST00000617054 UBE2D1P51668 147 aa5.42□□□□□ -1.54
NEK3-207ENST00000617054 MRPS36P82909 103 aaKnown RBP5.42□□□□□ -1.54
NEK3-207ENST00000617054 Q6ZTC4 211 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms