RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 C20orf78Q9BR46 151 aa2.83□□□□□ -1.96
LTN1-207ENST00000614971 TRAV8-4A0A0B4J246 113 aa2.83□□□□□ -1.96
LTN1-207ENST00000614971 IGLV2-11P01706 119 aa2.83□□□□□ -1.96
LTN1-207ENST00000614971 MUSTN1Q8IVN3 82 aa2.83□□□□□ -1.96
LTN1-207ENST00000614971 CEND1Q8N111 149 aa2.83□□□□□ -1.96
LTN1-207ENST00000614971 NKAPP1Q8N9T2 125 aa2.83□□□□□ -1.96
LTN1-207ENST00000614971 LINC00467Q9BRT7 94 aa2.83□□□□□ -1.96
LTN1-207ENST00000614971 IGKV2D-26A0A0A0MRZ7 120 aa2.82□□□□□ -1.96
LTN1-207ENST00000614971 C12orf74Q32Q52 190 aa2.82□□□□□ -1.96
LTN1-207ENST00000614971 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.82□□□□□ -1.96
LTN1-207ENST00000614971 NCR3O14931 201 aa2.82□□□□□ -1.96
LTN1-207ENST00000614971 PRO1854Q9UHT4 67 aa2.82□□□□□ -1.96
LTN1-207ENST00000614971 CAMK2N2Q96S95 79 aa2.82□□□□□ -1.96
LTN1-207ENST00000614971 XAGE1AQ9HD64 81 aa2.82□□□□□ -1.96
LTN1-207ENST00000614971 K7EMT4 169 aa2.82□□□□□ -1.96
LTN1-207ENST00000614971 CTRLP40313 264 aa2.82□□□□□ -1.96
LTN1-207ENST00000614971 UBE2BP63146 152 aa2.82□□□□□ -1.96
LTN1-207ENST00000614971 HAMPP81172 84 aa2.82□□□□□ -1.96
LTN1-207ENST00000614971 ODF1Q14990 250 aa2.82□□□□□ -1.96
LTN1-207ENST00000614971 SLC25A29Q8N8R3 303 aa2.82□□□□□ -1.96
LTN1-207ENST00000614971 C16orf74Q96GX8 76 aa2.82□□□□□ -1.96
LTN1-207ENST00000614971 CLEC2BQ92478 149 aa2.82□□□□□ -1.96
LTN1-207ENST00000614971 CDKN2A-AS1Q9UH64 79 aa2.82□□□□□ -1.96
LTN1-207ENST00000614971 CELSR1Q9NYQ6 3014 aa2.82□□□□□ -1.96
LTN1-207ENST00000614971 TIMM17AQ99595 171 aa2.82□□□□□ -1.96
LTN1-207ENST00000614971 LENEPQ9Y5L5 61 aa2.82□□□□□ -1.96
LTN1-207ENST00000614971 Q8N6K4 173 aa2.81□□□□□ -1.96
LTN1-207ENST00000614971 NTN5Q8WTR8 489 aaPredicted RBP2.81□□□□□ -1.96
LTN1-207ENST00000614971 STAB2Q8WWQ8 2551 aa2.81□□□□□ -1.96
LTN1-207ENST00000614971 EBI3Q14213 229 aa2.81□□□□□ -1.96
LTN1-207ENST00000614971 WFDC2Q14508 124 aa2.81□□□□□ -1.96
LTN1-207ENST00000614971 A0A1B0GXF2 115 aa2.81□□□□□ -1.96
LTN1-207ENST00000614971 C9orf118A6NHY6 69 aa2.81□□□□□ -1.96
LTN1-207ENST00000614971 RNASE3P12724 160 aaKnown RBP2.81□□□□□ -1.96
LTN1-207ENST00000614971 MYCNOSP40205 109 aa2.81□□□□□ -1.96
LTN1-207ENST00000614971 HERVK_113P63121 156 aa2.81□□□□□ -1.96
LTN1-207ENST00000614971 MRPL23Q16540 153 aaKnown RBP2.81□□□□□ -1.96
LTN1-207ENST00000614971 LINC01545Q5VT33 79 aa2.81□□□□□ -1.96
LTN1-207ENST00000614971 SMG1Q96Q15 3661 aaKnown RBP2.81□□□□□ -1.96
LTN1-207ENST00000614971 A0A1W2PPM0 123 aa2.81□□□□□ -1.96
LTN1-207ENST00000614971 LRCOL1A6NCL2 159 aa2.81□□□□□ -1.96
LTN1-207ENST00000614971 PIK3CD-AS1Q5SR53 167 aa2.81□□□□□ -1.96
LTN1-207ENST00000614971 MIR7-3HGQ8N6C7 128 aa2.81□□□□□ -1.96
LTN1-207ENST00000614971 TMEM263Q8WUH6 116 aaKnown RBP2.81□□□□□ -1.96
LTN1-207ENST00000614971 CARD19Q96LW7 228 aa2.81□□□□□ -1.96
LTN1-207ENST00000614971 SND1-IT1Q9HBX3 110 aa2.81□□□□□ -1.96
LTN1-207ENST00000614971 CCL18P55774 89 aa2.81□□□□□ -1.96
LTN1-207ENST00000614971 SPATA12Q7Z6I5 190 aa2.81□□□□□ -1.96
LTN1-207ENST00000614971 SIGMAR1Q99720 223 aa2.81□□□□□ -1.96
LTN1-207ENST00000614971 TMEM126AQ9H061 195 aa2.81□□□□□ -1.96
LTN1-207ENST00000614971 COX7A2LO14548 114 aa2.8□□□□□ -1.96
LTN1-207ENST00000614971 CRIP2P52943 208 aaPredicted RBP2.8□□□□□ -1.96
LTN1-207ENST00000614971 COA6Q5JTJ3 125 aaKnown RBP2.8□□□□□ -1.96
LTN1-207ENST00000614971 C11orf45Q8TAV5 145 aa2.8□□□□□ -1.96
LTN1-207ENST00000614971 DCANP1Q8TF63 244 aa2.8□□□□□ -1.96
LTN1-207ENST00000614971 ICOSQ9Y6W8 199 aa2.8□□□□□ -1.96
LTN1-207ENST00000614971 IGLC6P0CF74 106 aa2.8□□□□□ -1.96
LTN1-207ENST00000614971 FOXI1Q12951 378 aa2.8□□□□□ -1.96
LTN1-207ENST00000614971 MAPKAPK5-AS1Q8N8E1 139 aa2.8□□□□□ -1.96
LTN1-207ENST00000614971 C20orf203Q8NBC4 194 aa2.8□□□□□ -1.96
LTN1-207ENST00000614971 ANAPC13Q9BS18 74 aa2.8□□□□□ -1.96
LTN1-207ENST00000614971 KMT2BQ9UMN6 2715 aaPredicted RBP2.8□□□□□ -1.96
LTN1-207ENST00000614971 TEX48A0A1B0GUV7 120 aa2.8□□□□□ -1.96
LTN1-207ENST00000614971 TAL2Q16559 108 aa2.8□□□□□ -1.96
LTN1-207ENST00000614971 PRO0255Q9UI72 69 aa2.8□□□□□ -1.96
LTN1-207ENST00000614971 DEFB131BA0A096LNP1 70 aa2.8□□□□□ -1.96
LTN1-207ENST00000614971 KIR2DL5BA0A0G2JN68 375 aa2.8□□□□□ -1.96
LTN1-207ENST00000614971 KIR2DL5BA0A0G2JPC4 375 aa2.8□□□□□ -1.96
LTN1-207ENST00000614971 ODF3L2Q3SX64 289 aa2.8□□□□□ -1.96
LTN1-207ENST00000614971 KIR2DL5AQ8N109 375 aa2.8□□□□□ -1.96
LTN1-207ENST00000614971 RNF185Q96GF1 192 aa2.8□□□□□ -1.96
LTN1-207ENST00000614971 NANOS2P60321 138 aaKnown RBP2.8□□□□□ -1.96
LTN1-207ENST00000614971 SPAG11BQ08648 103 aa2.8□□□□□ -1.96
LTN1-207ENST00000614971 ZNF580Q9UK33 172 aa2.8□□□□□ -1.96
LTN1-207ENST00000614971 COL27A1Q8IZC6 1860 aaPredicted RBP2.79□□□□□ -1.96
LTN1-207ENST00000614971 TRBV20-1A0A075B6N2 111 aa2.79□□□□□ -1.96
LTN1-207ENST00000614971 TRBV6-1A0A0K0K1D8 114 aa2.79□□□□□ -1.96
LTN1-207ENST00000614971 CFAP126Q5VTH2 177 aa2.79□□□□□ -1.96
LTN1-207ENST00000614971 NEXN-AS1Q8NBZ9 246 aa2.79□□□□□ -1.96
LTN1-207ENST00000614971 PRSS47A8MTI9 375 aa2.79□□□□□ -1.96
LTN1-207ENST00000614971 CFC1BP0CG36 223 aa2.79□□□□□ -1.96
LTN1-207ENST00000614971 CFC1P0CG37 223 aa2.79□□□□□ -1.96
LTN1-207ENST00000614971 GAGE12HA6NDE8 117 aa2.79□□□□□ -1.96
LTN1-207ENST00000614971 SLPIP03973 132 aa2.79□□□□□ -1.96
LTN1-207ENST00000614971 COX7B2Q8TF08 81 aa2.79□□□□□ -1.96
LTN1-207ENST00000614971 TOMM6Q96B49 74 aa2.79□□□□□ -1.96
LTN1-207ENST00000614971 CLUHP3Q96NS8 147 aa2.79□□□□□ -1.96
LTN1-207ENST00000614971 PSMG3-AS1Q96PY0 264 aa2.79□□□□□ -1.96
LTN1-207ENST00000614971 Q9UF83 564 aa2.79□□□□□ -1.96
LTN1-207ENST00000614971 M0QY20 66 aa2.79□□□□□ -1.96
LTN1-207ENST00000614971 DAZ2Q13117 558 aaKnown RBP2.79□□□□□ -1.96
LTN1-207ENST00000614971 DAZ4Q86SG3 579 aaKnown RBP2.79□□□□□ -1.96
LTN1-207ENST00000614971 DAZ3Q9NR90 486 aaKnown RBP2.79□□□□□ -1.96
LTN1-207ENST00000614971 SVEP1Q4LDE5 3571 aa2.79□□□□□ -1.96
LTN1-207ENST00000614971 CSMD1Q96PZ7 3565 aa2.79□□□□□ -1.96
LTN1-207ENST00000614971 IGLV1-40P01703 118 aa2.79□□□□□ -1.96
LTN1-207ENST00000614971 MRGPRG-AS1Q2M3A8 158 aa2.79□□□□□ -1.96
LTN1-207ENST00000614971 hADV29S1A0JD25 119 aa2.78□□□□□ -1.96
LTN1-207ENST00000614971 IGHV4-30-4P0DP06 118 aa2.78□□□□□ -1.96
LTN1-207ENST00000614971 LINC00310P59036 64 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms